Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MIR1289-2-201ENST00000408360 111 ntBASIC2.7□□□□□ -1.98
ERCC3P19447 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.7□□□□□ -1.98
ERCC3P19447 RNU6-693P-201ENST00000516134 107 ntBASIC2.7□□□□□ -1.98
ERCC3P19447 MTND5P41-201ENST00000517498 206 ntBASIC2.7□□□□□ -1.98
ERCC3P19447 MIR6844-201ENST00000637122 62 ntBASIC2.7□□□□□ -1.98
ERCC3P19447 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
ERCC3P19447 MIRLET7C-201ENST00000362160 84 ntBASIC2.69□□□□□ -1.98
ERCC3P19447 Y_RNA.170-201ENST00000363746 110 ntBASIC2.69□□□□□ -1.98
ERCC3P19447 Y_RNA.336-201ENST00000365307 109 ntBASIC2.69□□□□□ -1.98
ERCC3P19447 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.69□□□□□ -1.98
ERCC3P19447 RPS12P2-201ENST00000439728 269 ntBASIC2.69□□□□□ -1.98
ERCC3P19447 MIR514B-201ENST00000516774 80 ntBASIC2.69□□□□□ -1.98
ERCC3P19447 AC015726.2-201ENST00000620112 122 ntBASIC2.69□□□□□ -1.98
ERCC3P19447 MTND1P7-201ENST00000632801 297 ntBASIC2.69□□□□□ -1.98
ERCC3P19447 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
ERCC3P19447 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
ERCC3P19447 SNORD38C-201ENST00000384381 69 ntBASIC2.68□□□□□ -1.98
ERCC3P19447 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
ERCC3P19447 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
ERCC3P19447 SUMO1P3-201ENST00000439961 304 ntBASIC2.68□□□□□ -1.98
ERCC3P19447 DNAJC19P2-201ENST00000593340 302 ntBASIC2.68□□□□□ -1.98
ERCC3P19447 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.68□□□□□ -1.98
ERCC3P19447 AL513423.1-201ENST00000621695 132 ntBASIC2.68□□□□□ -1.98
ERCC3P19447 AC027279.3-201ENST00000625055 122 ntBASIC2.68□□□□□ -1.98
ERCC3P19447 MIR3658-201ENST00000636291 56 ntBASIC2.68□□□□□ -1.98
ERCC3P19447 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
ERCC3P19447 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.67□□□□□ -1.98
ERCC3P19447 AL359851.1-201ENST00000569460 4997 ntBASIC2.67□□□□□ -1.98
ERCC3P19447 RNU6-203P-201ENST00000384038 104 ntBASIC2.67□□□□□ -1.98
ERCC3P19447 RNU6-768P-201ENST00000384683 107 ntBASIC2.67□□□□□ -1.98
ERCC3P19447 MIR1267-201ENST00000408723 78 ntBASIC2.67□□□□□ -1.98
ERCC3P19447 AL356379.1-201ENST00000414105 126 ntBASIC2.67□□□□□ -1.98
ERCC3P19447 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.67□□□□□ -1.98
ERCC3P19447 SNRPGP13-201ENST00000442212 177 ntBASIC2.67□□□□□ -1.98
ERCC3P19447 RNA5SP233-201ENST00000459153 113 ntBASIC2.67□□□□□ -1.98
ERCC3P19447 AC099513.1-201ENST00000490423 301 ntBASIC2.67□□□□□ -1.98
ERCC3P19447 SUMO2P16-201ENST00000519475 264 ntBASIC2.67□□□□□ -1.98
ERCC3P19447 MIR6873-201ENST00000622788 63 ntBASIC2.67□□□□□ -1.98
ERCC3P19447 MIR21-201ENST00000362134 72 ntBASIC2.66□□□□□ -1.98
ERCC3P19447 RNU4-11P-201ENST00000365287 132 ntBASIC2.66□□□□□ -1.98
ERCC3P19447 MIR516B2-201ENST00000385190 85 ntBASIC2.66□□□□□ -1.98
ERCC3P19447 MIR660-201ENST00000385235 97 ntBASIC2.66□□□□□ -1.98
ERCC3P19447 MIR548O-201ENST00000408583 114 ntBASIC2.66□□□□□ -1.98
ERCC3P19447 HMGN2P19-201ENST00000425149 265 ntBASIC2.66□□□□□ -1.98
ERCC3P19447 snoU13.23-201ENST00000458863 104 ntBASIC2.66□□□□□ -1.98
ERCC3P19447 DEFB122-202ENST00000569013 197 ntBASIC2.66□□□□□ -1.98
ERCC3P19447 MIR4713-201ENST00000582691 75 ntBASIC2.66□□□□□ -1.98
ERCC3P19447 MIR5007-201ENST00000583098 95 ntBASIC2.66□□□□□ -1.98
ERCC3P19447 AL365434.2-201ENST00000607979 234 ntBASIC2.66□□□□□ -1.98
ERCC3P19447 AC067747.1-201ENST00000608026 250 ntBASIC2.66□□□□□ -1.98
ERCC3P19447 AC106754.2-201ENST00000623006 233 ntBASIC2.66□□□□□ -1.98
ERCC3P19447 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.98
ERCC3P19447 SNORD114-1-201ENST00000362705 72 ntBASIC2.65□□□□□ -1.99
ERCC3P19447 RNU6-833P-201ENST00000363486 107 ntBASIC2.65□□□□□ -1.99
ERCC3P19447 RNU6-268P-201ENST00000364174 107 ntBASIC2.65□□□□□ -1.99
ERCC3P19447 SNORA25.7-201ENST00000364375 127 ntBASIC2.65□□□□□ -1.99
ERCC3P19447 SNORD61-201ENST00000384252 73 ntBASIC2.65□□□□□ -1.99
ERCC3P19447 MIR676-201ENST00000390702 67 ntBASIC2.65□□□□□ -1.99
ERCC3P19447 MIR764-201ENST00000390811 85 ntBASIC2.65□□□□□ -1.99
ERCC3P19447 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.65□□□□□ -1.99
ERCC3P19447 MIR3133-201ENST00000583157 78 ntBASIC2.65□□□□□ -1.99
ERCC3P19447 Y_RNA.778-201ENST00000620203 90 ntBASIC2.65□□□□□ -1.99
ERCC3P19447 AC005336.3-201ENST00000623833 2679 ntBASIC2.65□□□□□ -1.99
ERCC3P19447 MIR424-201ENST00000362227 98 ntBASIC2.64□□□□□ -1.99
ERCC3P19447 RNA5SP259-201ENST00000365541 109 ntBASIC2.64□□□□□ -1.99
ERCC3P19447 Y_RNA.393-201ENST00000383936 102 ntBASIC2.64□□□□□ -1.99
ERCC3P19447 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
ERCC3P19447 AL603908.1-201ENST00000406098 201 ntBASIC2.64□□□□□ -1.99
ERCC3P19447 RNU6-346P-201ENST00000516288 111 ntBASIC2.64□□□□□ -1.99
ERCC3P19447 RNU6-1212P-201ENST00000517023 104 ntBASIC2.64□□□□□ -1.99
ERCC3P19447 AL160236.1-201ENST00000556317 195 ntBASIC2.64□□□□□ -1.99
ERCC3P19447 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.64□□□□□ -1.99
ERCC3P19447 AL627230.6-201ENST00000611129 280 ntBASIC2.64□□□□□ -1.99
ERCC3P19447 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.64□□□□□ -1.99
ERCC3P19447 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ERCC3P19447 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
ERCC3P19447 RNU6-1336P-201ENST00000383886 109 ntBASIC2.63□□□□□ -1.99
ERCC3P19447 Y_RNA.580-201ENST00000391004 95 ntBASIC2.63□□□□□ -1.99
ERCC3P19447 MIR513C-201ENST00000401352 84 ntBASIC2.63□□□□□ -1.99
ERCC3P19447 AL591806.2-201ENST00000433122 173 ntBASIC2.63□□□□□ -1.99
ERCC3P19447 AC015922.2-201ENST00000435593 184 ntBASIC2.63□□□□□ -1.99
ERCC3P19447 RNU7-25P-201ENST00000516544 62 ntBASIC2.63□□□□□ -1.99
ERCC3P19447 MIR3129-201ENST00000581095 76 ntBASIC2.63□□□□□ -1.99
ERCC3P19447 AC095038.3-201ENST00000634439 195 ntBASIC2.63□□□□□ -1.99
ERCC3P19447 Y_RNA.506-201ENST00000384494 102 ntBASIC2.62□□□□□ -1.99
ERCC3P19447 RNU6-588P-201ENST00000410281 105 ntBASIC2.62□□□□□ -1.99
ERCC3P19447 JTBP1-201ENST00000441314 247 ntBASIC2.62□□□□□ -1.99
ERCC3P19447 AC079804.2-201ENST00000490376 200 ntBASIC2.62□□□□□ -1.99
ERCC3P19447 RNU7-200P-201ENST00000516105 62 ntBASIC2.62□□□□□ -1.99
ERCC3P19447 SNORA18.4-201ENST00000516440 124 ntBASIC2.62□□□□□ -1.99
ERCC3P19447 AC090142.3-201ENST00000519012 385 ntBASIC2.62□□□□□ -1.99
ERCC3P19447 AC015712.3-201ENST00000559380 164 ntBASIC2.62□□□□□ -1.99
ERCC3P19447 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.61□□□□□ -1.99
ERCC3P19447 Y_RNA.66-201ENST00000362862 102 ntBASIC2.61□□□□□ -1.99
ERCC3P19447 RNU6-818P-201ENST00000364837 108 ntBASIC2.61□□□□□ -1.99
ERCC3P19447 MIR452-201ENST00000385020 85 ntBASIC2.61□□□□□ -1.99
ERCC3P19447 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
ERCC3P19447 AC004965.1-201ENST00000413033 213 ntBASIC2.61□□□□□ -1.99
ERCC3P19447 RNU7-121P-201ENST00000516604 62 ntBASIC2.61□□□□□ -1.99
ERCC3P19447 AC006441.5-201ENST00000612680 209 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms