Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AL355297.3-201ENST00000604082 446 ntBASIC1.04□□□□□ -2.24
ERCC2P18074 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
ERCC2P18074 AL391516.1-201ENST00000554380 2449 ntBASIC1.04□□□□□ -2.24
ERCC2P18074 snoU2_19.2-201ENST00000363024 80 ntBASIC1.03□□□□□ -2.24
ERCC2P18074 RNA5SP264-201ENST00000363115 107 ntBASIC1.03□□□□□ -2.24
ERCC2P18074 Y_RNA.202-201ENST00000364083 110 ntBASIC1.03□□□□□ -2.24
ERCC2P18074 RNU4-38P-201ENST00000364472 129 ntBASIC1.03□□□□□ -2.24
ERCC2P18074 RNU6-806P-201ENST00000365147 105 ntBASIC1.03□□□□□ -2.24
ERCC2P18074 RNU6-290P-201ENST00000365212 101 ntBASIC1.03□□□□□ -2.24
ERCC2P18074 MIR215-201ENST00000384858 110 ntBASIC1.03□□□□□ -2.24
ERCC2P18074 RNU6-763P-201ENST00000390865 106 ntBASIC1.03□□□□□ -2.24
ERCC2P18074 RPL21P38-201ENST00000418090 167 ntBASIC1.03□□□□□ -2.24
ERCC2P18074 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.03□□□□□ -2.24
ERCC2P18074 SNORD123-201ENST00000459473 70 ntBASIC1.03□□□□□ -2.24
ERCC2P18074 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.03□□□□□ -2.24
ERCC2P18074 RNU6-1137P-201ENST00000517073 99 ntBASIC1.03□□□□□ -2.24
ERCC2P18074 RPL23AP91-201ENST00000569211 455 ntBASIC1.03□□□□□ -2.24
ERCC2P18074 MIR2681-201ENST00000581814 105 ntBASIC1.03□□□□□ -2.24
ERCC2P18074 AC007742.2-201ENST00000618226 398 ntBASIC1.03□□□□□ -2.24
ERCC2P18074 AL442644.1-201ENST00000454390 3105 ntBASIC1.02□□□□□ -2.25
ERCC2P18074 Y_RNA.26-201ENST00000362539 101 ntBASIC1.02□□□□□ -2.25
ERCC2P18074 SNORA25.3-201ENST00000363205 127 ntBASIC1.02□□□□□ -2.25
ERCC2P18074 RNU6-674P-201ENST00000363831 107 ntBASIC1.02□□□□□ -2.25
ERCC2P18074 RNU6-899P-201ENST00000363947 107 ntBASIC1.02□□□□□ -2.25
ERCC2P18074 Y_RNA.541-201ENST00000384640 113 ntBASIC1.02□□□□□ -2.25
ERCC2P18074 RNU7-90P-201ENST00000459216 62 ntBASIC1.02□□□□□ -2.25
ERCC2P18074 UBL5P1-201ENST00000507979 193 ntBASIC1.02□□□□□ -2.25
ERCC2P18074 RNU7-43P-201ENST00000516554 64 ntBASIC1.02□□□□□ -2.25
ERCC2P18074 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.02□□□□□ -2.25
ERCC2P18074 AC087685.1-201ENST00000587507 141 ntBASIC1.02□□□□□ -2.25
ERCC2P18074 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.02□□□□□ -2.25
ERCC2P18074 MIR8070-201ENST00000616510 88 ntBASIC1.02□□□□□ -2.25
ERCC2P18074 AC012676.2-201ENST00000619258 186 ntBASIC1.02□□□□□ -2.25
ERCC2P18074 Y_RNA.153-201ENST00000363615 91 ntBASIC1.01□□□□□ -2.25
ERCC2P18074 Y_RNA.276-201ENST00000364732 109 ntBASIC1.01□□□□□ -2.25
ERCC2P18074 SNORD114-24-201ENST00000365029 72 ntBASIC1.01□□□□□ -2.25
ERCC2P18074 MIR802-201ENST00000390235 94 ntBASIC1.01□□□□□ -2.25
ERCC2P18074 MTCYBP6-201ENST00000441810 138 ntBASIC1.01□□□□□ -2.25
ERCC2P18074 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.01□□□□□ -2.25
ERCC2P18074 RNU6-1153P-201ENST00000516760 105 ntBASIC1.01□□□□□ -2.25
ERCC2P18074 AP003716.2-201ENST00000528260 108 ntBASIC1.01□□□□□ -2.25
ERCC2P18074 AL512605.2-201ENST00000592972 256 ntBASIC1.01□□□□□ -2.25
ERCC2P18074 MIR103A2-201ENST00000362154 78 ntBASIC1□□□□□ -2.25
ERCC2P18074 Y_RNA.64-201ENST00000362845 102 ntBASIC1□□□□□ -2.25
ERCC2P18074 SNORA25.9-201ENST00000365087 128 ntBASIC1□□□□□ -2.25
ERCC2P18074 RNU6-442P-201ENST00000383968 104 ntBASIC1□□□□□ -2.25
ERCC2P18074 SNORD38C-201ENST00000384381 69 ntBASIC1□□□□□ -2.25
ERCC2P18074 SNORA53-201ENST00000391141 249 ntBASIC1□□□□□ -2.25
ERCC2P18074 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1□□□□□ -2.25
ERCC2P18074 RNU2-31P-201ENST00000516954 155 ntBASIC1□□□□□ -2.25
ERCC2P18074 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
ERCC2P18074 SNORA25.1-201ENST00000362326 128 ntBASIC0.99□□□□□ -2.25
ERCC2P18074 Y_RNA.152-201ENST00000363578 100 ntBASIC0.99□□□□□ -2.25
ERCC2P18074 RNU6-1205P-201ENST00000363625 106 ntBASIC0.99□□□□□ -2.25
ERCC2P18074 Y_RNA.238-201ENST00000364441 102 ntBASIC0.99□□□□□ -2.25
ERCC2P18074 Y_RNA.330-201ENST00000365230 109 ntBASIC0.99□□□□□ -2.25
ERCC2P18074 SNORA33.2-201ENST00000365413 134 ntBASIC0.99□□□□□ -2.25
ERCC2P18074 MIR200A-201ENST00000384875 90 ntBASIC0.99□□□□□ -2.25
ERCC2P18074 MIR1185-1-201ENST00000408598 86 ntBASIC0.99□□□□□ -2.25
ERCC2P18074 SNRPGP14-201ENST00000435400 219 ntBASIC0.99□□□□□ -2.25
ERCC2P18074 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.99□□□□□ -2.25
ERCC2P18074 Y_RNA.637-201ENST00000459424 114 ntBASIC0.99□□□□□ -2.25
ERCC2P18074 AP003733.2-201ENST00000529409 171 ntBASIC0.99□□□□□ -2.25
ERCC2P18074 MIR4661-201ENST00000582720 75 ntBASIC0.99□□□□□ -2.25
ERCC2P18074 AC008507.4-201ENST00000585464 127 ntBASIC0.99□□□□□ -2.25
ERCC2P18074 AC044792.1-201ENST00000593294 196 ntBASIC0.99□□□□□ -2.25
ERCC2P18074 AL020996.3-201ENST00000606617 222 ntBASIC0.99□□□□□ -2.25
ERCC2P18074 AC103810.9-201ENST00000606688 112 ntBASIC0.99□□□□□ -2.25
ERCC2P18074 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.99□□□□□ -2.25
ERCC2P18074 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
ERCC2P18074 RNU6-326P-201ENST00000365480 107 ntBASIC0.98□□□□□ -2.25
ERCC2P18074 SNORA22-201ENST00000383907 134 ntBASIC0.98□□□□□ -2.25
ERCC2P18074 RNU6-639P-201ENST00000384074 107 ntBASIC0.98□□□□□ -2.25
ERCC2P18074 RNU6-514P-201ENST00000384208 107 ntBASIC0.98□□□□□ -2.25
ERCC2P18074 SNORA22C-201ENST00000384614 134 ntBASIC0.98□□□□□ -2.25
ERCC2P18074 SNORD72-201ENST00000390994 80 ntBASIC0.98□□□□□ -2.25
ERCC2P18074 MTND4LP30-201ENST00000454092 297 ntBASIC0.98□□□□□ -2.25
ERCC2P18074 SNORD11-201ENST00000459124 84 ntBASIC0.98□□□□□ -2.25
ERCC2P18074 AC091959.1-201ENST00000495857 238 ntBASIC0.98□□□□□ -2.25
ERCC2P18074 RNU6-1143P-201ENST00000516125 104 ntBASIC0.98□□□□□ -2.25
ERCC2P18074 RNA5SP102-201ENST00000516865 106 ntBASIC0.98□□□□□ -2.25
ERCC2P18074 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.98□□□□□ -2.25
ERCC2P18074 MIR548AR-201ENST00000582191 57 ntBASIC0.98□□□□□ -2.25
ERCC2P18074 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.98□□□□□ -2.25
ERCC2P18074 AC136443.5-201ENST00000603741 370 ntBASIC0.98□□□□□ -2.25
ERCC2P18074 AC037487.3-201ENST00000606668 112 ntBASIC0.98□□□□□ -2.25
ERCC2P18074 AC013791.1-201ENST00000616619 62 ntBASIC0.98□□□□□ -2.25
ERCC2P18074 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
ERCC2P18074 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
ERCC2P18074 Y_RNA.16-201ENST00000362421 102 ntBASIC0.97□□□□□ -2.25
ERCC2P18074 RNU6-1272P-201ENST00000362776 107 ntBASIC0.97□□□□□ -2.25
ERCC2P18074 RNA5SP48-201ENST00000363969 126 ntBASIC0.97□□□□□ -2.25
ERCC2P18074 RNU6-268P-201ENST00000364174 107 ntBASIC0.97□□□□□ -2.25
ERCC2P18074 RNU6-662P-201ENST00000384253 104 ntBASIC0.97□□□□□ -2.25
ERCC2P18074 SNORD28B-201ENST00000390993 75 ntBASIC0.97□□□□□ -2.25
ERCC2P18074 MIR942-201ENST00000401111 86 ntBASIC0.97□□□□□ -2.25
ERCC2P18074 MIR1276-201ENST00000408707 83 ntBASIC0.97□□□□□ -2.25
ERCC2P18074 RNU6-985P-201ENST00000410182 104 ntBASIC0.97□□□□□ -2.25
ERCC2P18074 AC005534.2-201ENST00000431047 433 ntBASIC0.97□□□□□ -2.25
ERCC2P18074 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 216.7 ms