Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AL359634.1-202ENST00000404721 284 ntBASIC-2.55□□□□□ -2.82
VCANP13611 RNU6-1025P-201ENST00000410629 104 ntBASIC-2.55□□□□□ -2.82
VCANP13611 RNU2-34P-201ENST00000516534 121 ntBASIC-2.55□□□□□ -2.82
VCANP13611 VN1R87P-201ENST00000596706 487 ntBASIC-2.55□□□□□ -2.82
VCANP13611 AL358934.1-201ENST00000432346 324 ntBASIC-2.56□□□□□ -2.82
VCANP13611 ZNF114P1-201ENST00000453500 292 ntBASIC-2.56□□□□□ -2.82
VCANP13611 AC068587.5-201ENST00000528506 175 ntBASIC-2.56□□□□□ -2.82
VCANP13611 RPL17P51-201ENST00000605218 238 ntBASIC-2.56□□□□□ -2.82
VCANP13611 AL365338.1-201ENST00000422282 858 ntBASIC-2.56□□□□□ -2.82
VCANP13611 RNU6-740P-201ENST00000364734 105 ntBASIC-2.57□□□□□ -2.82
VCANP13611 MTATP6P18-201ENST00000417994 673 ntBASIC-2.57□□□□□ -2.82
VCANP13611 AC016632.1-201ENST00000503994 196 ntBASIC-2.57□□□□□ -2.82
VCANP13611 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-2.57□□□□□ -2.82
VCANP13611 AC055872.1-201ENST00000570978 278 ntBASIC-2.57□□□□□ -2.82
VCANP13611 AL445523.1-201ENST00000451184 1362 ntBASIC-2.57□□□□□ -2.82
VCANP13611 RNU6-212P-201ENST00000362642 104 ntBASIC-2.57□□□□□ -2.82
VCANP13611 AC090844.1-201ENST00000422019 156 ntBASIC-2.57□□□□□ -2.82
VCANP13611 RNU6-1006P-201ENST00000516998 103 ntBASIC-2.57□□□□□ -2.82
VCANP13611 Y_RNA.80-201ENST00000362996 102 ntBASIC-2.57□□□□□ -2.82
VCANP13611 RPL35AP4-201ENST00000412007 102 ntBASIC-2.57□□□□□ -2.82
VCANP13611 SNORD115-29-201ENST00000362834 82 ntBASIC-2.58□□□□□ -2.82
VCANP13611 SNORD115-11-201ENST00000363616 82 ntBASIC-2.58□□□□□ -2.82
VCANP13611 SNORD115-22-201ENST00000364456 82 ntBASIC-2.58□□□□□ -2.82
VCANP13611 SNORD115-43-201ENST00000365503 82 ntBASIC-2.58□□□□□ -2.82
VCANP13611 SNORD115-36-201ENST00000365629 82 ntBASIC-2.58□□□□□ -2.82
VCANP13611 MTND3P17-201ENST00000416968 344 ntBASIC-2.58□□□□□ -2.82
VCANP13611 AC131281.1-201ENST00000522984 164 ntBASIC-2.58□□□□□ -2.82
VCANP13611 BNIP3P40-201ENST00000596017 556 ntBASIC-2.58□□□□□ -2.82
VCANP13611 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-2.58□□□□□ -2.82
VCANP13611 Y_RNA.539-201ENST00000384635 107 ntBASIC-2.58□□□□□ -2.82
VCANP13611 RNU6-1300P-201ENST00000391046 108 ntBASIC-2.58□□□□□ -2.82
VCANP13611 MIR548O-201ENST00000408583 114 ntBASIC-2.58□□□□□ -2.82
VCANP13611 AC120024.3-201ENST00000603167 156 ntBASIC-2.58□□□□□ -2.82
VCANP13611 AC012213.4-201ENST00000606457 354 ntBASIC-2.58□□□□□ -2.82
VCANP13611 MIR1253-201ENST00000408273 105 ntBASIC-2.59□□□□□ -2.82
VCANP13611 RNU7-14P-201ENST00000459331 62 ntBASIC-2.59□□□□□ -2.82
VCANP13611 MIR4464-201ENST00000580818 92 ntBASIC-2.59□□□□□ -2.82
VCANP13611 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-2.59□□□□□ -2.82
VCANP13611 Z99497.2-201ENST00000603634 310 ntBASIC-2.59□□□□□ -2.82
VCANP13611 AL158042.1-201ENST00000605338 460 ntBASIC-2.59□□□□□ -2.82
VCANP13611 U4.1-201ENST00000620349 87 ntBASIC-2.59□□□□□ -2.82
VCANP13611 AC236972.2-201ENST00000434979 310 ntBASIC-2.59□□□□□ -2.82
VCANP13611 AC116353.2-201ENST00000505332 712 ntBASIC-2.59□□□□□ -2.82
VCANP13611 MTND1P35-201ENST00000526739 508 ntBASIC-2.59□□□□□ -2.82
VCANP13611 Y_RNA.634-201ENST00000364811 113 ntBASIC-2.6□□□□□ -2.82
VCANP13611 RNU6-1186P-201ENST00000410429 97 ntBASIC-2.6□□□□□ -2.82
VCANP13611 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-2.6□□□□□ -2.82
VCANP13611 RNU6-512P-201ENST00000364438 103 ntBASIC-2.6□□□□□ -2.83
VCANP13611 MIR617-201ENST00000385030 97 ntBASIC-2.6□□□□□ -2.83
VCANP13611 AC108059.2-201ENST00000434626 151 ntBASIC-2.6□□□□□ -2.83
VCANP13611 MTCO2P16-201ENST00000436962 677 ntBASIC-2.6□□□□□ -2.83
VCANP13611 AL139418.1-201ENST00000613613 177 ntBASIC-2.6□□□□□ -2.83
VCANP13611 RNU6-1026P-201ENST00000384465 108 ntBASIC-2.6□□□□□ -2.83
VCANP13611 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.6□□□□□ -2.83
VCANP13611 RNU6-1165P-201ENST00000410119 107 ntBASIC-2.6□□□□□ -2.83
VCANP13611 AC013470.1-201ENST00000453438 462 ntBASIC-2.6□□□□□ -2.83
VCANP13611 AL159153.1-201ENST00000619688 317 ntBASIC-2.6□□□□□ -2.83
VCANP13611 Y_RNA.169-201ENST00000363745 96 ntBASIC-2.61□□□□□ -2.83
VCANP13611 Y_RNA.486-201ENST00000384398 107 ntBASIC-2.61□□□□□ -2.83
VCANP13611 RNA5SP245-201ENST00000364239 121 ntBASIC-2.61□□□□□ -2.83
VCANP13611 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-2.61□□□□□ -2.83
VCANP13611 AL136370.1-201ENST00000608166 691 ntBASIC-2.61□□□□□ -2.83
VCANP13611 AC069503.3-201ENST00000618674 145 ntBASIC-2.61□□□□□ -2.83
VCANP13611 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.61□□□□□ -2.83
VCANP13611 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-2.61□□□□□ -2.83
VCANP13611 DISC2.1-201ENST00000612827 205 ntBASIC-2.61□□□□□ -2.83
VCANP13611 RNU6-1266P-201ENST00000362794 105 ntBASIC-2.62□□□□□ -2.83
VCANP13611 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.62□□□□□ -2.83
VCANP13611 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.62□□□□□ -2.83
VCANP13611 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-2.62□□□□□ -2.83
VCANP13611 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-2.62□□□□□ -2.83
VCANP13611 MIR369-201ENST00000362155 70 ntBASIC-2.62□□□□□ -2.83
VCANP13611 Y_RNA.463-201ENST00000384271 102 ntBASIC-2.62□□□□□ -2.83
VCANP13611 MIR363-201ENST00000384840 75 ntBASIC-2.62□□□□□ -2.83
VCANP13611 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-2.62□□□□□ -2.83
VCANP13611 RNU5B-6P-201ENST00000516765 68 ntBASIC-2.62□□□□□ -2.83
VCANP13611 Z94722.1-201ENST00000604328 474 ntBASIC-2.63□□□□□ -2.83
VCANP13611 RNU6-1078P-201ENST00000364522 103 ntBASIC-2.63□□□□□ -2.83
VCANP13611 Z83846.1-201ENST00000446798 265 ntBASIC-2.63□□□□□ -2.83
VCANP13611 MTCO3P39-201ENST00000514812 518 ntBASIC-2.63□□□□□ -2.83
VCANP13611 Y_RNA.797-201ENST00000515977 94 ntBASIC-2.63□□□□□ -2.83
VCANP13611 MTND1P8-201ENST00000571424 950 ntBASIC-2.63□□□□□ -2.83
VCANP13611 AC117470.1-201ENST00000381974 330 ntBASIC-2.63□□□□□ -2.83
VCANP13611 RNU6-840P-201ENST00000517275 65 ntBASIC-2.64□□□□□ -2.83
VCANP13611 Y_RNA.528-201ENST00000384575 108 ntBASIC-2.64□□□□□ -2.83
VCANP13611 MIR549A-201ENST00000385268 96 ntBASIC-2.64□□□□□ -2.83
VCANP13611 MTND1P34-201ENST00000438556 671 ntBASIC-2.64□□□□□ -2.83
VCANP13611 RNU6-927P-201ENST00000516199 100 ntBASIC-2.64□□□□□ -2.83
VCANP13611 RNU7-28P-201ENST00000516759 62 ntBASIC-2.64□□□□□ -2.83
VCANP13611 RNU6-932P-201ENST00000391108 106 ntBASIC-2.65□□□□□ -2.83
VCANP13611 AL008987.1-201ENST00000415528 237 ntBASIC-2.65□□□□□ -2.83
VCANP13611 PIGPP3-201ENST00000425307 415 ntBASIC-2.65□□□□□ -2.83
VCANP13611 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-2.65□□□□□ -2.83
VCANP13611 MIR4753-201ENST00000585119 83 ntBASIC-2.65□□□□□ -2.83
VCANP13611 MIR6888-201ENST00000621977 67 ntBASIC-2.65□□□□□ -2.83
VCANP13611 AC092656.1-203ENST00000624134 423 ntBASIC-2.65□□□□□ -2.83
VCANP13611 Y_RNA.9-201ENST00000362354 101 ntBASIC-2.65□□□□□ -2.83
VCANP13611 RNU6-843P-201ENST00000384454 104 ntBASIC-2.65□□□□□ -2.83
VCANP13611 RNU6-1161P-201ENST00000516176 102 ntBASIC-2.65□□□□□ -2.83
VCANP13611 AC013437.2-201ENST00000639587 677 ntBASIC-2.65□□□□□ -2.83
Retrieved 100 of 98,524 protein–RNA pairs in 248.1 ms