Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 SNORA25.14-201ENST00000516481 132 ntBASIC-0.66□□□□□ -2.51
COL6A3P12111 RNU7-161P-201ENST00000517289 62 ntBASIC-0.66□□□□□ -2.51
COL6A3P12111 MTND1P24-201ENST00000552175 861 ntBASIC-0.66□□□□□ -2.51
COL6A3P12111 SNORD11B-201ENST00000607707 90 ntBASIC-0.66□□□□□ -2.51
COL6A3P12111 AC126544.2-201ENST00000625174 749 ntBASIC-0.66□□□□□ -2.51
COL6A3P12111 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.66□□□□□ -2.52
COL6A3P12111 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.66□□□□□ -2.52
COL6A3P12111 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.66□□□□□ -2.52
COL6A3P12111 RNU2-9P-201ENST00000410194 145 ntBASIC-0.66□□□□□ -2.52
COL6A3P12111 MTND4P3-201ENST00000417829 541 ntBASIC-0.66□□□□□ -2.52
COL6A3P12111 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-0.66□□□□□ -2.52
COL6A3P12111 HMGN2P32-201ENST00000444648 269 ntBASIC-0.66□□□□□ -2.52
COL6A3P12111 RNU7-188P-201ENST00000517063 64 ntBASIC-0.66□□□□□ -2.52
COL6A3P12111 AC004223.4-201ENST00000612426 332 ntBASIC-0.66□□□□□ -2.52
COL6A3P12111 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.66□□□□□ -2.52
COL6A3P12111 AL354950.2-201ENST00000617939 290 ntBASIC-0.66□□□□□ -2.52
COL6A3P12111 AL157770.1-201ENST00000623049 439 ntBASIC-0.66□□□□□ -2.52
COL6A3P12111 AC132825.6-201ENST00000638861 357 ntBASIC-0.66□□□□□ -2.52
COL6A3P12111 SNORA27.1-201ENST00000362604 124 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 MIR320C1-201ENST00000408566 88 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-0.67□□□□□ -2.52
COL6A3P12111 MTATP6P18-201ENST00000417994 673 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 MTATP6P26-201ENST00000445926 662 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 MRPS10P1-201ENST00000448483 130 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 RNU7-74P-201ENST00000459104 62 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 AC018710.1-201ENST00000506509 158 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 RNU6-958P-201ENST00000516995 106 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 SNORA25.17-201ENST00000517184 124 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 MTND1P5-201ENST00000517906 940 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 MIR4423-201ENST00000580922 80 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 AC069545.1-201ENST00000605671 358 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 AL450270.1-201ENST00000606160 391 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 AL512506.1-201ENST00000613918 449 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 SNORA63.5-201ENST00000363548 123 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 RNU6-336P-201ENST00000364891 107 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 U6.112-201ENST00000384129 70 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 RNU6-784P-201ENST00000384330 106 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 USMG5P1-201ENST00000425964 177 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 AC073464.1-201ENST00000429823 534 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 SNRPGP10-201ENST00000432323 225 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 RNU6-323P-201ENST00000521915 107 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.67□□□□□ -2.52
COL6A3P12111 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 RNU5B-1-201ENST00000363286 116 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 SNORD87-201ENST00000364849 89 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 SNORD50B-201ENST00000364995 70 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 RNU6-61P-201ENST00000365528 109 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 SNORA1-201ENST00000384107 130 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.67□□□□□ -2.52
COL6A3P12111 AL512286.1-201ENST00000439244 400 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 AL359672.1-201ENST00000442302 409 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 U8.19-201ENST00000459095 133 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 SNORD123-201ENST00000459473 70 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 AC105417.1-201ENST00000514691 285 ntBASIC-0.67□□□□□ -2.52
COL6A3P12111 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.67□□□□□ -2.52
COL6A3P12111 MIR30D-201ENST00000362283 70 ntBASIC-0.68□□□□□ -2.52
COL6A3P12111 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.68□□□□□ -2.52
COL6A3P12111 Y_RNA.110-201ENST00000363220 99 ntBASIC-0.68□□□□□ -2.52
COL6A3P12111 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.68□□□□□ -2.52
COL6A3P12111 RNU6-190P-201ENST00000384154 102 ntBASIC-0.68□□□□□ -2.52
COL6A3P12111 SNORA20B-201ENST00000384220 132 ntBASIC-0.68□□□□□ -2.52
COL6A3P12111 MIR558-201ENST00000384920 94 ntBASIC-0.68□□□□□ -2.52
COL6A3P12111 MIR320B2-201ENST00000408479 138 ntBASIC-0.68□□□□□ -2.52
COL6A3P12111 RNU4-55P-201ENST00000410731 137 ntBASIC-0.68□□□□□ -2.52
COL6A3P12111 RNU6-607P-201ENST00000411283 108 ntBASIC-0.68□□□□□ -2.52
COL6A3P12111 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.68□□□□□ -2.52
COL6A3P12111 AC098614.3-201ENST00000438957 440 ntBASIC-0.68□□□□□ -2.52
COL6A3P12111 RMST_3.1-201ENST00000611651 109 ntBASIC-0.68□□□□□ -2.52
COL6A3P12111 AC073343.1-201ENST00000328239 651 ntBASIC-0.68□□□□□ -2.52
COL6A3P12111 SNORD115-25-201ENST00000362619 82 ntBASIC-0.68□□□□□ -2.52
COL6A3P12111 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.68□□□□□ -2.52
COL6A3P12111 SNORD115-48-201ENST00000364764 76 ntBASIC-0.68□□□□□ -2.52
COL6A3P12111 RNU4-83P-201ENST00000410863 133 ntBASIC-0.68□□□□□ -2.52
COL6A3P12111 RNA5SP20-201ENST00000515976 84 ntBASIC-0.68□□□□□ -2.52
COL6A3P12111 RNA5SP54-201ENST00000516951 92 ntBASIC-0.68□□□□□ -2.52
COL6A3P12111 HIF1AP1-201ENST00000553642 175 ntBASIC-0.68□□□□□ -2.52
COL6A3P12111 AC115989.2-201ENST00000578640 563 ntBASIC-0.68□□□□□ -2.52
COL6A3P12111 MIR3684-201ENST00000579779 74 ntBASIC-0.68□□□□□ -2.52
COL6A3P12111 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.69□□□□□ -2.52
COL6A3P12111 SNORD115-34-201ENST00000362441 82 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 SNORD115-12-201ENST00000362583 82 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 SNORD115-29-201ENST00000362834 82 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 SNORD115-9-201ENST00000362912 82 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 SNORD115-21-201ENST00000362963 81 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 SNORD115-14-201ENST00000363090 81 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 SNORD115-13-201ENST00000363358 82 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 SNORD115-11-201ENST00000363616 82 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 SNORD115-5-201ENST00000363633 82 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 SNORD115-39-201ENST00000363694 82 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 SNORD115-4-201ENST00000363810 82 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 SNORD115-16-201ENST00000363887 82 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 SNORD115-6-201ENST00000363942 82 ntBASIC-0.69□□□□□ -2.52
COL6A3P12111 RNA5SP245-201ENST00000364239 121 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms