Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC106754.2-201ENST00000623006 233 ntBASIC0.56□□□□□ -2.32
COL11A1P12107 AC067863.3-201ENST00000624172 122 ntBASIC0.56□□□□□ -2.32
COL11A1P12107 AC127459.3-201ENST00000624328 466 ntBASIC0.56□□□□□ -2.32
COL11A1P12107 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
COL11A1P12107 RNU6-442P-201ENST00000383968 104 ntBASIC0.55□□□□□ -2.32
COL11A1P12107 RNU6-708P-201ENST00000384217 107 ntBASIC0.55□□□□□ -2.32
COL11A1P12107 RNU6-136P-201ENST00000384663 107 ntBASIC0.55□□□□□ -2.32
COL11A1P12107 SNORD115-46-201ENST00000390982 71 ntBASIC0.55□□□□□ -2.32
COL11A1P12107 MIR1302-11-201ENST00000408051 138 ntBASIC0.55□□□□□ -2.32
COL11A1P12107 MIR1302-9-201ENST00000408365 138 ntBASIC0.55□□□□□ -2.32
COL11A1P12107 MIR1302-10-201ENST00000408734 138 ntBASIC0.55□□□□□ -2.32
COL11A1P12107 RNU6-121P-201ENST00000410525 99 ntBASIC0.55□□□□□ -2.32
COL11A1P12107 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.55□□□□□ -2.32
COL11A1P12107 LINC01399-202ENST00000458450 244 ntBASIC0.55□□□□□ -2.32
COL11A1P12107 RPL23AP54-201ENST00000495129 419 ntBASIC0.55□□□□□ -2.32
COL11A1P12107 MRPS35P2-201ENST00000508242 191 ntBASIC0.55□□□□□ -2.32
COL11A1P12107 RNU6-475P-201ENST00000516073 104 ntBASIC0.55□□□□□ -2.32
COL11A1P12107 SNORD116.3-201ENST00000517176 78 ntBASIC0.55□□□□□ -2.32
COL11A1P12107 AC020661.2-201ENST00000560114 134 ntBASIC0.55□□□□□ -2.32
COL11A1P12107 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.55□□□□□ -2.32
COL11A1P12107 AL357312.1-201ENST00000603879 298 ntBASIC0.55□□□□□ -2.32
COL11A1P12107 MIR1302-2-201ENST00000607096 138 ntBASIC0.55□□□□□ -2.32
COL11A1P12107 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
COL11A1P12107 Y_RNA.11-201ENST00000362375 109 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 SNORD81.1-201ENST00000363064 77 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 snoU2-30.1-201ENST00000365012 70 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 SNORD63-201ENST00000384262 68 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 MIR660-201ENST00000385235 97 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
COL11A1P12107 RNU6-131P-201ENST00000391144 107 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 RNA5SP63-201ENST00000391225 112 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 RNU6-985P-201ENST00000410182 104 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.54□□□□□ -2.32
COL11A1P12107 SNX2P2-201ENST00000424553 323 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 MRPS10P1-201ENST00000448483 130 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 MTND4LP30-201ENST00000454092 297 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 RPL39P38-201ENST00000467018 153 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 AL133373.1-201ENST00000497098 94 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 RNU6-322P-201ENST00000516010 103 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 RNU7-40P-201ENST00000516397 64 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 SNORA31.10-201ENST00000516482 106 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 RNU7-110P-201ENST00000516891 62 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 RNU7-116P-201ENST00000516940 62 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.54□□□□□ -2.32
COL11A1P12107 MIR3145-201ENST00000580727 82 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 MIR4661-201ENST00000582720 75 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 MIR4653-201ENST00000585107 83 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 AL022345.2-201ENST00000606307 135 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 JPX_2.1-201ENST00000614161 69 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 Pinc.1-201ENST00000616452 154 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
COL11A1P12107 Y_RNA.28-201ENST00000362554 111 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 Y_RNA.44-201ENST00000362676 108 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 Y_RNA.158-201ENST00000363651 101 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 RNU6-738P-201ENST00000384531 106 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 Y_RNA.541-201ENST00000384640 113 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 RNU6-21P-201ENST00000384710 107 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 AL451046.2-201ENST00000403074 277 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 MIR1912-201ENST00000410389 80 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 RNU6-733P-201ENST00000410759 104 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 MLLT10P1-201ENST00000418346 262 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 ELOCP20-201ENST00000422460 345 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 AC245047.7-201ENST00000440265 293 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 AL731563.1-201ENST00000442202 214 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.54□□□□□ -2.32
COL11A1P12107 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.54□□□□□ -2.32
COL11A1P12107 AC048334.1-201ENST00000477975 159 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.54□□□□□ -2.32
COL11A1P12107 AP003072.1-201ENST00000531740 145 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 AC113195.1-201ENST00000579952 141 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 MIR4514-201ENST00000581410 57 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 RPS29P30-201ENST00000600975 111 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 AC124312.5-201ENST00000604451 268 ntBASIC0.54□□□□□ -2.32
COL11A1P12107 RNA5SP331-201ENST00000364986 107 ntBASIC0.53□□□□□ -2.32
COL11A1P12107 RNU6-144P-201ENST00000383951 107 ntBASIC0.53□□□□□ -2.32
COL11A1P12107 RNU6-439P-201ENST00000384188 106 ntBASIC0.53□□□□□ -2.32
COL11A1P12107 SNORD38C-201ENST00000384381 69 ntBASIC0.53□□□□□ -2.32
COL11A1P12107 Y_RNA.526-201ENST00000384572 110 ntBASIC0.53□□□□□ -2.32
COL11A1P12107 MIR136-201ENST00000385207 82 ntBASIC0.53□□□□□ -2.32
COL11A1P12107 AL034345.1-201ENST00000407768 123 ntBASIC0.53□□□□□ -2.32
COL11A1P12107 MIR1278-201ENST00000408753 81 ntBASIC0.53□□□□□ -2.32
COL11A1P12107 AL606490.4-201ENST00000423117 127 ntBASIC0.53□□□□□ -2.32
COL11A1P12107 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.53□□□□□ -2.32
COL11A1P12107 RPL39P39-201ENST00000455840 151 ntBASIC0.53□□□□□ -2.32
COL11A1P12107 U8.19-201ENST00000459095 133 ntBASIC0.53□□□□□ -2.32
COL11A1P12107 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.53□□□□□ -2.32
COL11A1P12107 SNORA31.4-201ENST00000516049 129 ntBASIC0.53□□□□□ -2.32
COL11A1P12107 RNU6-1153P-201ENST00000516760 105 ntBASIC0.53□□□□□ -2.32
COL11A1P12107 AP003733.2-201ENST00000529409 171 ntBASIC0.53□□□□□ -2.32
COL11A1P12107 AP003327.1-201ENST00000529684 127 ntBASIC0.53□□□□□ -2.32
COL11A1P12107 AC136932.1-201ENST00000574771 208 ntBASIC0.53□□□□□ -2.32
COL11A1P12107 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.53□□□□□ -2.32
COL11A1P12107 AL591926.4-201ENST00000616895 298 ntBASIC0.53□□□□□ -2.32
COL11A1P12107 SNORD113-8-201ENST00000363497 74 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 Y_RNA.148-201ENST00000363557 117 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 RNU6-674P-201ENST00000363831 107 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 RNU6-770P-201ENST00000363929 105 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 RNA5SP259-201ENST00000365541 109 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 Y_RNA.370-201ENST00000365589 108 ntBASIC0.52□□□□□ -2.33
COL11A1P12107 Y_RNA.389-201ENST00000383924 113 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms