Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1□□□□□ -2.25
KRT3P12035 RNU1-124P-201ENST00000363861 145 ntBASIC1□□□□□ -2.25
KRT3P12035 RNU6-662P-201ENST00000384253 104 ntBASIC1□□□□□ -2.25
KRT3P12035 SNORA80D-201ENST00000384488 135 ntBASIC1□□□□□ -2.25
KRT3P12035 RNU6-383P-201ENST00000410864 94 ntBASIC1□□□□□ -2.25
KRT3P12035 RNU6-321P-201ENST00000410912 106 ntBASIC1□□□□□ -2.25
KRT3P12035 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1□□□□□ -2.25
KRT3P12035 AC063976.4-201ENST00000421971 163 ntBASIC1□□□□□ -2.25
KRT3P12035 SNORD123-201ENST00000459473 70 ntBASIC1□□□□□ -2.25
KRT3P12035 RNU2-31P-201ENST00000516954 155 ntBASIC1□□□□□ -2.25
KRT3P12035 Y_RNA.14-201ENST00000362415 103 ntBASIC0.99□□□□□ -2.25
KRT3P12035 Y_RNA.26-201ENST00000362539 101 ntBASIC0.99□□□□□ -2.25
KRT3P12035 Y_RNA.222-201ENST00000364264 102 ntBASIC0.99□□□□□ -2.25
KRT3P12035 RNU6-290P-201ENST00000365212 101 ntBASIC0.99□□□□□ -2.25
KRT3P12035 Y_RNA.363-201ENST00000365529 113 ntBASIC0.99□□□□□ -2.25
KRT3P12035 RNU6-639P-201ENST00000384074 107 ntBASIC0.99□□□□□ -2.25
KRT3P12035 Y_RNA.541-201ENST00000384640 113 ntBASIC0.99□□□□□ -2.25
KRT3P12035 MIR15B-201ENST00000385045 98 ntBASIC0.99□□□□□ -2.25
KRT3P12035 RPS23P4-201ENST00000487908 423 ntBASIC0.99□□□□□ -2.25
KRT3P12035 RNU6-1053P-201ENST00000515930 101 ntBASIC0.99□□□□□ -2.25
KRT3P12035 SNORD116-28-201ENST00000516123 91 ntBASIC0.99□□□□□ -2.25
KRT3P12035 RNU6-1007P-201ENST00000516586 107 ntBASIC0.99□□□□□ -2.25
KRT3P12035 RNU6-1137P-201ENST00000517073 99 ntBASIC0.99□□□□□ -2.25
KRT3P12035 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.99□□□□□ -2.25
KRT3P12035 AP003733.2-201ENST00000529409 171 ntBASIC0.99□□□□□ -2.25
KRT3P12035 MIR4764-201ENST00000580680 88 ntBASIC0.99□□□□□ -2.25
KRT3P12035 AL355297.3-201ENST00000604082 446 ntBASIC0.99□□□□□ -2.25
KRT3P12035 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
KRT3P12035 AC015726.2-201ENST00000620112 122 ntBASIC0.99□□□□□ -2.25
KRT3P12035 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.98□□□□□ -2.25
KRT3P12035 snoU2_19.2-201ENST00000363024 80 ntBASIC0.98□□□□□ -2.25
KRT3P12035 MIR570-201ENST00000384917 97 ntBASIC0.98□□□□□ -2.25
KRT3P12035 Y_RNA.581-201ENST00000391017 97 ntBASIC0.98□□□□□ -2.25
KRT3P12035 BTF3P11-201ENST00000426582 477 ntBASIC0.98□□□□□ -2.25
KRT3P12035 AC002429.1-201ENST00000437672 148 ntBASIC0.98□□□□□ -2.25
KRT3P12035 MTND5P22-201ENST00000458380 195 ntBASIC0.98□□□□□ -2.25
KRT3P12035 NDUFA4P2-201ENST00000489989 244 ntBASIC0.98□□□□□ -2.25
KRT3P12035 RNU7-41P-201ENST00000515917 61 ntBASIC0.98□□□□□ -2.25
KRT3P12035 SNORD79.1-201ENST00000516069 84 ntBASIC0.98□□□□□ -2.25
KRT3P12035 RNU6-570P-201ENST00000517051 105 ntBASIC0.98□□□□□ -2.25
KRT3P12035 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.98□□□□□ -2.25
KRT3P12035 AL391516.1-201ENST00000554380 2449 ntBASIC0.97□□□□□ -2.25
KRT3P12035 MIR103A2-201ENST00000362154 78 ntBASIC0.97□□□□□ -2.25
KRT3P12035 Y_RNA.16-201ENST00000362421 102 ntBASIC0.97□□□□□ -2.25
KRT3P12035 Y_RNA.136-201ENST00000363444 102 ntBASIC0.97□□□□□ -2.25
KRT3P12035 SNORD72-201ENST00000390994 80 ntBASIC0.97□□□□□ -2.25
KRT3P12035 AC005534.2-201ENST00000431047 433 ntBASIC0.97□□□□□ -2.25
KRT3P12035 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.97□□□□□ -2.25
KRT3P12035 AC245047.8-201ENST00000456455 284 ntBASIC0.97□□□□□ -2.25
KRT3P12035 AC091959.1-201ENST00000495857 238 ntBASIC0.97□□□□□ -2.25
KRT3P12035 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.97□□□□□ -2.25
KRT3P12035 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.97□□□□□ -2.25
KRT3P12035 MIR367-201ENST00000362299 68 ntBASIC0.96□□□□□ -2.26
KRT3P12035 RNU6-674P-201ENST00000363831 107 ntBASIC0.96□□□□□ -2.26
KRT3P12035 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
KRT3P12035 SNORA33.2-201ENST00000365413 134 ntBASIC0.96□□□□□ -2.26
KRT3P12035 SNORA75.2-201ENST00000391138 150 ntBASIC0.96□□□□□ -2.26
KRT3P12035 SNORA75.3-201ENST00000391231 150 ntBASIC0.96□□□□□ -2.26
KRT3P12035 SNORD124-201ENST00000459577 104 ntBASIC0.96□□□□□ -2.26
KRT3P12035 RNU6-1143P-201ENST00000516125 104 ntBASIC0.96□□□□□ -2.26
KRT3P12035 AC023827.1-201ENST00000569247 97 ntBASIC0.96□□□□□ -2.26
KRT3P12035 AC087685.1-201ENST00000587507 141 ntBASIC0.96□□□□□ -2.26
KRT3P12035 Pinc.1-201ENST00000616452 154 ntBASIC0.96□□□□□ -2.26
KRT3P12035 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
KRT3P12035 RNA5SP264-201ENST00000363115 107 ntBASIC0.95□□□□□ -2.26
KRT3P12035 RNY1P10-201ENST00000363268 113 ntBASIC0.95□□□□□ -2.26
KRT3P12035 RNU6-268P-201ENST00000364174 107 ntBASIC0.95□□□□□ -2.26
KRT3P12035 MIR532-201ENST00000385025 91 ntBASIC0.95□□□□□ -2.26
KRT3P12035 MIR942-201ENST00000401111 86 ntBASIC0.95□□□□□ -2.26
KRT3P12035 AC113618.1-201ENST00000416747 285 ntBASIC0.95□□□□□ -2.26
KRT3P12035 RNU7-90P-201ENST00000459216 62 ntBASIC0.95□□□□□ -2.26
KRT3P12035 Y_RNA.637-201ENST00000459424 114 ntBASIC0.95□□□□□ -2.26
KRT3P12035 RNU7-43P-201ENST00000516554 64 ntBASIC0.95□□□□□ -2.26
KRT3P12035 RNU7-181P-201ENST00000517234 74 ntBASIC0.95□□□□□ -2.26
KRT3P12035 MIR548AR-201ENST00000582191 57 ntBASIC0.95□□□□□ -2.26
KRT3P12035 AC008507.4-201ENST00000585464 127 ntBASIC0.95□□□□□ -2.26
KRT3P12035 AL049861.1-201ENST00000603130 150 ntBASIC0.95□□□□□ -2.26
KRT3P12035 AL391903.3-201ENST00000612158 163 ntBASIC0.95□□□□□ -2.26
KRT3P12035 AC013791.1-201ENST00000616619 62 ntBASIC0.95□□□□□ -2.26
KRT3P12035 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.95□□□□□ -2.26
KRT3P12035 Y_RNA.11-201ENST00000362375 109 ntBASIC0.94□□□□□ -2.26
KRT3P12035 RNU6-238P-201ENST00000363313 106 ntBASIC0.94□□□□□ -2.26
KRT3P12035 Y_RNA.153-201ENST00000363615 91 ntBASIC0.94□□□□□ -2.26
KRT3P12035 RNU6-326P-201ENST00000365480 107 ntBASIC0.94□□□□□ -2.26
KRT3P12035 RNU6-144P-201ENST00000383951 107 ntBASIC0.94□□□□□ -2.26
KRT3P12035 SNORD28B-201ENST00000390993 75 ntBASIC0.94□□□□□ -2.26
KRT3P12035 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.94□□□□□ -2.26
KRT3P12035 MTND4LP30-201ENST00000454092 297 ntBASIC0.94□□□□□ -2.26
KRT3P12035 snoU13.25-201ENST00000458945 104 ntBASIC0.94□□□□□ -2.26
KRT3P12035 ACA64.5-201ENST00000516207 127 ntBASIC0.94□□□□□ -2.26
KRT3P12035 DEFB108E-201ENST00000524692 240 ntBASIC0.94□□□□□ -2.26
KRT3P12035 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.94□□□□□ -2.26
KRT3P12035 MIR5692C2-201ENST00000577959 77 ntBASIC0.94□□□□□ -2.26
KRT3P12035 MIR4724-201ENST00000579485 89 ntBASIC0.94□□□□□ -2.26
KRT3P12035 MIR4661-201ENST00000582720 75 ntBASIC0.94□□□□□ -2.26
KRT3P12035 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.94□□□□□ -2.26
KRT3P12035 AC012433.1-201ENST00000588916 398 ntBASIC0.94□□□□□ -2.26
KRT3P12035 AC006006.1-201ENST00000603082 144 ntBASIC0.94□□□□□ -2.26
KRT3P12035 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.93□□□□□ -2.26
KRT3P12035 MIR337-201ENST00000362281 93 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms