Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 SNORA1.2-201ENST00000365189 134 ntBASIC-3.24□□□□□ -2.93
TOP2AP11388 RNU6-1246P-201ENST00000391064 107 ntBASIC-3.24□□□□□ -2.93
TOP2AP11388 RNU6-602P-201ENST00000411155 105 ntBASIC-3.24□□□□□ -2.93
TOP2AP11388 AC119751.4-201ENST00000507498 357 ntBASIC-3.24□□□□□ -2.93
TOP2AP11388 RNU6-830P-201ENST00000516353 107 ntBASIC-3.24□□□□□ -2.93
TOP2AP11388 AP000907.4-201ENST00000604143 237 ntBASIC-3.24□□□□□ -2.93
TOP2AP11388 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-3.24□□□□□ -2.93
TOP2AP11388 SNORD38C-201ENST00000384381 69 ntBASIC-3.24□□□□□ -2.93
TOP2AP11388 MTCO2P27-201ENST00000420740 428 ntBASIC-3.24□□□□□ -2.93
TOP2AP11388 HMGN2P32-201ENST00000444648 269 ntBASIC-3.24□□□□□ -2.93
TOP2AP11388 MIR3920-201ENST00000581751 86 ntBASIC-3.24□□□□□ -2.93
TOP2AP11388 AC012467.1-201ENST00000607740 256 ntBASIC-3.24□□□□□ -2.93
TOP2AP11388 Y_RNA.175-201ENST00000363794 111 ntBASIC-3.25□□□□□ -2.93
TOP2AP11388 RNU6-324P-201ENST00000363957 106 ntBASIC-3.25□□□□□ -2.93
TOP2AP11388 Y_RNA.482-201ENST00000384377 111 ntBASIC-3.25□□□□□ -2.93
TOP2AP11388 Y_RNA.504-201ENST00000384481 104 ntBASIC-3.25□□□□□ -2.93
TOP2AP11388 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-3.25□□□□□ -2.93
TOP2AP11388 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-3.25□□□□□ -2.93
TOP2AP11388 MIR4293-201ENST00000584305 78 ntBASIC-3.25□□□□□ -2.93
TOP2AP11388 AL121757.2-201ENST00000611223 313 ntBASIC-3.25□□□□□ -2.93
TOP2AP11388 Y_RNA.564-201ENST00000384708 106 ntBASIC-3.26□□□□□ -2.93
TOP2AP11388 Y_RNA.221-201ENST00000364248 96 ntBASIC-3.27□□□□□ -2.93
TOP2AP11388 SNORD50B-201ENST00000364995 70 ntBASIC-3.27□□□□□ -2.93
TOP2AP11388 RNU6-609P-201ENST00000365459 107 ntBASIC-3.27□□□□□ -2.93
TOP2AP11388 MTATP6P18-201ENST00000417994 673 ntBASIC-3.27□□□□□ -2.93
TOP2AP11388 AC069113.1-201ENST00000517763 267 ntBASIC-3.27□□□□□ -2.93
TOP2AP11388 TARS-215ENST00000626210 201 ntTSL 5 BASIC-3.27□□□□□ -2.93
TOP2AP11388 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-3.27□□□□□ -2.93
TOP2AP11388 Y_RNA.212-201ENST00000364177 102 ntBASIC-3.28□□□□□ -2.93
TOP2AP11388 Y_RNA.400-201ENST00000383963 111 ntBASIC-3.28□□□□□ -2.93
TOP2AP11388 Y_RNA.785-201ENST00000384290 109 ntBASIC-3.28□□□□□ -2.93
TOP2AP11388 RNU6-592P-201ENST00000411333 103 ntBASIC-3.28□□□□□ -2.93
TOP2AP11388 AC096949.1-201ENST00000412047 152 ntBASIC-3.28□□□□□ -2.93
TOP2AP11388 AC127455.1-201ENST00000565496 145 ntBASIC-3.28□□□□□ -2.93
TOP2AP11388 Y_RNA.231-201ENST00000364358 102 ntBASIC-3.29□□□□□ -2.94
TOP2AP11388 MIR652-201ENST00000385278 98 ntBASIC-3.29□□□□□ -2.94
TOP2AP11388 RNU6-400P-201ENST00000391173 106 ntBASIC-3.29□□□□□ -2.94
TOP2AP11388 AC093423.1-201ENST00000440817 142 ntBASIC-3.29□□□□□ -2.94
TOP2AP11388 RNU6-64P-201ENST00000517119 105 ntBASIC-3.29□□□□□ -2.94
TOP2AP11388 AC090616.2-202ENST00000584248 222 ntBASIC-3.29□□□□□ -2.94
TOP2AP11388 AC008873.1-201ENST00000625051 138 ntBASIC-3.29□□□□□ -2.94
TOP2AP11388 RNY3P11-201ENST00000364153 102 ntBASIC-3.29□□□□□ -2.94
TOP2AP11388 SNORA62.4-201ENST00000365504 151 ntBASIC-3.29□□□□□ -2.94
TOP2AP11388 MIR421-201ENST00000365696 85 ntBASIC-3.29□□□□□ -2.94
TOP2AP11388 MIR522-201ENST00000385071 87 ntBASIC-3.29□□□□□ -2.94
TOP2AP11388 SNORA26.4-201ENST00000391188 123 ntBASIC-3.29□□□□□ -2.94
TOP2AP11388 RNU6-329P-201ENST00000459618 107 ntBASIC-3.29□□□□□ -2.94
TOP2AP11388 MTCO2P6-201ENST00000463134 685 ntBASIC-3.29□□□□□ -2.94
TOP2AP11388 RNY3P4-201ENST00000384428 101 ntBASIC-3.3□□□□□ -2.94
TOP2AP11388 RNY3P9-201ENST00000384727 106 ntBASIC-3.3□□□□□ -2.94
TOP2AP11388 MTCO2P16-201ENST00000436962 677 ntBASIC-3.3□□□□□ -2.94
TOP2AP11388 AC010598.1-201ENST00000510378 103 ntBASIC-3.3□□□□□ -2.94
TOP2AP11388 RNU6-377P-201ENST00000515965 102 ntBASIC-3.3□□□□□ -2.94
TOP2AP11388 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-3.3□□□□□ -2.94
TOP2AP11388 snoU2_19.2-201ENST00000363024 80 ntBASIC-3.31□□□□□ -2.94
TOP2AP11388 Y_RNA.182-201ENST00000363880 111 ntBASIC-3.31□□□□□ -2.94
TOP2AP11388 Y_RNA.211-201ENST00000364164 101 ntBASIC-3.31□□□□□ -2.94
TOP2AP11388 RNU5E-6P-201ENST00000365574 115 ntBASIC-3.31□□□□□ -2.94
TOP2AP11388 RNU6-677P-201ENST00000516914 101 ntBASIC-3.31□□□□□ -2.94
TOP2AP11388 AC174048.1-201ENST00000603389 144 ntBASIC-3.31□□□□□ -2.94
TOP2AP11388 U4.1-201ENST00000620349 87 ntBASIC-3.31□□□□□ -2.94
TOP2AP11388 RNU6-168P-201ENST00000516189 101 ntBASIC-3.32□□□□□ -2.94
TOP2AP11388 RNU6-386P-201ENST00000362650 107 ntBASIC-3.33□□□□□ -2.94
TOP2AP11388 Y_RNA.634-201ENST00000364811 113 ntBASIC-3.33□□□□□ -2.94
TOP2AP11388 Y_RNA.323-201ENST00000365157 109 ntBASIC-3.33□□□□□ -2.94
TOP2AP11388 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-3.33□□□□□ -2.94
TOP2AP11388 FGF7P6-202ENST00000451282 293 ntBASIC-3.33□□□□□ -2.94
TOP2AP11388 MIR4460-201ENST00000577862 86 ntBASIC-3.33□□□□□ -2.94
TOP2AP11388 AL049861.1-201ENST00000603130 150 ntBASIC-3.33□□□□□ -2.94
TOP2AP11388 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-3.34□□□□□ -2.94
TOP2AP11388 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-3.34□□□□□ -2.94
TOP2AP11388 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC-3.34□□□□□ -2.94
TOP2AP11388 MTATP6P13-201ENST00000438531 667 ntBASIC-3.34□□□□□ -2.94
TOP2AP11388 MIR4308-201ENST00000580634 81 ntBASIC-3.34□□□□□ -2.94
TOP2AP11388 AL121655.1-201ENST00000605811 308 ntBASIC-3.34□□□□□ -2.94
TOP2AP11388 SNORD75.2-201ENST00000408784 58 ntBASIC-3.34□□□□□ -2.94
TOP2AP11388 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-3.34□□□□□ -2.94
TOP2AP11388 RNU7-67P-201ENST00000459003 62 ntBASIC-3.34□□□□□ -2.94
TOP2AP11388 MTATP6P2-201ENST00000603319 678 ntBASIC-3.34□□□□□ -2.94
TOP2AP11388 AL450270.1-201ENST00000606160 391 ntBASIC-3.34□□□□□ -2.94
TOP2AP11388 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-3.34□□□□□ -2.94
TOP2AP11388 AL445264.1-201ENST00000621719 171 ntBASIC-3.34□□□□□ -2.94
TOP2AP11388 Y_RNA.14-201ENST00000362415 103 ntBASIC-3.35□□□□□ -2.95
TOP2AP11388 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-3.35□□□□□ -2.95
TOP2AP11388 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-3.35□□□□□ -2.95
TOP2AP11388 MIR548AY-201ENST00000617669 107 ntBASIC-3.35□□□□□ -2.95
TOP2AP11388 MIR1322-201ENST00000638013 71 ntBASIC-3.35□□□□□ -2.95
TOP2AP11388 SNORD115-34-201ENST00000362441 82 ntBASIC-3.36□□□□□ -2.95
TOP2AP11388 AC114878.1-201ENST00000441166 358 ntBASIC-3.36□□□□□ -2.95
TOP2AP11388 Y_RNA.689-201ENST00000516589 107 ntBASIC-3.36□□□□□ -2.95
TOP2AP11388 RNU6-344P-201ENST00000516635 111 ntBASIC-3.36□□□□□ -2.95
TOP2AP11388 RNU6-958P-201ENST00000516995 106 ntBASIC-3.36□□□□□ -2.95
TOP2AP11388 AC008507.2-201ENST00000588402 1176 ntBASIC-3.36□□□□□ -2.95
TOP2AP11388 RNU6-136P-201ENST00000384663 107 ntBASIC-3.37□□□□□ -2.95
TOP2AP11388 MIR626-201ENST00000385032 94 ntBASIC-3.37□□□□□ -2.95
TOP2AP11388 ELOCP20-201ENST00000422460 345 ntBASIC-3.37□□□□□ -2.95
TOP2AP11388 RNU4-55P-201ENST00000410731 137 ntBASIC-3.38□□□□□ -2.95
TOP2AP11388 RNU6-1190P-201ENST00000410811 104 ntBASIC-3.38□□□□□ -2.95
TOP2AP11388 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-3.38□□□□□ -2.95
TOP2AP11388 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-3.38□□□□□ -2.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms