Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 AC113410.1-201ENST00000505029 247 ntBASIC0.54□□□□□ -2.32
IGHV3-43DP0DP04 SEPT14P8-201ENST00000508026 178 ntBASIC0.54□□□□□ -2.32
IGHV3-43DP0DP04 RNU6-830P-201ENST00000516353 107 ntBASIC0.54□□□□□ -2.32
IGHV3-43DP0DP04 RNU6-1007P-201ENST00000516586 107 ntBASIC0.54□□□□□ -2.32
IGHV3-43DP0DP04 AC005357.1-201ENST00000588399 301 ntBASIC0.54□□□□□ -2.32
IGHV3-43DP0DP04 AC136443.5-201ENST00000603741 370 ntBASIC0.54□□□□□ -2.32
IGHV3-43DP0DP04 SNORD113-5-201ENST00000607261 78 ntBASIC0.54□□□□□ -2.32
IGHV3-43DP0DP04 PART1_1.1-201ENST00000611761 217 ntBASIC0.54□□□□□ -2.32
IGHV3-43DP0DP04 AL136317.1-201ENST00000612653 226 ntBASIC0.54□□□□□ -2.32
IGHV3-43DP0DP04 AC015726.2-201ENST00000620112 122 ntBASIC0.54□□□□□ -2.32
IGHV3-43DP0DP04 RNU6-674P-201ENST00000363831 107 ntBASIC0.53□□□□□ -2.32
IGHV3-43DP0DP04 Y_RNA.197-201ENST00000364004 102 ntBASIC0.53□□□□□ -2.32
IGHV3-43DP0DP04 SNORD113.3-201ENST00000364630 78 ntBASIC0.53□□□□□ -2.32
IGHV3-43DP0DP04 Y_RNA.813-201ENST00000364639 102 ntBASIC0.53□□□□□ -2.32
IGHV3-43DP0DP04 SNORD114-22-201ENST00000365423 72 ntBASIC0.53□□□□□ -2.32
IGHV3-43DP0DP04 SNORA2B-201ENST00000384583 137 ntBASIC0.53□□□□□ -2.32
IGHV3-43DP0DP04 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.53□□□□□ -2.32
IGHV3-43DP0DP04 RNU6-130P-201ENST00000411112 103 ntBASIC0.53□□□□□ -2.32
IGHV3-43DP0DP04 RPS29P1-201ENST00000465274 159 ntBASIC0.53□□□□□ -2.32
IGHV3-43DP0DP04 MTND3P22-201ENST00000510932 243 ntBASIC0.53□□□□□ -2.32
IGHV3-43DP0DP04 RNU6-475P-201ENST00000516073 104 ntBASIC0.53□□□□□ -2.32
IGHV3-43DP0DP04 RNU6-1110P-201ENST00000516462 101 ntBASIC0.53□□□□□ -2.32
IGHV3-43DP0DP04 MIR2115-201ENST00000516657 100 ntBASIC0.53□□□□□ -2.32
IGHV3-43DP0DP04 AC004812.1-201ENST00000540773 146 ntBASIC0.53□□□□□ -2.32
IGHV3-43DP0DP04 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.53□□□□□ -2.32
IGHV3-43DP0DP04 AC012433.1-201ENST00000588916 398 ntBASIC0.53□□□□□ -2.32
IGHV3-43DP0DP04 AL590095.2-201ENST00000604136 117 ntBASIC0.53□□□□□ -2.32
IGHV3-43DP0DP04 AC007485.1-201ENST00000616755 206 ntBASIC0.53□□□□□ -2.32
IGHV3-43DP0DP04 Y_RNA.164-201ENST00000363709 102 ntBASIC0.52□□□□□ -2.33
IGHV3-43DP0DP04 SNORA51.10-201ENST00000384418 136 ntBASIC0.52□□□□□ -2.33
IGHV3-43DP0DP04 RNU6-110P-201ENST00000384508 104 ntBASIC0.52□□□□□ -2.33
IGHV3-43DP0DP04 SNORD72-201ENST00000390994 80 ntBASIC0.52□□□□□ -2.33
IGHV3-43DP0DP04 MIR1276-201ENST00000408707 83 ntBASIC0.52□□□□□ -2.33
IGHV3-43DP0DP04 RNA5SP95-201ENST00000410319 137 ntBASIC0.52□□□□□ -2.33
IGHV3-43DP0DP04 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.52□□□□□ -2.33
IGHV3-43DP0DP04 RNU7-181P-201ENST00000517234 74 ntBASIC0.52□□□□□ -2.33
IGHV3-43DP0DP04 AC133485.1-201ENST00000567176 124 ntBASIC0.52□□□□□ -2.33
IGHV3-43DP0DP04 AC138907.6-201ENST00000568401 126 ntBASIC0.52□□□□□ -2.33
IGHV3-43DP0DP04 MIR4801-201ENST00000582704 82 ntBASIC0.52□□□□□ -2.33
IGHV3-43DP0DP04 MIR4795-201ENST00000584182 89 ntBASIC0.52□□□□□ -2.33
IGHV3-43DP0DP04 AC104695.3-201ENST00000604052 296 ntBASIC0.52□□□□□ -2.33
IGHV3-43DP0DP04 RNU4-73P-201ENST00000363164 141 ntBASIC0.51□□□□□ -2.33
IGHV3-43DP0DP04 RNU6-801P-201ENST00000364087 105 ntBASIC0.51□□□□□ -2.33
IGHV3-43DP0DP04 Y_RNA.242-201ENST00000364473 110 ntBASIC0.51□□□□□ -2.33
IGHV3-43DP0DP04 Y_RNA.424-201ENST00000384063 103 ntBASIC0.51□□□□□ -2.33
IGHV3-43DP0DP04 SNORA26.5-201ENST00000391215 123 ntBASIC0.51□□□□□ -2.33
IGHV3-43DP0DP04 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.51□□□□□ -2.33
IGHV3-43DP0DP04 MIR1302-11-201ENST00000408051 138 ntBASIC0.51□□□□□ -2.33
IGHV3-43DP0DP04 MIR1302-9-201ENST00000408365 138 ntBASIC0.51□□□□□ -2.33
IGHV3-43DP0DP04 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.51□□□□□ -2.33
IGHV3-43DP0DP04 MIR1302-10-201ENST00000408734 138 ntBASIC0.51□□□□□ -2.33
IGHV3-43DP0DP04 RNU6-613P-201ENST00000410412 108 ntBASIC0.51□□□□□ -2.33
IGHV3-43DP0DP04 COX6CP6-201ENST00000490840 228 ntBASIC0.51□□□□□ -2.33
IGHV3-43DP0DP04 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
IGHV3-43DP0DP04 AP003484.1-201ENST00000530974 250 ntBASIC0.51□□□□□ -2.33
IGHV3-43DP0DP04 CYP3A137P-201ENST00000562436 69 ntBASIC0.51□□□□□ -2.33
IGHV3-43DP0DP04 MIR1302-2-201ENST00000607096 138 ntBASIC0.51□□□□□ -2.33
IGHV3-43DP0DP04 Y_RNA.804-201ENST00000615262 101 ntBASIC0.51□□□□□ -2.33
IGHV3-43DP0DP04 MIR8070-201ENST00000616510 88 ntBASIC0.51□□□□□ -2.33
IGHV3-43DP0DP04 Y_RNA.4-201ENST00000362333 112 ntBASIC0.5□□□□□ -2.33
IGHV3-43DP0DP04 Y_RNA.112-201ENST00000363250 102 ntBASIC0.5□□□□□ -2.33
IGHV3-43DP0DP04 SNORA1.2-201ENST00000365189 134 ntBASIC0.5□□□□□ -2.33
IGHV3-43DP0DP04 RNU6-396P-201ENST00000365369 105 ntBASIC0.5□□□□□ -2.33
IGHV3-43DP0DP04 Y_RNA.537-201ENST00000384626 109 ntBASIC0.5□□□□□ -2.33
IGHV3-43DP0DP04 AL603910.2-201ENST00000407268 136 ntBASIC0.5□□□□□ -2.33
IGHV3-43DP0DP04 SNORD11-201ENST00000459124 84 ntBASIC0.5□□□□□ -2.33
IGHV3-43DP0DP04 RNU6-191P-201ENST00000516295 94 ntBASIC0.5□□□□□ -2.33
IGHV3-43DP0DP04 RNU6-1046P-201ENST00000516538 107 ntBASIC0.5□□□□□ -2.33
IGHV3-43DP0DP04 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.5□□□□□ -2.33
IGHV3-43DP0DP04 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.5□□□□□ -2.33
IGHV3-43DP0DP04 MIR4300-201ENST00000581016 96 ntBASIC0.5□□□□□ -2.33
IGHV3-43DP0DP04 AC006441.5-201ENST00000612680 209 ntBASIC0.5□□□□□ -2.33
IGHV3-43DP0DP04 MIR376A1-201ENST00000616574 68 ntBASIC0.5□□□□□ -2.33
IGHV3-43DP0DP04 HSBP1P2-201ENST00000299671 229 ntBASIC0.49□□□□□ -2.33
IGHV3-43DP0DP04 SNORD113-8-201ENST00000363497 74 ntBASIC0.49□□□□□ -2.33
IGHV3-43DP0DP04 RNU6-899P-201ENST00000363947 107 ntBASIC0.49□□□□□ -2.33
IGHV3-43DP0DP04 Y_RNA.418-201ENST00000384029 102 ntBASIC0.49□□□□□ -2.33
IGHV3-43DP0DP04 MIR92A1-201ENST00000385233 78 ntBASIC0.49□□□□□ -2.33
IGHV3-43DP0DP04 MT-TD-201ENST00000387419 68 ntBASIC0.49□□□□□ -2.33
IGHV3-43DP0DP04 Y_RNA.602-201ENST00000410535 92 ntBASIC0.49□□□□□ -2.33
IGHV3-43DP0DP04 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.49□□□□□ -2.33
IGHV3-43DP0DP04 SCARNA8-201ENST00000515924 131 ntBASIC0.49□□□□□ -2.33
IGHV3-43DP0DP04 RNU6-1170P-201ENST00000515974 106 ntBASIC0.49□□□□□ -2.33
IGHV3-43DP0DP04 RNU6-397P-201ENST00000516226 104 ntBASIC0.49□□□□□ -2.33
IGHV3-43DP0DP04 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.49□□□□□ -2.33
IGHV3-43DP0DP04 MIR548AO-201ENST00000579992 96 ntBASIC0.49□□□□□ -2.33
IGHV3-43DP0DP04 MIR4714-201ENST00000580728 77 ntBASIC0.49□□□□□ -2.33
IGHV3-43DP0DP04 AL133255.1-201ENST00000606374 441 ntBASIC0.49□□□□□ -2.33
IGHV3-43DP0DP04 MIR4791-201ENST00000607666 84 ntBASIC0.49□□□□□ -2.33
IGHV3-43DP0DP04 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.49□□□□□ -2.33
IGHV3-43DP0DP04 Y_RNA.168-201ENST00000363740 102 ntBASIC0.48□□□□□ -2.33
IGHV3-43DP0DP04 Y_RNA.191-201ENST00000363972 113 ntBASIC0.48□□□□□ -2.33
IGHV3-43DP0DP04 Y_RNA.222-201ENST00000364264 102 ntBASIC0.48□□□□□ -2.33
IGHV3-43DP0DP04 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
IGHV3-43DP0DP04 RNY3P14-201ENST00000384309 102 ntBASIC0.48□□□□□ -2.33
IGHV3-43DP0DP04 RNU6-308P-201ENST00000390957 107 ntBASIC0.48□□□□□ -2.33
IGHV3-43DP0DP04 MIR1827-201ENST00000408549 66 ntBASIC0.48□□□□□ -2.33
IGHV3-43DP0DP04 AC023449.1-201ENST00000454464 154 ntBASIC0.48□□□□□ -2.33
IGHV3-43DP0DP04 RNU4-57P-201ENST00000515980 135 ntBASIC0.48□□□□□ -2.33
IGHV3-43DP0DP04 AC124312.5-201ENST00000604451 268 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms