Protein–RNA interactions for Protein: P09619

PDGFRB, Platelet-derived growth factor receptor beta, humanhuman

Predictions only

Length 1,106 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRBP09619 7SK.13-201ENST00000622040 250 ntBASIC1.85□□□□□ -2.11
PDGFRBP09619 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.85□□□□□ -2.11
PDGFRBP09619 RNU1-17P-201ENST00000363022 152 ntBASIC1.84□□□□□ -2.11
PDGFRBP09619 Y_RNA.350-201ENST00000365409 98 ntBASIC1.84□□□□□ -2.11
PDGFRBP09619 Y_RNA.416-201ENST00000384014 113 ntBASIC1.84□□□□□ -2.11
PDGFRBP09619 Y_RNA.452-201ENST00000384202 108 ntBASIC1.84□□□□□ -2.11
PDGFRBP09619 RNU6-463P-201ENST00000384340 107 ntBASIC1.84□□□□□ -2.11
PDGFRBP09619 Y_RNA.478-201ENST00000384358 107 ntBASIC1.84□□□□□ -2.11
PDGFRBP09619 Y_RNA.562-201ENST00000384695 113 ntBASIC1.84□□□□□ -2.11
PDGFRBP09619 MIR526A1-201ENST00000384897 85 ntBASIC1.84□□□□□ -2.11
PDGFRBP09619 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.84□□□□□ -2.11
PDGFRBP09619 RNU6-126P-201ENST00000516685 103 ntBASIC1.84□□□□□ -2.11
PDGFRBP09619 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.84□□□□□ -2.11
PDGFRBP09619 MIR4282-201ENST00000583613 67 ntBASIC1.84□□□□□ -2.11
PDGFRBP09619 uc_338.4-201ENST00000616635 176 ntBASIC1.84□□□□□ -2.11
PDGFRBP09619 Y_RNA.122-201ENST00000363331 96 ntBASIC1.83□□□□□ -2.12
PDGFRBP09619 Y_RNA.144-201ENST00000363521 113 ntBASIC1.83□□□□□ -2.12
PDGFRBP09619 Y_RNA.277-201ENST00000364754 102 ntBASIC1.83□□□□□ -2.12
PDGFRBP09619 MIR4662B-201ENST00000579498 81 ntBASIC1.83□□□□□ -2.12
PDGFRBP09619 MIR3149-201ENST00000584629 83 ntBASIC1.83□□□□□ -2.12
PDGFRBP09619 MIR8065-201ENST00000620577 100 ntBASIC1.83□□□□□ -2.12
PDGFRBP09619 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
PDGFRBP09619 RNA5SP190-201ENST00000365222 118 ntBASIC1.82□□□□□ -2.12
PDGFRBP09619 MIR516B2-201ENST00000385190 85 ntBASIC1.82□□□□□ -2.12
PDGFRBP09619 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.82□□□□□ -2.12
PDGFRBP09619 AC090142.3-201ENST00000519012 385 ntBASIC1.82□□□□□ -2.12
PDGFRBP09619 AC100767.1-201ENST00000528178 123 ntBASIC1.82□□□□□ -2.12
PDGFRBP09619 MIR4503-201ENST00000582187 83 ntBASIC1.82□□□□□ -2.12
PDGFRBP09619 AL049861.1-201ENST00000603130 150 ntBASIC1.82□□□□□ -2.12
PDGFRBP09619 AL021707.8-201ENST00000609428 183 ntBASIC1.82□□□□□ -2.12
PDGFRBP09619 Y_RNA.24-201ENST00000362508 103 ntBASIC1.81□□□□□ -2.12
PDGFRBP09619 MIR626-201ENST00000385032 94 ntBASIC1.81□□□□□ -2.12
PDGFRBP09619 RNA5SP458-201ENST00000516188 119 ntBASIC1.81□□□□□ -2.12
PDGFRBP09619 AC004817.2-201ENST00000561794 651 ntBASIC1.81□□□□□ -2.12
PDGFRBP09619 MIR3618-201ENST00000580330 88 ntBASIC1.81□□□□□ -2.12
PDGFRBP09619 AL442067.1-201ENST00000613261 223 ntBASIC1.81□□□□□ -2.12
PDGFRBP09619 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.81□□□□□ -2.12
PDGFRBP09619 Y_RNA.262-201ENST00000364641 102 ntBASIC1.8□□□□□ -2.12
PDGFRBP09619 Y_RNA.304-201ENST00000365011 112 ntBASIC1.8□□□□□ -2.12
PDGFRBP09619 SNORD13-201ENST00000459299 104 ntBASIC1.8□□□□□ -2.12
PDGFRBP09619 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.8□□□□□ -2.12
PDGFRBP09619 MIR502-201ENST00000606349 86 ntBASIC1.8□□□□□ -2.12
PDGFRBP09619 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
PDGFRBP09619 SNORD27-201ENST00000363981 72 ntBASIC1.79□□□□□ -2.12
PDGFRBP09619 RNU4-10P-201ENST00000364383 140 ntBASIC1.79□□□□□ -2.12
PDGFRBP09619 SNORD41-201ENST00000386967 70 ntBASIC1.79□□□□□ -2.12
PDGFRBP09619 RNU6-651P-201ENST00000411040 105 ntBASIC1.79□□□□□ -2.12
PDGFRBP09619 COX6CP14-201ENST00000469580 174 ntBASIC1.79□□□□□ -2.12
PDGFRBP09619 RNU7-149P-201ENST00000516739 59 ntBASIC1.79□□□□□ -2.12
PDGFRBP09619 CYP3A52P-201ENST00000563326 91 ntBASIC1.79□□□□□ -2.12
PDGFRBP09619 MIR3683-201ENST00000580847 82 ntBASIC1.79□□□□□ -2.12
PDGFRBP09619 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
PDGFRBP09619 SNORD48-201ENST00000364953 64 ntBASIC1.78□□□□□ -2.12
PDGFRBP09619 RNU6-1138P-201ENST00000365359 106 ntBASIC1.78□□□□□ -2.12
PDGFRBP09619 SNORD72-201ENST00000390994 80 ntBASIC1.78□□□□□ -2.12
PDGFRBP09619 Y_RNA.587-201ENST00000391210 103 ntBASIC1.78□□□□□ -2.12
PDGFRBP09619 RNU6-947P-201ENST00000516264 106 ntBASIC1.78□□□□□ -2.12
PDGFRBP09619 AC006441.5-201ENST00000612680 209 ntBASIC1.78□□□□□ -2.12
PDGFRBP09619 AL365265.1-201ENST00000621045 234 ntBASIC1.78□□□□□ -2.12
PDGFRBP09619 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
PDGFRBP09619 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
PDGFRBP09619 Y_RNA.20-201ENST00000362479 113 ntBASIC1.77□□□□□ -2.13
PDGFRBP09619 RNU6-268P-201ENST00000364174 107 ntBASIC1.77□□□□□ -2.13
PDGFRBP09619 Y_RNA.229-201ENST00000364347 113 ntBASIC1.77□□□□□ -2.13
PDGFRBP09619 Y_RNA.292-201ENST00000364904 97 ntBASIC1.77□□□□□ -2.13
PDGFRBP09619 RNY3P5-201ENST00000384127 102 ntBASIC1.77□□□□□ -2.13
PDGFRBP09619 snosnR66.1-201ENST00000391095 99 ntBASIC1.77□□□□□ -2.13
PDGFRBP09619 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.77□□□□□ -2.13
PDGFRBP09619 SNORD77.4-201ENST00000516158 81 ntBASIC1.77□□□□□ -2.13
PDGFRBP09619 SNORD111.1-201ENST00000516421 86 ntBASIC1.77□□□□□ -2.13
PDGFRBP09619 SNORA74.3-201ENST00000517108 154 ntBASIC1.77□□□□□ -2.13
PDGFRBP09619 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.77□□□□□ -2.13
PDGFRBP09619 Pinc.1-201ENST00000616452 154 ntBASIC1.77□□□□□ -2.13
PDGFRBP09619 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
PDGFRBP09619 Y_RNA.140-201ENST00000363474 103 ntBASIC1.76□□□□□ -2.13
PDGFRBP09619 SNORA18.7-201ENST00000516910 131 ntBASIC1.76□□□□□ -2.13
PDGFRBP09619 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.76□□□□□ -2.13
PDGFRBP09619 AC068700.1-201ENST00000565862 3754 ntBASIC1.76□□□□□ -2.13
PDGFRBP09619 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.75□□□□□ -2.13
PDGFRBP09619 SNORA20.1-201ENST00000364790 130 ntBASIC1.75□□□□□ -2.13
PDGFRBP09619 RNA5SP363-201ENST00000365072 115 ntBASIC1.75□□□□□ -2.13
PDGFRBP09619 RNU4-17P-201ENST00000365598 141 ntBASIC1.75□□□□□ -2.13
PDGFRBP09619 Y_RNA.477-201ENST00000384352 108 ntBASIC1.75□□□□□ -2.13
PDGFRBP09619 SNORA26-201ENST00000391286 122 ntBASIC1.75□□□□□ -2.13
PDGFRBP09619 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.75□□□□□ -2.13
PDGFRBP09619 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.75□□□□□ -2.13
PDGFRBP09619 RNU6-830P-201ENST00000516353 107 ntBASIC1.75□□□□□ -2.13
PDGFRBP09619 RNU7-43P-201ENST00000516554 64 ntBASIC1.75□□□□□ -2.13
PDGFRBP09619 AL161722.3-201ENST00000605789 2983 ntBASIC1.75□□□□□ -2.13
PDGFRBP09619 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
PDGFRBP09619 Y_RNA.65-201ENST00000362846 100 ntBASIC1.74□□□□□ -2.13
PDGFRBP09619 RNU6-997P-201ENST00000384725 107 ntBASIC1.74□□□□□ -2.13
PDGFRBP09619 RNU6-1067P-201ENST00000384752 107 ntBASIC1.74□□□□□ -2.13
PDGFRBP09619 SNORA17.3-201ENST00000391159 129 ntBASIC1.74□□□□□ -2.13
PDGFRBP09619 SNRPGP14-201ENST00000435400 219 ntBASIC1.74□□□□□ -2.13
PDGFRBP09619 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.74□□□□□ -2.13
PDGFRBP09619 RPS29P23-201ENST00000458635 123 ntBASIC1.74□□□□□ -2.13
PDGFRBP09619 RNU1-98P-201ENST00000458992 160 ntBASIC1.74□□□□□ -2.13
PDGFRBP09619 RNU6-1023P-201ENST00000516137 106 ntBASIC1.74□□□□□ -2.13
PDGFRBP09619 RN7SKP164-201ENST00000516138 266 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 192.4 ms