Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 SNORA51.10-201ENST00000384418 136 ntBASIC1.22□□□□□ -2.21
HMGB1P09429 RNU6-102P-201ENST00000384485 104 ntBASIC1.22□□□□□ -2.21
HMGB1P09429 AC023449.1-201ENST00000454464 154 ntBASIC1.22□□□□□ -2.21
HMGB1P09429 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.22□□□□□ -2.21
HMGB1P09429 RNU6-830P-201ENST00000516353 107 ntBASIC1.22□□□□□ -2.21
HMGB1P09429 Y_RNA.715-201ENST00000517082 110 ntBASIC1.22□□□□□ -2.21
HMGB1P09429 AC036111.3-201ENST00000526389 112 ntBASIC1.22□□□□□ -2.21
HMGB1P09429 RNU6-1205P-201ENST00000363625 106 ntBASIC1.21□□□□□ -2.22
HMGB1P09429 Y_RNA.242-201ENST00000364473 110 ntBASIC1.21□□□□□ -2.22
HMGB1P09429 Y_RNA.569-201ENST00000384749 103 ntBASIC1.21□□□□□ -2.22
HMGB1P09429 SNORD111-201ENST00000408139 94 ntBASIC1.21□□□□□ -2.22
HMGB1P09429 RNA5SP95-201ENST00000410319 137 ntBASIC1.21□□□□□ -2.22
HMGB1P09429 RNU6-101P-201ENST00000410323 104 ntBASIC1.21□□□□□ -2.22
HMGB1P09429 U7.7-201ENST00000459276 60 ntBASIC1.21□□□□□ -2.22
HMGB1P09429 MRPS35P2-201ENST00000508242 191 ntBASIC1.21□□□□□ -2.22
HMGB1P09429 AL117351.2-201ENST00000513571 157 ntBASIC1.21□□□□□ -2.22
HMGB1P09429 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.21□□□□□ -2.22
HMGB1P09429 AL353765.1-201ENST00000605514 183 ntBASIC1.21□□□□□ -2.22
HMGB1P09429 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.21□□□□□ -2.22
HMGB1P09429 RNU4-90P-201ENST00000362773 141 ntBASIC1.2□□□□□ -2.22
HMGB1P09429 Y_RNA.183-201ENST00000363882 113 ntBASIC1.2□□□□□ -2.22
HMGB1P09429 SNORD113.3-201ENST00000364630 78 ntBASIC1.2□□□□□ -2.22
HMGB1P09429 RNU6-392P-201ENST00000364926 101 ntBASIC1.2□□□□□ -2.22
HMGB1P09429 Y_RNA.389-201ENST00000383924 113 ntBASIC1.2□□□□□ -2.22
HMGB1P09429 RPS26P5-201ENST00000418544 335 ntBASIC1.2□□□□□ -2.22
HMGB1P09429 AL392103.1-201ENST00000447000 198 ntBASIC1.2□□□□□ -2.22
HMGB1P09429 SNORD11-201ENST00000459124 84 ntBASIC1.2□□□□□ -2.22
HMGB1P09429 RNU6-764P-201ENST00000516396 105 ntBASIC1.2□□□□□ -2.22
HMGB1P09429 RNU6-897P-201ENST00000517135 105 ntBASIC1.2□□□□□ -2.22
HMGB1P09429 LARP7P1-201ENST00000605576 316 ntBASIC1.2□□□□□ -2.22
HMGB1P09429 AC104465.1-201ENST00000611365 139 ntBASIC1.2□□□□□ -2.22
HMGB1P09429 Y_RNA.222-201ENST00000364264 102 ntBASIC1.19□□□□□ -2.22
HMGB1P09429 Y_RNA.370-201ENST00000365589 108 ntBASIC1.19□□□□□ -2.22
HMGB1P09429 RNU6-763P-201ENST00000390865 106 ntBASIC1.19□□□□□ -2.22
HMGB1P09429 AL603910.2-201ENST00000407268 136 ntBASIC1.19□□□□□ -2.22
HMGB1P09429 MIR1302-7-201ENST00000408841 72 ntBASIC1.19□□□□□ -2.22
HMGB1P09429 AC025627.3-201ENST00000582078 182 ntBASIC1.19□□□□□ -2.22
HMGB1P09429 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.19□□□□□ -2.22
HMGB1P09429 RAC1P9-201ENST00000604990 392 ntBASIC1.19□□□□□ -2.22
HMGB1P09429 AL359821.1-201ENST00000605519 182 ntBASIC1.19□□□□□ -2.22
HMGB1P09429 AC103810.9-201ENST00000606688 112 ntBASIC1.19□□□□□ -2.22
HMGB1P09429 RNU4-38P-201ENST00000364472 129 ntBASIC1.18□□□□□ -2.22
HMGB1P09429 SNORA1.2-201ENST00000365189 134 ntBASIC1.18□□□□□ -2.22
HMGB1P09429 RNU6-53P-201ENST00000365367 106 ntBASIC1.18□□□□□ -2.22
HMGB1P09429 SNORD42.2-201ENST00000365570 69 ntBASIC1.18□□□□□ -2.22
HMGB1P09429 RNU6-823P-201ENST00000391042 103 ntBASIC1.18□□□□□ -2.22
HMGB1P09429 Y_RNA.645-201ENST00000391229 102 ntBASIC1.18□□□□□ -2.22
HMGB1P09429 SNORD99-201ENST00000408612 74 ntBASIC1.18□□□□□ -2.22
HMGB1P09429 AC006461.1-201ENST00000412637 326 ntBASIC1.18□□□□□ -2.22
HMGB1P09429 AL606490.4-201ENST00000423117 127 ntBASIC1.18□□□□□ -2.22
HMGB1P09429 HSPE1P25-201ENST00000455484 251 ntBASIC1.18□□□□□ -2.22
HMGB1P09429 MIR2115-201ENST00000516657 100 ntBASIC1.18□□□□□ -2.22
HMGB1P09429 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.18□□□□□ -2.22
HMGB1P09429 MIR4498-201ENST00000577599 66 ntBASIC1.18□□□□□ -2.22
HMGB1P09429 AL512605.2-201ENST00000592972 256 ntBASIC1.18□□□□□ -2.22
HMGB1P09429 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HMGB1P09429 AL442644.1-201ENST00000454390 3105 ntBASIC1.17□□□□□ -2.22
HMGB1P09429 MIR100-201ENST00000385259 80 ntBASIC1.17□□□□□ -2.22
HMGB1P09429 MTATP6P23-201ENST00000440153 476 ntBASIC1.17□□□□□ -2.22
HMGB1P09429 SCARNA8-201ENST00000515924 131 ntBASIC1.17□□□□□ -2.22
HMGB1P09429 RNU6-496P-201ENST00000516145 99 ntBASIC1.17□□□□□ -2.22
HMGB1P09429 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.17□□□□□ -2.22
HMGB1P09429 AL136317.1-201ENST00000612653 226 ntBASIC1.17□□□□□ -2.22
HMGB1P09429 AC006441.5-201ENST00000612680 209 ntBASIC1.17□□□□□ -2.22
HMGB1P09429 RNU6-396P-201ENST00000365369 105 ntBASIC1.16□□□□□ -2.22
HMGB1P09429 SNORD115-46-201ENST00000390982 71 ntBASIC1.16□□□□□ -2.22
HMGB1P09429 MTND4LP11-201ENST00000422184 280 ntBASIC1.16□□□□□ -2.22
HMGB1P09429 AL603825.1-201ENST00000438481 80 ntBASIC1.16□□□□□ -2.22
HMGB1P09429 Y_RNA.639-201ENST00000458981 102 ntBASIC1.16□□□□□ -2.22
HMGB1P09429 AC091895.1-201ENST00000624494 256 ntBASIC1.16□□□□□ -2.22
HMGB1P09429 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.15□□□□□ -2.23
HMGB1P09429 RNU6-383P-201ENST00000410864 94 ntBASIC1.15□□□□□ -2.23
HMGB1P09429 PMCHL1-202ENST00000423102 261 ntBASIC1.15□□□□□ -2.23
HMGB1P09429 MTCO1P5-201ENST00000433573 344 ntBASIC1.15□□□□□ -2.23
HMGB1P09429 AC113410.1-201ENST00000505029 247 ntBASIC1.15□□□□□ -2.23
HMGB1P09429 SNORA40.15-201ENST00000516884 107 ntBASIC1.15□□□□□ -2.23
HMGB1P09429 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.15□□□□□ -2.23
HMGB1P09429 MIR4791-201ENST00000607666 84 ntBASIC1.15□□□□□ -2.23
HMGB1P09429 Y_RNA.136-201ENST00000363444 102 ntBASIC1.14□□□□□ -2.23
HMGB1P09429 RNU6-144P-201ENST00000383951 107 ntBASIC1.14□□□□□ -2.23
HMGB1P09429 Y_RNA.537-201ENST00000384626 109 ntBASIC1.14□□□□□ -2.23
HMGB1P09429 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.14□□□□□ -2.23
HMGB1P09429 RNU6-1110P-201ENST00000516462 101 ntBASIC1.14□□□□□ -2.23
HMGB1P09429 Y_RNA.721-201ENST00000517207 102 ntBASIC1.14□□□□□ -2.23
HMGB1P09429 MIR548AO-201ENST00000579992 96 ntBASIC1.14□□□□□ -2.23
HMGB1P09429 MIR4653-201ENST00000585107 83 ntBASIC1.14□□□□□ -2.23
HMGB1P09429 C8orf59P2-201ENST00000603441 271 ntBASIC1.14□□□□□ -2.23
HMGB1P09429 MTND1P7-201ENST00000632801 297 ntBASIC1.14□□□□□ -2.23
HMGB1P09429 Y_RNA.14-201ENST00000362415 103 ntBASIC1.13□□□□□ -2.23
HMGB1P09429 MIR1252-201ENST00000408861 65 ntBASIC1.13□□□□□ -2.23
HMGB1P09429 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.13□□□□□ -2.23
HMGB1P09429 COX6CP14-201ENST00000469580 174 ntBASIC1.13□□□□□ -2.23
HMGB1P09429 RNU6-988P-201ENST00000519081 107 ntBASIC1.13□□□□□ -2.23
HMGB1P09429 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
HMGB1P09429 Y_RNA.28-201ENST00000362554 111 ntBASIC1.12□□□□□ -2.23
HMGB1P09429 RNU6-847P-201ENST00000411115 108 ntBASIC1.12□□□□□ -2.23
HMGB1P09429 RNU6-514P-201ENST00000384208 107 ntBASIC1.11□□□□□ -2.23
HMGB1P09429 RNU6-613P-201ENST00000410412 108 ntBASIC1.11□□□□□ -2.23
HMGB1P09429 TRMT112P2-201ENST00000512910 132 ntBASIC1.11□□□□□ -2.23
HMGB1P09429 AC108729.3-201ENST00000513484 108 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 196.2 ms