Protein–RNA interactions for Protein: P05556

ITGB1, Integrin beta-1, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1P05556 OR9P1P-201ENST00000496431 281 ntBASIC2.34□□□□□ -2.03
ITGB1P05556 RNU6-772P-201ENST00000516042 105 ntBASIC2.34□□□□□ -2.03
ITGB1P05556 RNU2-60P-201ENST00000517290 128 ntBASIC2.34□□□□□ -2.03
ITGB1P05556 Y_RNA.757-201ENST00000578934 114 ntBASIC2.34□□□□□ -2.03
ITGB1P05556 AC091178.2-201ENST00000584401 117 ntBASIC2.34□□□□□ -2.03
ITGB1P05556 AC131055.1-201ENST00000584626 316 ntBASIC2.34□□□□□ -2.03
ITGB1P05556 AC242852.1-201ENST00000612151 96 ntBASIC2.34□□□□□ -2.03
ITGB1P05556 AL359075.3-201ENST00000613288 217 ntBASIC2.34□□□□□ -2.03
ITGB1P05556 JPX_2.1-201ENST00000614161 69 ntBASIC2.34□□□□□ -2.03
ITGB1P05556 AC244015.1-201ENST00000622301 99 ntBASIC2.34□□□□□ -2.03
ITGB1P05556 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
ITGB1P05556 RNU6-476P-201ENST00000384726 107 ntBASIC2.33□□□□□ -2.04
ITGB1P05556 MIR515-2-201ENST00000384883 83 ntBASIC2.33□□□□□ -2.04
ITGB1P05556 MIR515-1-201ENST00000384884 83 ntBASIC2.33□□□□□ -2.04
ITGB1P05556 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.33□□□□□ -2.04
ITGB1P05556 RPS26P45-201ENST00000471748 340 ntBASIC2.33□□□□□ -2.04
ITGB1P05556 RNU5E-3P-201ENST00000515913 68 ntBASIC2.33□□□□□ -2.04
ITGB1P05556 RNA5SP200-201ENST00000516360 103 ntBASIC2.33□□□□□ -2.04
ITGB1P05556 RNU6-1291P-201ENST00000516591 104 ntBASIC2.33□□□□□ -2.04
ITGB1P05556 SCARNA16.3-201ENST00000516595 184 ntBASIC2.33□□□□□ -2.04
ITGB1P05556 Y_RNA.692-201ENST00000516627 105 ntBASIC2.33□□□□□ -2.04
ITGB1P05556 RNU6-295P-201ENST00000516901 104 ntBASIC2.33□□□□□ -2.04
ITGB1P05556 Y_RNA.712-201ENST00000517011 92 ntBASIC2.33□□□□□ -2.04
ITGB1P05556 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.33□□□□□ -2.04
ITGB1P05556 AC022202.1-201ENST00000613515 211 ntBASIC2.33□□□□□ -2.04
ITGB1P05556 AC009831.4-201ENST00000620744 325 ntBASIC2.33□□□□□ -2.04
ITGB1P05556 AC022513.1-201ENST00000624512 117 ntBASIC2.33□□□□□ -2.04
ITGB1P05556 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
ITGB1P05556 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.33□□□□□ -2.04
ITGB1P05556 Y_RNA.114-201ENST00000363265 113 ntBASIC2.32□□□□□ -2.04
ITGB1P05556 Y_RNA.120-201ENST00000363304 110 ntBASIC2.32□□□□□ -2.04
ITGB1P05556 RNU6-309P-201ENST00000364573 106 ntBASIC2.32□□□□□ -2.04
ITGB1P05556 Y_RNA.280-201ENST00000364765 112 ntBASIC2.32□□□□□ -2.04
ITGB1P05556 RNU6-1138P-201ENST00000365359 106 ntBASIC2.32□□□□□ -2.04
ITGB1P05556 MIR29C-201ENST00000385231 88 ntBASIC2.32□□□□□ -2.04
ITGB1P05556 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.32□□□□□ -2.04
ITGB1P05556 SNORA12.1-201ENST00000390873 148 ntBASIC2.32□□□□□ -2.04
ITGB1P05556 SNORA40.5-201ENST00000391061 128 ntBASIC2.32□□□□□ -2.04
ITGB1P05556 Y_RNA.630-201ENST00000411370 108 ntBASIC2.32□□□□□ -2.04
ITGB1P05556 CST2P1-201ENST00000425770 87 ntBASIC2.32□□□□□ -2.04
ITGB1P05556 AL158147.1-201ENST00000443970 75 ntBASIC2.32□□□□□ -2.04
ITGB1P05556 RPS27P21-201ENST00000486977 252 ntBASIC2.32□□□□□ -2.04
ITGB1P05556 AC007751.1-201ENST00000529260 376 ntBASIC2.32□□□□□ -2.04
ITGB1P05556 MTND5P34-201ENST00000568888 325 ntBASIC2.32□□□□□ -2.04
ITGB1P05556 MIR3121-201ENST00000579680 77 ntBASIC2.32□□□□□ -2.04
ITGB1P05556 MIR3914-2-201ENST00000637339 95 ntBASIC2.32□□□□□ -2.04
ITGB1P05556 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
ITGB1P05556 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.31□□□□□ -2.04
ITGB1P05556 Y_RNA.66-201ENST00000362862 102 ntBASIC2.31□□□□□ -2.04
ITGB1P05556 RNU6-23P-201ENST00000363283 107 ntBASIC2.31□□□□□ -2.04
ITGB1P05556 RNU6-1144P-201ENST00000384247 104 ntBASIC2.31□□□□□ -2.04
ITGB1P05556 RNY4P18-201ENST00000391107 89 ntBASIC2.31□□□□□ -2.04
ITGB1P05556 RNU11-5P-201ENST00000391216 129 ntBASIC2.31□□□□□ -2.04
ITGB1P05556 SNORA26.9-201ENST00000391322 122 ntBASIC2.31□□□□□ -2.04
ITGB1P05556 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.31□□□□□ -2.04
ITGB1P05556 MRPS17P9-201ENST00000511924 393 ntBASIC2.31□□□□□ -2.04
ITGB1P05556 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.31□□□□□ -2.04
ITGB1P05556 RNU6-1061P-201ENST00000516530 99 ntBASIC2.31□□□□□ -2.04
ITGB1P05556 Y_RNA.690-201ENST00000516603 95 ntBASIC2.31□□□□□ -2.04
ITGB1P05556 RNA5SP137-201ENST00000516833 135 ntBASIC2.31□□□□□ -2.04
ITGB1P05556 AC024995.1-201ENST00000523014 93 ntBASIC2.31□□□□□ -2.04
ITGB1P05556 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.31□□□□□ -2.04
ITGB1P05556 MIR6132-201ENST00000622083 109 ntBASIC2.31□□□□□ -2.04
ITGB1P05556 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
ITGB1P05556 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
ITGB1P05556 AC018630.2-201ENST00000534866 2403 ntBASIC2.3□□□□□ -2.04
ITGB1P05556 RNU1-58P-201ENST00000362413 163 ntBASIC2.3□□□□□ -2.04
ITGB1P05556 Y_RNA.253-201ENST00000364562 112 ntBASIC2.3□□□□□ -2.04
ITGB1P05556 Y_RNA.267-201ENST00000364679 109 ntBASIC2.3□□□□□ -2.04
ITGB1P05556 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
ITGB1P05556 SNORD72-201ENST00000390994 80 ntBASIC2.3□□□□□ -2.04
ITGB1P05556 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.3□□□□□ -2.04
ITGB1P05556 AL445646.1-201ENST00000431784 216 ntBASIC2.3□□□□□ -2.04
ITGB1P05556 AC099677.2-201ENST00000436385 175 ntBASIC2.3□□□□□ -2.04
ITGB1P05556 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.3□□□□□ -2.04
ITGB1P05556 RNU1-142P-201ENST00000516682 145 ntBASIC2.3□□□□□ -2.04
ITGB1P05556 RNU7-193P-201ENST00000516723 65 ntBASIC2.3□□□□□ -2.04
ITGB1P05556 AC133485.4-201ENST00000561835 220 ntBASIC2.3□□□□□ -2.04
ITGB1P05556 AC138907.4-201ENST00000570107 226 ntBASIC2.3□□□□□ -2.04
ITGB1P05556 AC108081.1-201ENST00000604358 221 ntBASIC2.3□□□□□ -2.04
ITGB1P05556 Y_RNA.52-201ENST00000362760 96 ntBASIC2.29□□□□□ -2.04
ITGB1P05556 RNU6-862P-201ENST00000362804 105 ntBASIC2.29□□□□□ -2.04
ITGB1P05556 SNORD18B-201ENST00000365659 72 ntBASIC2.29□□□□□ -2.04
ITGB1P05556 SNORA1-201ENST00000384107 130 ntBASIC2.29□□□□□ -2.04
ITGB1P05556 SNORA26-201ENST00000391286 122 ntBASIC2.29□□□□□ -2.04
ITGB1P05556 SNRPGP10-201ENST00000432323 225 ntBASIC2.29□□□□□ -2.04
ITGB1P05556 HMGN1P7-201ENST00000491722 313 ntBASIC2.29□□□□□ -2.04
ITGB1P05556 PDCD5P2-201ENST00000507570 312 ntBASIC2.29□□□□□ -2.04
ITGB1P05556 SNORD33.1-201ENST00000516213 88 ntBASIC2.29□□□□□ -2.04
ITGB1P05556 SNORA18.4-201ENST00000516440 124 ntBASIC2.29□□□□□ -2.04
ITGB1P05556 MIR514B-201ENST00000516774 80 ntBASIC2.29□□□□□ -2.04
ITGB1P05556 RNU6-341P-201ENST00000516973 96 ntBASIC2.29□□□□□ -2.04
ITGB1P05556 RNU6-365P-201ENST00000517113 106 ntBASIC2.29□□□□□ -2.04
ITGB1P05556 MIR3126-201ENST00000577443 74 ntBASIC2.29□□□□□ -2.04
ITGB1P05556 MIR4662B-201ENST00000579498 81 ntBASIC2.29□□□□□ -2.04
ITGB1P05556 MIR3129-201ENST00000581095 76 ntBASIC2.29□□□□□ -2.04
ITGB1P05556 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.29□□□□□ -2.04
ITGB1P05556 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.29□□□□□ -2.04
ITGB1P05556 MIR6079-201ENST00000635807 62 ntBASIC2.29□□□□□ -2.04
ITGB1P05556 Y_RNA.140-201ENST00000363474 103 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 929 ms