Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AL603910.2-201ENST00000407268 136 ntBASIC1.31□□□□□ -2.2
VTNP04004 Y_RNA.590-201ENST00000410140 107 ntBASIC1.31□□□□□ -2.2
VTNP04004 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.31□□□□□ -2.2
VTNP04004 RPL30P13-201ENST00000418873 348 ntBASIC1.31□□□□□ -2.2
VTNP04004 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.31□□□□□ -2.2
VTNP04004 SNORD127-201ENST00000458892 86 ntBASIC1.31□□□□□ -2.2
VTNP04004 RNU1-98P-201ENST00000458992 160 ntBASIC1.31□□□□□ -2.2
VTNP04004 Y_RNA.641-201ENST00000459414 105 ntBASIC1.31□□□□□ -2.2
VTNP04004 Y_RNA.714-201ENST00000517065 90 ntBASIC1.31□□□□□ -2.2
VTNP04004 MIR4503-201ENST00000582187 83 ntBASIC1.31□□□□□ -2.2
VTNP04004 AC120024.3-201ENST00000603167 156 ntBASIC1.31□□□□□ -2.2
VTNP04004 AP001485.1-201ENST00000604799 199 ntBASIC1.31□□□□□ -2.2
VTNP04004 AL365434.2-201ENST00000607979 234 ntBASIC1.31□□□□□ -2.2
VTNP04004 AL008718.3-201ENST00000610217 321 ntBASIC1.31□□□□□ -2.2
VTNP04004 MIR6504-201ENST00000613520 61 ntBASIC1.31□□□□□ -2.2
VTNP04004 U4.1-201ENST00000620349 87 ntBASIC1.31□□□□□ -2.2
VTNP04004 MIRLET7C-201ENST00000362160 84 ntBASIC1.3□□□□□ -2.2
VTNP04004 MIR335-201ENST00000362173 94 ntBASIC1.3□□□□□ -2.2
VTNP04004 MIR367-201ENST00000362299 68 ntBASIC1.3□□□□□ -2.2
VTNP04004 SNORD114-27-201ENST00000363766 70 ntBASIC1.3□□□□□ -2.2
VTNP04004 Y_RNA.556-201ENST00000384677 113 ntBASIC1.3□□□□□ -2.2
VTNP04004 RNU6-1132P-201ENST00000459214 107 ntBASIC1.3□□□□□ -2.2
VTNP04004 AC090821.2-201ENST00000523552 176 ntBASIC1.3□□□□□ -2.2
VTNP04004 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.3□□□□□ -2.2
VTNP04004 MIR2681-201ENST00000581814 105 ntBASIC1.3□□□□□ -2.2
VTNP04004 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.3□□□□□ -2.2
VTNP04004 AL078604.3-201ENST00000615580 211 ntBASIC1.3□□□□□ -2.2
VTNP04004 U2.14-201ENST00000615943 113 ntBASIC1.3□□□□□ -2.2
VTNP04004 AL121890.5-201ENST00000620848 304 ntBASIC1.3□□□□□ -2.2
VTNP04004 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.3□□□□□ -2.2
VTNP04004 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.3□□□□□ -2.2
VTNP04004 UBE2WP1-201ENST00000362030 340 ntBASIC1.29□□□□□ -2.2
VTNP04004 Y_RNA.14-201ENST00000362415 103 ntBASIC1.29□□□□□ -2.2
VTNP04004 SNORD27-201ENST00000363981 72 ntBASIC1.29□□□□□ -2.2
VTNP04004 Y_RNA.224-201ENST00000364308 111 ntBASIC1.29□□□□□ -2.2
VTNP04004 RNU6-144P-201ENST00000383951 107 ntBASIC1.29□□□□□ -2.2
VTNP04004 MIR802-201ENST00000390235 94 ntBASIC1.29□□□□□ -2.2
VTNP04004 MIR891A-201ENST00000401237 79 ntBASIC1.29□□□□□ -2.2
VTNP04004 CYCTP-201ENST00000504253 315 ntBASIC1.29□□□□□ -2.2
VTNP04004 SNORD45.4-201ENST00000516629 73 ntBASIC1.29□□□□□ -2.2
VTNP04004 AC006006.1-201ENST00000603082 144 ntBASIC1.29□□□□□ -2.2
VTNP04004 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.29□□□□□ -2.2
VTNP04004 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
VTNP04004 AC068700.1-201ENST00000565862 3754 ntBASIC1.29□□□□□ -2.2
VTNP04004 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
VTNP04004 RNU6-199P-201ENST00000362954 107 ntBASIC1.28□□□□□ -2.2
VTNP04004 Y_RNA.144-201ENST00000363521 113 ntBASIC1.28□□□□□ -2.2
VTNP04004 Y_RNA.796-201ENST00000364268 102 ntBASIC1.28□□□□□ -2.2
VTNP04004 Y_RNA.799-201ENST00000364992 102 ntBASIC1.28□□□□□ -2.2
VTNP04004 SNORD50B-201ENST00000364995 70 ntBASIC1.28□□□□□ -2.2
VTNP04004 RNU6-1065P-201ENST00000384513 106 ntBASIC1.28□□□□□ -2.2
VTNP04004 SNX2P2-201ENST00000424553 323 ntBASIC1.28□□□□□ -2.2
VTNP04004 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.28□□□□□ -2.2
VTNP04004 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.28□□□□□ -2.2
VTNP04004 RPL39P38-201ENST00000467018 153 ntBASIC1.28□□□□□ -2.2
VTNP04004 MIR4724-201ENST00000579485 89 ntBASIC1.28□□□□□ -2.2
VTNP04004 MIR3149-201ENST00000584629 83 ntBASIC1.28□□□□□ -2.2
VTNP04004 7SK.10-201ENST00000621414 298 ntBASIC1.28□□□□□ -2.2
VTNP04004 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
VTNP04004 Y_RNA.24-201ENST00000362508 103 ntBASIC1.27□□□□□ -2.21
VTNP04004 Y_RNA.65-201ENST00000362846 100 ntBASIC1.27□□□□□ -2.21
VTNP04004 RNU6-674P-201ENST00000363831 107 ntBASIC1.27□□□□□ -2.21
VTNP04004 RNU6-702P-201ENST00000364982 107 ntBASIC1.27□□□□□ -2.21
VTNP04004 snoU2-30.1-201ENST00000365012 70 ntBASIC1.27□□□□□ -2.21
VTNP04004 SNORD114-22-201ENST00000365423 72 ntBASIC1.27□□□□□ -2.21
VTNP04004 Y_RNA.352-201ENST00000365439 102 ntBASIC1.27□□□□□ -2.21
VTNP04004 RNU6-955P-201ENST00000410497 104 ntBASIC1.27□□□□□ -2.21
VTNP04004 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.27□□□□□ -2.21
VTNP04004 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.27□□□□□ -2.21
VTNP04004 AC023449.1-201ENST00000454464 154 ntBASIC1.27□□□□□ -2.21
VTNP04004 RPS29P23-201ENST00000458635 123 ntBASIC1.27□□□□□ -2.21
VTNP04004 AC092991.1-201ENST00000477176 376 ntBASIC1.27□□□□□ -2.21
VTNP04004 AC062037.2-201ENST00000610137 73 ntBASIC1.27□□□□□ -2.21
VTNP04004 Y_RNA.802-201ENST00000614892 130 ntBASIC1.27□□□□□ -2.21
VTNP04004 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.27□□□□□ -2.21
VTNP04004 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
VTNP04004 Y_RNA.191-201ENST00000363972 113 ntBASIC1.26□□□□□ -2.21
VTNP04004 SNORD14E-201ENST00000364009 85 ntBASIC1.26□□□□□ -2.21
VTNP04004 RNU6-969P-201ENST00000383900 105 ntBASIC1.26□□□□□ -2.21
VTNP04004 RNU6-463P-201ENST00000384340 107 ntBASIC1.26□□□□□ -2.21
VTNP04004 MIR516B2-201ENST00000385190 85 ntBASIC1.26□□□□□ -2.21
VTNP04004 MIR548H3-201ENST00000408771 118 ntBASIC1.26□□□□□ -2.21
VTNP04004 RNU6-947P-201ENST00000516264 106 ntBASIC1.26□□□□□ -2.21
VTNP04004 RNU6-922P-201ENST00000516753 99 ntBASIC1.26□□□□□ -2.21
VTNP04004 MIR4643-201ENST00000577473 78 ntBASIC1.26□□□□□ -2.21
VTNP04004 MIR4762-201ENST00000585261 75 ntBASIC1.26□□□□□ -2.21
VTNP04004 FAM106DP-201ENST00000586416 501 ntBASIC1.26□□□□□ -2.21
VTNP04004 AL049861.1-201ENST00000603130 150 ntBASIC1.26□□□□□ -2.21
VTNP04004 Y_RNA.122-201ENST00000363331 96 ntBASIC1.25□□□□□ -2.21
VTNP04004 RNU6-833P-201ENST00000363486 107 ntBASIC1.25□□□□□ -2.21
VTNP04004 U8.5-201ENST00000364528 136 ntBASIC1.25□□□□□ -2.21
VTNP04004 Y_RNA.572-201ENST00000384757 98 ntBASIC1.25□□□□□ -2.21
VTNP04004 snosnR66.1-201ENST00000391095 99 ntBASIC1.25□□□□□ -2.21
VTNP04004 MIR1298-201ENST00000408783 112 ntBASIC1.25□□□□□ -2.21
VTNP04004 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.25□□□□□ -2.21
VTNP04004 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.25□□□□□ -2.21
VTNP04004 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.25□□□□□ -2.21
VTNP04004 MIR4452-201ENST00000583004 71 ntBASIC1.25□□□□□ -2.21
VTNP04004 AC027279.3-201ENST00000625055 122 ntBASIC1.25□□□□□ -2.21
VTNP04004 AL161722.3-201ENST00000605789 2983 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms