Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RNU7-67P-201ENST00000459003 62 ntBASIC-0.62□□□□□ -2.51
APOEP02649 AC011352.1-201ENST00000512300 793 ntBASIC-0.62□□□□□ -2.51
APOEP02649 RN7SKP298-201ENST00000515950 94 ntBASIC-0.62□□□□□ -2.51
APOEP02649 RNA5SP47-201ENST00000517230 109 ntBASIC-0.62□□□□□ -2.51
APOEP02649 AL670379.3-201ENST00000605040 251 ntBASIC-0.62□□□□□ -2.51
APOEP02649 MIR30D-201ENST00000362283 70 ntBASIC-0.63□□□□□ -2.51
APOEP02649 RNU6-740P-201ENST00000364734 105 ntBASIC-0.63□□□□□ -2.51
APOEP02649 SNORA31.14-201ENST00000516728 116 ntBASIC-0.63□□□□□ -2.51
APOEP02649 MIR4802-201ENST00000581881 80 ntBASIC-0.63□□□□□ -2.51
APOEP02649 RNU1-29P-201ENST00000606574 126 ntBASIC-0.63□□□□□ -2.51
APOEP02649 AC006441.5-201ENST00000612680 209 ntBASIC-0.63□□□□□ -2.51
APOEP02649 SNORD114-28-201ENST00000363610 72 ntBASIC-0.64□□□□□ -2.51
APOEP02649 Y_RNA.295-201ENST00000364918 102 ntBASIC-0.64□□□□□ -2.51
APOEP02649 RNU6-601P-201ENST00000384540 107 ntBASIC-0.64□□□□□ -2.51
APOEP02649 RNU6-913P-201ENST00000390913 95 ntBASIC-0.64□□□□□ -2.51
APOEP02649 AL603910.2-201ENST00000407268 136 ntBASIC-0.64□□□□□ -2.51
APOEP02649 POLR2KP2-201ENST00000438155 177 ntBASIC-0.64□□□□□ -2.51
APOEP02649 RNU6-958P-201ENST00000516995 106 ntBASIC-0.64□□□□□ -2.51
APOEP02649 AC105029.1-201ENST00000520250 669 ntBASIC-0.64□□□□□ -2.51
APOEP02649 POLR3GP1-201ENST00000594073 261 ntBASIC-0.64□□□□□ -2.51
APOEP02649 AC121247.2-201ENST00000604776 136 ntBASIC-0.64□□□□□ -2.51
APOEP02649 AC005014.2-201ENST00000607795 599 ntBASIC-0.64□□□□□ -2.51
APOEP02649 RNU6-1085P-201ENST00000363576 107 ntBASIC-0.65□□□□□ -2.51
APOEP02649 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.65□□□□□ -2.51
APOEP02649 RNU6-652P-201ENST00000365488 107 ntBASIC-0.65□□□□□ -2.51
APOEP02649 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.65□□□□□ -2.51
APOEP02649 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.65□□□□□ -2.51
APOEP02649 MIR563-201ENST00000385080 79 ntBASIC-0.65□□□□□ -2.51
APOEP02649 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.65□□□□□ -2.51
APOEP02649 RNU4-83P-201ENST00000410863 133 ntBASIC-0.65□□□□□ -2.51
APOEP02649 HMGN1P33-201ENST00000432945 451 ntBASIC-0.65□□□□□ -2.51
APOEP02649 AC107297.1-201ENST00000459991 176 ntBASIC-0.65□□□□□ -2.51
APOEP02649 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-0.65□□□□□ -2.51
APOEP02649 RNU6-436P-201ENST00000516171 114 ntBASIC-0.65□□□□□ -2.51
APOEP02649 MIR5589-201ENST00000579442 60 ntBASIC-0.65□□□□□ -2.51
APOEP02649 MIR3152-201ENST00000579801 74 ntBASIC-0.65□□□□□ -2.51
APOEP02649 MIR3942-201ENST00000585264 109 ntBASIC-0.65□□□□□ -2.51
APOEP02649 MIR8055-201ENST00000610739 97 ntBASIC-0.65□□□□□ -2.51
APOEP02649 Z97988.1-201ENST00000637697 135 ntBASIC-0.65□□□□□ -2.51
APOEP02649 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.66□□□□□ -2.52
APOEP02649 RNU6-161P-201ENST00000363051 106 ntBASIC-0.66□□□□□ -2.52
APOEP02649 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.66□□□□□ -2.52
APOEP02649 SNORD14C-201ENST00000365382 88 ntBASIC-0.66□□□□□ -2.52
APOEP02649 Y_RNA.414-201ENST00000384011 101 ntBASIC-0.66□□□□□ -2.52
APOEP02649 SNORA8.3-201ENST00000384679 139 ntBASIC-0.66□□□□□ -2.52
APOEP02649 MT-TF-201ENST00000387314 71 ntBASIC-0.66□□□□□ -2.52
APOEP02649 SNORD93-201ENST00000408813 74 ntBASIC-0.66□□□□□ -2.52
APOEP02649 RNA5SP118-201ENST00000410385 109 ntBASIC-0.66□□□□□ -2.52
APOEP02649 MIR1912-201ENST00000410389 80 ntBASIC-0.66□□□□□ -2.52
APOEP02649 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.66□□□□□ -2.52
APOEP02649 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.66□□□□□ -2.52
APOEP02649 MTND3P21-201ENST00000433774 331 ntBASIC-0.66□□□□□ -2.52
APOEP02649 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.66□□□□□ -2.52
APOEP02649 RNU6-273P-201ENST00000516937 96 ntBASIC-0.66□□□□□ -2.52
APOEP02649 AC073114.1-201ENST00000612027 490 ntBASIC-0.66□□□□□ -2.52
APOEP02649 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.67□□□□□ -2.52
APOEP02649 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.67□□□□□ -2.52
APOEP02649 SNORD28-201ENST00000384706 75 ntBASIC-0.67□□□□□ -2.52
APOEP02649 Y_RNA.582-201ENST00000391023 95 ntBASIC-0.67□□□□□ -2.52
APOEP02649 SNORA75.4-201ENST00000391278 119 ntBASIC-0.67□□□□□ -2.52
APOEP02649 RNU6-602P-201ENST00000411155 105 ntBASIC-0.67□□□□□ -2.52
APOEP02649 RNU6-966P-201ENST00000516479 104 ntBASIC-0.67□□□□□ -2.52
APOEP02649 Y_RNA.695-201ENST00000516715 107 ntBASIC-0.67□□□□□ -2.52
APOEP02649 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.67□□□□□ -2.52
APOEP02649 AP001180.6-201ENST00000584918 159 ntBASIC-0.67□□□□□ -2.52
APOEP02649 AC060780.3-201ENST00000589464 80 ntBASIC-0.67□□□□□ -2.52
APOEP02649 AC006157.1-201ENST00000611750 366 ntBASIC-0.67□□□□□ -2.52
APOEP02649 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.67□□□□□ -2.52
APOEP02649 MIR6863-201ENST00000636112 90 ntBASIC-0.67□□□□□ -2.52
APOEP02649 SNORD12C-201ENST00000386307 89 ntBASIC-0.68□□□□□ -2.52
APOEP02649 SEPT14P3-201ENST00000439401 183 ntBASIC-0.68□□□□□ -2.52
APOEP02649 AL732372.2-207ENST00000445840 183 ntBASIC-0.68□□□□□ -2.52
APOEP02649 MTND1P17-201ENST00000448961 204 ntBASIC-0.68□□□□□ -2.52
APOEP02649 SEPT14P2-201ENST00000453405 183 ntBASIC-0.68□□□□□ -2.52
APOEP02649 SNORD126-201ENST00000459475 77 ntBASIC-0.68□□□□□ -2.52
APOEP02649 SEPT14P4-201ENST00000513445 186 ntBASIC-0.68□□□□□ -2.52
APOEP02649 FO082796.1-201ENST00000523795 183 ntBASIC-0.68□□□□□ -2.52
APOEP02649 AC093424.1-201ENST00000604999 338 ntBASIC-0.68□□□□□ -2.52
APOEP02649 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.69□□□□□ -2.52
APOEP02649 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.69□□□□□ -2.52
APOEP02649 MIR501-201ENST00000390204 84 ntBASIC-0.69□□□□□ -2.52
APOEP02649 FCF1P9-201ENST00000412546 282 ntBASIC-0.69□□□□□ -2.52
APOEP02649 HMGN2P22-201ENST00000427588 175 ntBASIC-0.69□□□□□ -2.52
APOEP02649 MTCO1P5-201ENST00000433573 344 ntBASIC-0.69□□□□□ -2.52
APOEP02649 RNU6-155P-201ENST00000516347 100 ntBASIC-0.69□□□□□ -2.52
APOEP02649 RNU7-25P-201ENST00000516544 62 ntBASIC-0.69□□□□□ -2.52
APOEP02649 RNU7-116P-201ENST00000516940 62 ntBASIC-0.69□□□□□ -2.52
APOEP02649 AC024405.2-202ENST00000532731 184 ntBASIC-0.69□□□□□ -2.52
APOEP02649 DISC2.1-201ENST00000612827 205 ntBASIC-0.69□□□□□ -2.52
APOEP02649 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.7□□□□□ -2.52
APOEP02649 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.7□□□□□ -2.52
APOEP02649 RNU6-926P-201ENST00000384075 107 ntBASIC-0.7□□□□□ -2.52
APOEP02649 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.7□□□□□ -2.52
APOEP02649 MIR215-201ENST00000384858 110 ntBASIC-0.7□□□□□ -2.52
APOEP02649 MIR1278-201ENST00000408753 81 ntBASIC-0.7□□□□□ -2.52
APOEP02649 SNORD5.1-201ENST00000458800 75 ntBASIC-0.7□□□□□ -2.52
APOEP02649 RNU6-956P-201ENST00000458868 103 ntBASIC-0.7□□□□□ -2.52
APOEP02649 Y_RNA.693-201ENST00000516641 110 ntBASIC-0.7□□□□□ -2.52
APOEP02649 RNU1-54P-201ENST00000517181 120 ntBASIC-0.7□□□□□ -2.52
APOEP02649 MIR4636-201ENST00000582271 80 ntBASIC-0.7□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms