Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.54□□□□□ -2.32
MBD3O95983 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.54□□□□□ -2.32
MBD3O95983 AC011373.1-201ENST00000607270 237 ntBASIC0.54□□□□□ -2.32
MBD3O95983 AC006441.5-201ENST00000612680 209 ntBASIC0.54□□□□□ -2.32
MBD3O95983 MIR377-201ENST00000362145 69 ntBASIC0.53□□□□□ -2.32
MBD3O95983 Y_RNA.112-201ENST00000363250 102 ntBASIC0.53□□□□□ -2.32
MBD3O95983 SNORD105-201ENST00000386910 85 ntBASIC0.53□□□□□ -2.32
MBD3O95983 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
MBD3O95983 U8.17-201ENST00000391292 132 ntBASIC0.53□□□□□ -2.32
MBD3O95983 MTCO2P27-201ENST00000420740 428 ntBASIC0.53□□□□□ -2.32
MBD3O95983 AC244098.3-201ENST00000424803 96 ntBASIC0.53□□□□□ -2.32
MBD3O95983 AC096644.2-201ENST00000429278 159 ntBASIC0.53□□□□□ -2.32
MBD3O95983 AC005534.2-201ENST00000431047 433 ntBASIC0.53□□□□□ -2.32
MBD3O95983 NDUFA4P2-201ENST00000489989 244 ntBASIC0.53□□□□□ -2.32
MBD3O95983 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.53□□□□□ -2.32
MBD3O95983 AL080274.1-201ENST00000605565 220 ntBASIC0.53□□□□□ -2.32
MBD3O95983 RNU6-94P-201ENST00000607728 107 ntBASIC0.53□□□□□ -2.32
MBD3O95983 MIR1-1-201ENST00000362147 71 ntBASIC0.52□□□□□ -2.33
MBD3O95983 Y_RNA.70-201ENST00000362886 110 ntBASIC0.52□□□□□ -2.33
MBD3O95983 RNU1-133P-201ENST00000364867 167 ntBASIC0.52□□□□□ -2.33
MBD3O95983 Y_RNA.376-201ENST00000365638 108 ntBASIC0.52□□□□□ -2.33
MBD3O95983 Y_RNA.526-201ENST00000384572 110 ntBASIC0.52□□□□□ -2.33
MBD3O95983 Y_RNA.551-201ENST00000384661 102 ntBASIC0.52□□□□□ -2.33
MBD3O95983 AL590004.1-201ENST00000405321 300 ntBASIC0.52□□□□□ -2.33
MBD3O95983 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.52□□□□□ -2.33
MBD3O95983 FGF7P4-201ENST00000509595 295 ntBASIC0.52□□□□□ -2.33
MBD3O95983 RPS29P30-201ENST00000600975 111 ntBASIC0.52□□□□□ -2.33
MBD3O95983 DEFB117-201ENST00000602356 141 ntBASIC0.52□□□□□ -2.33
MBD3O95983 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.52□□□□□ -2.33
MBD3O95983 MIR5087-201ENST00000635826 76 ntBASIC0.52□□□□□ -2.33
MBD3O95983 MTND4LP32-201ENST00000636111 270 ntBASIC0.52□□□□□ -2.33
MBD3O95983 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.51□□□□□ -2.33
MBD3O95983 Y_RNA.36-201ENST00000362602 112 ntBASIC0.51□□□□□ -2.33
MBD3O95983 Y_RNA.39-201ENST00000362620 98 ntBASIC0.51□□□□□ -2.33
MBD3O95983 RNU6-654P-201ENST00000364373 107 ntBASIC0.51□□□□□ -2.33
MBD3O95983 Y_RNA.252-201ENST00000364556 101 ntBASIC0.51□□□□□ -2.33
MBD3O95983 RNU6-945P-201ENST00000383947 107 ntBASIC0.51□□□□□ -2.33
MBD3O95983 MIR802-201ENST00000390235 94 ntBASIC0.51□□□□□ -2.33
MBD3O95983 RBMX2P4-201ENST00000441256 376 ntBASIC0.51□□□□□ -2.33
MBD3O95983 RNU6-437P-201ENST00000459408 95 ntBASIC0.51□□□□□ -2.33
MBD3O95983 RNU2-13P-201ENST00000515909 113 ntBASIC0.51□□□□□ -2.33
MBD3O95983 UBE2V2P2-201ENST00000587677 504 ntBASIC0.51□□□□□ -2.33
MBD3O95983 RNA5SP347-201ENST00000362445 119 ntBASIC0.5□□□□□ -2.33
MBD3O95983 RNU6-1115P-201ENST00000362490 106 ntBASIC0.5□□□□□ -2.33
MBD3O95983 Y_RNA.354-201ENST00000365448 111 ntBASIC0.5□□□□□ -2.33
MBD3O95983 U8.20-201ENST00000459445 131 ntBASIC0.5□□□□□ -2.33
MBD3O95983 SCARNA8-201ENST00000515924 131 ntBASIC0.5□□□□□ -2.33
MBD3O95983 RNA5SP480-201ENST00000516840 109 ntBASIC0.5□□□□□ -2.33
MBD3O95983 RNU7-110P-201ENST00000516891 62 ntBASIC0.5□□□□□ -2.33
MBD3O95983 MIR4714-201ENST00000580728 77 ntBASIC0.5□□□□□ -2.33
MBD3O95983 AL132765.2-201ENST00000610812 351 ntBASIC0.5□□□□□ -2.33
MBD3O95983 Y_RNA.439-201ENST00000384119 94 ntBASIC0.49□□□□□ -2.33
MBD3O95983 SNORA51.10-201ENST00000384418 136 ntBASIC0.49□□□□□ -2.33
MBD3O95983 RNU6-342P-201ENST00000384521 104 ntBASIC0.49□□□□□ -2.33
MBD3O95983 SNORA2B-201ENST00000384583 137 ntBASIC0.49□□□□□ -2.33
MBD3O95983 MIR216A-201ENST00000385063 110 ntBASIC0.49□□□□□ -2.33
MBD3O95983 SNORA36B-201ENST00000410438 131 ntBASIC0.49□□□□□ -2.33
MBD3O95983 RNU6-847P-201ENST00000411115 108 ntBASIC0.49□□□□□ -2.33
MBD3O95983 RN7SKP12-201ENST00000516275 143 ntBASIC0.49□□□□□ -2.33
MBD3O95983 RNU4-77P-201ENST00000516692 156 ntBASIC0.49□□□□□ -2.33
MBD3O95983 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.49□□□□□ -2.33
MBD3O95983 AL606534.2-204ENST00000635008 178 ntBASIC0.49□□□□□ -2.33
MBD3O95983 RNU4-50P-201ENST00000364361 141 ntBASIC0.48□□□□□ -2.33
MBD3O95983 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.48□□□□□ -2.33
MBD3O95983 RNU4-57P-201ENST00000515980 135 ntBASIC0.48□□□□□ -2.33
MBD3O95983 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.48□□□□□ -2.33
MBD3O95983 AC011195.1-201ENST00000578177 177 ntBASIC0.48□□□□□ -2.33
MBD3O95983 Z83818.1-201ENST00000603584 150 ntBASIC0.48□□□□□ -2.33
MBD3O95983 MIR4791-201ENST00000607666 84 ntBASIC0.48□□□□□ -2.33
MBD3O95983 RNA5SP499-201ENST00000363982 119 ntBASIC0.47□□□□□ -2.33
MBD3O95983 SNORA72.4-201ENST00000384174 132 ntBASIC0.47□□□□□ -2.33
MBD3O95983 Y_RNA.496-201ENST00000384444 101 ntBASIC0.47□□□□□ -2.33
MBD3O95983 RNU6-21P-201ENST00000384710 107 ntBASIC0.47□□□□□ -2.33
MBD3O95983 MTCO2P33-201ENST00000402100 465 ntBASIC0.47□□□□□ -2.33
MBD3O95983 RNU6-177P-201ENST00000411257 104 ntBASIC0.47□□□□□ -2.33
MBD3O95983 AL160004.2-201ENST00000432935 350 ntBASIC0.47□□□□□ -2.33
MBD3O95983 SNORD11-201ENST00000459124 84 ntBASIC0.47□□□□□ -2.33
MBD3O95983 SEPT14P8-201ENST00000508026 178 ntBASIC0.47□□□□□ -2.33
MBD3O95983 RNU6-475P-201ENST00000516073 104 ntBASIC0.47□□□□□ -2.33
MBD3O95983 RNU6-976P-201ENST00000516086 111 ntBASIC0.47□□□□□ -2.33
MBD3O95983 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.47□□□□□ -2.33
MBD3O95983 AC092447.9-201ENST00000603395 144 ntBASIC0.47□□□□□ -2.33
MBD3O95983 SNORD113-5-201ENST00000607261 78 ntBASIC0.47□□□□□ -2.33
MBD3O95983 AC122108.2-201ENST00000611946 526 ntBASIC0.47□□□□□ -2.33
MBD3O95983 AC084781.2-201ENST00000615568 161 ntBASIC0.47□□□□□ -2.33
MBD3O95983 MTND1P7-201ENST00000632801 297 ntBASIC0.47□□□□□ -2.33
MBD3O95983 MIR1302-1-201ENST00000637932 143 ntBASIC0.47□□□□□ -2.33
MBD3O95983 RNU4-45P-201ENST00000365469 141 ntBASIC0.46□□□□□ -2.34
MBD3O95983 RNU6-1237P-201ENST00000384777 107 ntBASIC0.46□□□□□ -2.34
MBD3O95983 AL603910.2-201ENST00000407268 136 ntBASIC0.46□□□□□ -2.34
MBD3O95983 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
MBD3O95983 RNU7-141P-201ENST00000459304 62 ntBASIC0.46□□□□□ -2.34
MBD3O95983 MIR548AO-201ENST00000579992 96 ntBASIC0.46□□□□□ -2.34
MBD3O95983 MIR4300-201ENST00000581016 96 ntBASIC0.46□□□□□ -2.34
MBD3O95983 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.46□□□□□ -2.34
MBD3O95983 MIR6513-201ENST00000621188 64 ntBASIC0.46□□□□□ -2.34
MBD3O95983 RNU6-369P-201ENST00000362515 102 ntBASIC0.45□□□□□ -2.34
MBD3O95983 RNU6-801P-201ENST00000364087 105 ntBASIC0.45□□□□□ -2.34
MBD3O95983 RNY3-201ENST00000365484 102 ntBASIC0.45□□□□□ -2.34
MBD3O95983 Y_RNA.383-201ENST00000383855 97 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 204.6 ms