Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 RNU4-57P-201ENST00000515980 135 ntBASIC0.4□□□□□ -2.35
RAB3DO95716 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.4□□□□□ -2.35
RAB3DO95716 PART1_1.1-201ENST00000611761 217 ntBASIC0.4□□□□□ -2.35
RAB3DO95716 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.4□□□□□ -2.35
RAB3DO95716 Y_RNA.58-201ENST00000362807 102 ntBASIC0.39□□□□□ -2.35
RAB3DO95716 SNORA72.1-201ENST00000363485 129 ntBASIC0.39□□□□□ -2.35
RAB3DO95716 Y_RNA.154-201ENST00000363624 102 ntBASIC0.39□□□□□ -2.35
RAB3DO95716 RNU6-674P-201ENST00000363831 107 ntBASIC0.39□□□□□ -2.35
RAB3DO95716 Y_RNA.252-201ENST00000364556 101 ntBASIC0.39□□□□□ -2.35
RAB3DO95716 RNU6-392P-201ENST00000364926 101 ntBASIC0.39□□□□□ -2.35
RAB3DO95716 RNY3P1-201ENST00000365085 102 ntBASIC0.39□□□□□ -2.35
RAB3DO95716 RNY3-201ENST00000365484 102 ntBASIC0.39□□□□□ -2.35
RAB3DO95716 RNU6-125P-201ENST00000384505 107 ntBASIC0.39□□□□□ -2.35
RAB3DO95716 Y_RNA.537-201ENST00000384626 109 ntBASIC0.39□□□□□ -2.35
RAB3DO95716 RNU6-1237P-201ENST00000384777 107 ntBASIC0.39□□□□□ -2.35
RAB3DO95716 SNORD83.1-201ENST00000411362 77 ntBASIC0.39□□□□□ -2.35
RAB3DO95716 AC090844.1-201ENST00000422019 156 ntBASIC0.39□□□□□ -2.35
RAB3DO95716 U8.20-201ENST00000459445 131 ntBASIC0.39□□□□□ -2.35
RAB3DO95716 RN7SL429P-201ENST00000479090 223 ntBASIC0.39□□□□□ -2.35
RAB3DO95716 RN7SL489P-201ENST00000486185 223 ntBASIC0.39□□□□□ -2.35
RAB3DO95716 RN7SL327P-201ENST00000488659 223 ntBASIC0.39□□□□□ -2.35
RAB3DO95716 SNORA40.14-201ENST00000516543 86 ntBASIC0.39□□□□□ -2.35
RAB3DO95716 MIR2681-201ENST00000581814 105 ntBASIC0.39□□□□□ -2.35
RAB3DO95716 AC006441.5-201ENST00000612680 209 ntBASIC0.39□□□□□ -2.35
RAB3DO95716 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.39□□□□□ -2.35
RAB3DO95716 RN7SL853P-201ENST00000617250 223 ntBASIC0.39□□□□□ -2.35
RAB3DO95716 AC068700.1-201ENST00000565862 3754 ntBASIC0.39□□□□□ -2.35
RAB3DO95716 Y_RNA.303-201ENST00000364998 94 ntBASIC0.38□□□□□ -2.35
RAB3DO95716 Y_RNA.471-201ENST00000384312 102 ntBASIC0.38□□□□□ -2.35
RAB3DO95716 Y_RNA.529-201ENST00000384586 119 ntBASIC0.38□□□□□ -2.35
RAB3DO95716 POLR2KP2-201ENST00000438155 177 ntBASIC0.38□□□□□ -2.35
RAB3DO95716 AC092473.1-201ENST00000441098 221 ntBASIC0.38□□□□□ -2.35
RAB3DO95716 RNU2-13P-201ENST00000515909 113 ntBASIC0.38□□□□□ -2.35
RAB3DO95716 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.38□□□□□ -2.35
RAB3DO95716 RMST_2.1-201ENST00000617263 136 ntBASIC0.38□□□□□ -2.35
RAB3DO95716 AC243994.1-201ENST00000618627 109 ntBASIC0.38□□□□□ -2.35
RAB3DO95716 MIR6767-201ENST00000637302 66 ntBASIC0.38□□□□□ -2.35
RAB3DO95716 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.37□□□□□ -2.35
RAB3DO95716 RNA5SP99-201ENST00000364020 114 ntBASIC0.37□□□□□ -2.35
RAB3DO95716 RNU6-934P-201ENST00000365154 107 ntBASIC0.37□□□□□ -2.35
RAB3DO95716 RNU6-580P-201ENST00000365159 107 ntBASIC0.37□□□□□ -2.35
RAB3DO95716 RNU1-115P-201ENST00000365329 160 ntBASIC0.37□□□□□ -2.35
RAB3DO95716 RNY1P14-201ENST00000384426 108 ntBASIC0.37□□□□□ -2.35
RAB3DO95716 Y_RNA.494-201ENST00000384432 111 ntBASIC0.37□□□□□ -2.35
RAB3DO95716 FGF7P4-201ENST00000509595 295 ntBASIC0.37□□□□□ -2.35
RAB3DO95716 RN7SKP12-201ENST00000516275 143 ntBASIC0.37□□□□□ -2.35
RAB3DO95716 RNU6-1046P-201ENST00000516538 107 ntBASIC0.37□□□□□ -2.35
RAB3DO95716 RNU7-25P-201ENST00000516544 62 ntBASIC0.37□□□□□ -2.35
RAB3DO95716 Y_RNA.315-201ENST00000365117 102 ntBASIC0.36□□□□□ -2.35
RAB3DO95716 Y_RNA.418-201ENST00000384029 102 ntBASIC0.36□□□□□ -2.35
RAB3DO95716 MIR520F-201ENST00000384824 87 ntBASIC0.36□□□□□ -2.35
RAB3DO95716 MIR520H-201ENST00000385126 88 ntBASIC0.36□□□□□ -2.35
RAB3DO95716 RNU6-308P-201ENST00000390957 107 ntBASIC0.36□□□□□ -2.35
RAB3DO95716 RNU6-847P-201ENST00000411115 108 ntBASIC0.36□□□□□ -2.35
RAB3DO95716 AC244023.1-201ENST00000426884 112 ntBASIC0.36□□□□□ -2.35
RAB3DO95716 MTCO2P12-201ENST00000427426 682 ntBASIC0.36□□□□□ -2.35
RAB3DO95716 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.36□□□□□ -2.35
RAB3DO95716 RNU6-191P-201ENST00000516295 94 ntBASIC0.36□□□□□ -2.35
RAB3DO95716 RNU6-875P-201ENST00000516488 106 ntBASIC0.36□□□□□ -2.35
RAB3DO95716 AC242498.1-201ENST00000604134 111 ntBASIC0.36□□□□□ -2.35
RAB3DO95716 LARP7P1-201ENST00000605576 316 ntBASIC0.36□□□□□ -2.35
RAB3DO95716 AC006157.1-201ENST00000611750 366 ntBASIC0.36□□□□□ -2.35
RAB3DO95716 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
RAB3DO95716 Y_RNA.70-201ENST00000362886 110 ntBASIC0.35□□□□□ -2.35
RAB3DO95716 SNORA1.2-201ENST00000365189 134 ntBASIC0.35□□□□□ -2.35
RAB3DO95716 Y_RNA.356-201ENST00000365475 113 ntBASIC0.35□□□□□ -2.35
RAB3DO95716 Y_RNA.376-201ENST00000365638 108 ntBASIC0.35□□□□□ -2.35
RAB3DO95716 Y_RNA.547-201ENST00000384654 119 ntBASIC0.35□□□□□ -2.35
RAB3DO95716 MIR573-201ENST00000384964 99 ntBASIC0.35□□□□□ -2.35
RAB3DO95716 MT-TN-201ENST00000387400 73 ntBASIC0.35□□□□□ -2.35
RAB3DO95716 RNU6-383P-201ENST00000410864 94 ntBASIC0.35□□□□□ -2.35
RAB3DO95716 RNU6-177P-201ENST00000411257 104 ntBASIC0.35□□□□□ -2.35
RAB3DO95716 AC114737.2-201ENST00000421583 173 ntBASIC0.35□□□□□ -2.35
RAB3DO95716 SEPT14P8-201ENST00000508026 178 ntBASIC0.35□□□□□ -2.35
RAB3DO95716 RNU6-507P-201ENST00000516045 100 ntBASIC0.35□□□□□ -2.35
RAB3DO95716 RNU6-977P-201ENST00000516411 103 ntBASIC0.35□□□□□ -2.35
RAB3DO95716 AC040926.1-201ENST00000530195 238 ntBASIC0.35□□□□□ -2.35
RAB3DO95716 MIR4771-2-201ENST00000577758 74 ntBASIC0.35□□□□□ -2.35
RAB3DO95716 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.35□□□□□ -2.35
RAB3DO95716 MIR4771-1-201ENST00000582617 74 ntBASIC0.35□□□□□ -2.35
RAB3DO95716 Z83818.1-201ENST00000603584 150 ntBASIC0.35□□□□□ -2.35
RAB3DO95716 SNORD113-5-201ENST00000607261 78 ntBASIC0.35□□□□□ -2.35
RAB3DO95716 AC007485.1-201ENST00000616755 206 ntBASIC0.35□□□□□ -2.35
RAB3DO95716 AL138825.1-201ENST00000618587 192 ntBASIC0.35□□□□□ -2.35
RAB3DO95716 RNU6-102P-201ENST00000384485 104 ntBASIC0.34□□□□□ -2.36
RAB3DO95716 MIR140-201ENST00000385282 100 ntBASIC0.34□□□□□ -2.36
RAB3DO95716 RNU6-763P-201ENST00000390865 106 ntBASIC0.34□□□□□ -2.36
RAB3DO95716 Y_RNA.579-201ENST00000390939 94 ntBASIC0.34□□□□□ -2.36
RAB3DO95716 SNORA68.3-201ENST00000515906 83 ntBASIC0.34□□□□□ -2.36
RAB3DO95716 SCARNA8-201ENST00000515924 131 ntBASIC0.34□□□□□ -2.36
RAB3DO95716 RNU6-976P-201ENST00000516086 111 ntBASIC0.34□□□□□ -2.36
RAB3DO95716 AP000753.3-201ENST00000604083 169 ntBASIC0.34□□□□□ -2.36
RAB3DO95716 AC020891.4-201ENST00000605745 93 ntBASIC0.34□□□□□ -2.36
RAB3DO95716 uc_338.6-201ENST00000613544 171 ntBASIC0.34□□□□□ -2.36
RAB3DO95716 uc_338.4-201ENST00000616635 176 ntBASIC0.34□□□□□ -2.36
RAB3DO95716 AC112487.2-201ENST00000637950 304 ntBASIC0.34□□□□□ -2.36
RAB3DO95716 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.33□□□□□ -2.36
RAB3DO95716 MIR377-201ENST00000362145 69 ntBASIC0.33□□□□□ -2.36
RAB3DO95716 SNORD113-8-201ENST00000363497 74 ntBASIC0.33□□□□□ -2.36
RAB3DO95716 Y_RNA.222-201ENST00000364264 102 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 273.5 ms