Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 POLR2KP2-201ENST00000438155 177 ntBASIC0.73□□□□□ -2.29
CTDNEP1O95476 RPL23AP54-201ENST00000495129 419 ntBASIC0.73□□□□□ -2.29
CTDNEP1O95476 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.73□□□□□ -2.29
CTDNEP1O95476 ACA64.5-201ENST00000516207 127 ntBASIC0.73□□□□□ -2.29
CTDNEP1O95476 RNU6-764P-201ENST00000516396 105 ntBASIC0.73□□□□□ -2.29
CTDNEP1O95476 SNORD111.1-201ENST00000516421 86 ntBASIC0.73□□□□□ -2.29
CTDNEP1O95476 RNU7-116P-201ENST00000516940 62 ntBASIC0.73□□□□□ -2.29
CTDNEP1O95476 Y_RNA.713-201ENST00000517013 96 ntBASIC0.73□□□□□ -2.29
CTDNEP1O95476 AC136628.3-201ENST00000521868 290 ntBASIC0.73□□□□□ -2.29
CTDNEP1O95476 AP003716.2-201ENST00000528260 108 ntBASIC0.73□□□□□ -2.29
CTDNEP1O95476 MIR3171-201ENST00000584270 74 ntBASIC0.73□□□□□ -2.29
CTDNEP1O95476 AL391903.3-201ENST00000612158 163 ntBASIC0.73□□□□□ -2.29
CTDNEP1O95476 AC134503.1-201ENST00000633048 54 ntBASIC0.73□□□□□ -2.29
CTDNEP1O95476 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CTDNEP1O95476 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CTDNEP1O95476 RNU6-1084P-201ENST00000362498 107 ntBASIC0.72□□□□□ -2.29
CTDNEP1O95476 snoU2_19.2-201ENST00000363024 80 ntBASIC0.72□□□□□ -2.29
CTDNEP1O95476 Y_RNA.214-201ENST00000364201 112 ntBASIC0.72□□□□□ -2.29
CTDNEP1O95476 Y_RNA.389-201ENST00000383924 113 ntBASIC0.72□□□□□ -2.29
CTDNEP1O95476 Y_RNA.527-201ENST00000384573 102 ntBASIC0.72□□□□□ -2.29
CTDNEP1O95476 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
CTDNEP1O95476 SNORA75.2-201ENST00000391138 150 ntBASIC0.72□□□□□ -2.29
CTDNEP1O95476 RNU6-131P-201ENST00000391144 107 ntBASIC0.72□□□□□ -2.29
CTDNEP1O95476 SNORA75.3-201ENST00000391231 150 ntBASIC0.72□□□□□ -2.29
CTDNEP1O95476 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.72□□□□□ -2.29
CTDNEP1O95476 MIR548P-201ENST00000408336 84 ntBASIC0.72□□□□□ -2.29
CTDNEP1O95476 RPL21P38-201ENST00000418090 167 ntBASIC0.72□□□□□ -2.29
CTDNEP1O95476 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.72□□□□□ -2.29
CTDNEP1O95476 SNRPGP14-201ENST00000435400 219 ntBASIC0.72□□□□□ -2.29
CTDNEP1O95476 MRPS35P2-201ENST00000508242 191 ntBASIC0.72□□□□□ -2.29
CTDNEP1O95476 RNU7-41P-201ENST00000515917 61 ntBASIC0.72□□□□□ -2.29
CTDNEP1O95476 AC005357.1-201ENST00000588399 301 ntBASIC0.72□□□□□ -2.29
CTDNEP1O95476 AL357312.1-201ENST00000603879 298 ntBASIC0.72□□□□□ -2.29
CTDNEP1O95476 Y_RNA.136-201ENST00000363444 102 ntBASIC0.71□□□□□ -2.3
CTDNEP1O95476 snoU2-30.1-201ENST00000365012 70 ntBASIC0.71□□□□□ -2.3
CTDNEP1O95476 Y_RNA.541-201ENST00000384640 113 ntBASIC0.71□□□□□ -2.3
CTDNEP1O95476 RNU6-763P-201ENST00000390865 106 ntBASIC0.71□□□□□ -2.3
CTDNEP1O95476 Y_RNA.581-201ENST00000391017 97 ntBASIC0.71□□□□□ -2.3
CTDNEP1O95476 SNORA36B-201ENST00000410438 131 ntBASIC0.71□□□□□ -2.3
CTDNEP1O95476 MTCO2P12-201ENST00000427426 682 ntBASIC0.71□□□□□ -2.3
CTDNEP1O95476 MTCO1P5-201ENST00000433573 344 ntBASIC0.71□□□□□ -2.3
CTDNEP1O95476 MTCYBP6-201ENST00000441810 138 ntBASIC0.71□□□□□ -2.3
CTDNEP1O95476 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.71□□□□□ -2.3
CTDNEP1O95476 LINC01399-202ENST00000458450 244 ntBASIC0.71□□□□□ -2.3
CTDNEP1O95476 U8.19-201ENST00000459095 133 ntBASIC0.71□□□□□ -2.3
CTDNEP1O95476 Y_RNA.637-201ENST00000459424 114 ntBASIC0.71□□□□□ -2.3
CTDNEP1O95476 SNORA31.4-201ENST00000516049 129 ntBASIC0.71□□□□□ -2.3
CTDNEP1O95476 SNORA18.7-201ENST00000516910 131 ntBASIC0.71□□□□□ -2.3
CTDNEP1O95476 SNORA74.3-201ENST00000517108 154 ntBASIC0.71□□□□□ -2.3
CTDNEP1O95476 MIR4680-201ENST00000580906 66 ntBASIC0.71□□□□□ -2.3
CTDNEP1O95476 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.71□□□□□ -2.3
CTDNEP1O95476 SNORA25.3-201ENST00000363205 127 ntBASIC0.7□□□□□ -2.3
CTDNEP1O95476 RNA5SP499-201ENST00000363982 119 ntBASIC0.7□□□□□ -2.3
CTDNEP1O95476 SNORA63.7-201ENST00000365579 123 ntBASIC0.7□□□□□ -2.3
CTDNEP1O95476 MIR136-201ENST00000385207 82 ntBASIC0.7□□□□□ -2.3
CTDNEP1O95476 SNORD72-201ENST00000390994 80 ntBASIC0.7□□□□□ -2.3
CTDNEP1O95476 AL603910.2-201ENST00000407268 136 ntBASIC0.7□□□□□ -2.3
CTDNEP1O95476 MIR548J-201ENST00000408833 112 ntBASIC0.7□□□□□ -2.3
CTDNEP1O95476 RNU6-101P-201ENST00000410323 104 ntBASIC0.7□□□□□ -2.3
CTDNEP1O95476 AC024067.1-201ENST00000426199 223 ntBASIC0.7□□□□□ -2.3
CTDNEP1O95476 AC245047.8-201ENST00000456455 284 ntBASIC0.7□□□□□ -2.3
CTDNEP1O95476 SNORD11-201ENST00000459124 84 ntBASIC0.7□□□□□ -2.3
CTDNEP1O95476 RNU6-437P-201ENST00000459408 95 ntBASIC0.7□□□□□ -2.3
CTDNEP1O95476 SNORD123-201ENST00000459473 70 ntBASIC0.7□□□□□ -2.3
CTDNEP1O95476 SNORD124-201ENST00000459577 104 ntBASIC0.7□□□□□ -2.3
CTDNEP1O95476 RNU6-988P-201ENST00000519081 107 ntBASIC0.7□□□□□ -2.3
CTDNEP1O95476 AC113195.1-201ENST00000579952 141 ntBASIC0.7□□□□□ -2.3
CTDNEP1O95476 MIR4714-201ENST00000580728 77 ntBASIC0.7□□□□□ -2.3
CTDNEP1O95476 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.7□□□□□ -2.3
CTDNEP1O95476 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.7□□□□□ -2.3
CTDNEP1O95476 MIR6788-201ENST00000618842 66 ntBASIC0.7□□□□□ -2.3
CTDNEP1O95476 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.7□□□□□ -2.3
CTDNEP1O95476 RNU6-797P-201ENST00000363101 109 ntBASIC0.69□□□□□ -2.3
CTDNEP1O95476 Y_RNA.116-201ENST00000363292 103 ntBASIC0.69□□□□□ -2.3
CTDNEP1O95476 Y_RNA.153-201ENST00000363615 91 ntBASIC0.69□□□□□ -2.3
CTDNEP1O95476 Y_RNA.158-201ENST00000363651 101 ntBASIC0.69□□□□□ -2.3
CTDNEP1O95476 RNU6-674P-201ENST00000363831 107 ntBASIC0.69□□□□□ -2.3
CTDNEP1O95476 Y_RNA.455-201ENST00000384230 98 ntBASIC0.69□□□□□ -2.3
CTDNEP1O95476 MIR100-201ENST00000385259 80 ntBASIC0.69□□□□□ -2.3
CTDNEP1O95476 SNORD28B-201ENST00000390993 75 ntBASIC0.69□□□□□ -2.3
CTDNEP1O95476 MTCO2P33-201ENST00000402100 465 ntBASIC0.69□□□□□ -2.3
CTDNEP1O95476 MIR1185-1-201ENST00000408598 86 ntBASIC0.69□□□□□ -2.3
CTDNEP1O95476 AC006461.1-201ENST00000412637 326 ntBASIC0.69□□□□□ -2.3
CTDNEP1O95476 AC063976.4-201ENST00000421971 163 ntBASIC0.69□□□□□ -2.3
CTDNEP1O95476 AL606490.4-201ENST00000423117 127 ntBASIC0.69□□□□□ -2.3
CTDNEP1O95476 RPL39P39-201ENST00000455840 151 ntBASIC0.69□□□□□ -2.3
CTDNEP1O95476 RNU7-21P-201ENST00000459430 62 ntBASIC0.69□□□□□ -2.3
CTDNEP1O95476 PSMC1P5-201ENST00000512850 177 ntBASIC0.69□□□□□ -2.3
CTDNEP1O95476 RNA5SP220-201ENST00000516298 104 ntBASIC0.69□□□□□ -2.3
CTDNEP1O95476 RNU6-1153P-201ENST00000516760 105 ntBASIC0.69□□□□□ -2.3
CTDNEP1O95476 AC131281.1-201ENST00000522984 164 ntBASIC0.69□□□□□ -2.3
CTDNEP1O95476 RPL23AP91-201ENST00000569211 455 ntBASIC0.69□□□□□ -2.3
CTDNEP1O95476 MIR4764-201ENST00000580680 88 ntBASIC0.69□□□□□ -2.3
CTDNEP1O95476 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.69□□□□□ -2.3
CTDNEP1O95476 AC008507.4-201ENST00000585464 127 ntBASIC0.69□□□□□ -2.3
CTDNEP1O95476 MIR6734-201ENST00000621166 68 ntBASIC0.69□□□□□ -2.3
CTDNEP1O95476 Y_RNA.16-201ENST00000362421 102 ntBASIC0.68□□□□□ -2.3
CTDNEP1O95476 RNU4-90P-201ENST00000362773 141 ntBASIC0.68□□□□□ -2.3
CTDNEP1O95476 Y_RNA.64-201ENST00000362845 102 ntBASIC0.68□□□□□ -2.3
CTDNEP1O95476 RNA5SP264-201ENST00000363115 107 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms