Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 RNA5SP331-201ENST00000364986 107 ntBASIC0.98□□□□□ -2.25
SIX3O95343 Y_RNA.310-201ENST00000365063 113 ntBASIC0.98□□□□□ -2.25
SIX3O95343 AC117470.1-201ENST00000381974 330 ntBASIC0.98□□□□□ -2.25
SIX3O95343 Y_RNA.383-201ENST00000383855 97 ntBASIC0.98□□□□□ -2.25
SIX3O95343 AF228730.4-201ENST00000421457 183 ntBASIC0.98□□□□□ -2.25
SIX3O95343 RNU6-1007P-201ENST00000516586 107 ntBASIC0.98□□□□□ -2.25
SIX3O95343 RNU11-2P-201ENST00000516898 142 ntBASIC0.98□□□□□ -2.25
SIX3O95343 CYP3A137P-201ENST00000562436 69 ntBASIC0.98□□□□□ -2.25
SIX3O95343 MIR4764-201ENST00000580680 88 ntBASIC0.98□□□□□ -2.25
SIX3O95343 MIR2681-201ENST00000581814 105 ntBASIC0.98□□□□□ -2.25
SIX3O95343 MIR3192-201ENST00000584920 77 ntBASIC0.98□□□□□ -2.25
SIX3O95343 AP003357.1-201ENST00000604497 148 ntBASIC0.98□□□□□ -2.25
SIX3O95343 SNORD113-5-201ENST00000607261 78 ntBASIC0.98□□□□□ -2.25
SIX3O95343 AL391903.3-201ENST00000612158 163 ntBASIC0.98□□□□□ -2.25
SIX3O95343 AC007485.1-201ENST00000616755 206 ntBASIC0.98□□□□□ -2.25
SIX3O95343 RNA5SP264-201ENST00000363115 107 ntBASIC0.97□□□□□ -2.25
SIX3O95343 RNU4-38P-201ENST00000364472 129 ntBASIC0.97□□□□□ -2.25
SIX3O95343 RNU6-442P-201ENST00000383968 104 ntBASIC0.97□□□□□ -2.25
SIX3O95343 SNORD63-201ENST00000384262 68 ntBASIC0.97□□□□□ -2.25
SIX3O95343 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
SIX3O95343 AL358176.2-201ENST00000425769 204 ntBASIC0.97□□□□□ -2.25
SIX3O95343 RNU7-21P-201ENST00000459430 62 ntBASIC0.97□□□□□ -2.25
SIX3O95343 AC087343.1-201ENST00000477341 475 ntBASIC0.97□□□□□ -2.25
SIX3O95343 RNU7-115P-201ENST00000516433 55 ntBASIC0.97□□□□□ -2.25
SIX3O95343 RNU7-43P-201ENST00000516554 64 ntBASIC0.97□□□□□ -2.25
SIX3O95343 AL133255.1-201ENST00000606374 441 ntBASIC0.97□□□□□ -2.25
SIX3O95343 AC103810.9-201ENST00000606688 112 ntBASIC0.97□□□□□ -2.25
SIX3O95343 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.97□□□□□ -2.25
SIX3O95343 SNORD81.1-201ENST00000363064 77 ntBASIC0.96□□□□□ -2.26
SIX3O95343 RNA5SP48-201ENST00000363969 126 ntBASIC0.96□□□□□ -2.26
SIX3O95343 U8.7-201ENST00000364940 136 ntBASIC0.96□□□□□ -2.26
SIX3O95343 SNORA22-201ENST00000383907 134 ntBASIC0.96□□□□□ -2.26
SIX3O95343 SNORA22C-201ENST00000384614 134 ntBASIC0.96□□□□□ -2.26
SIX3O95343 SNORA75.2-201ENST00000391138 150 ntBASIC0.96□□□□□ -2.26
SIX3O95343 SNORA75.3-201ENST00000391231 150 ntBASIC0.96□□□□□ -2.26
SIX3O95343 SNORD123-201ENST00000459473 70 ntBASIC0.96□□□□□ -2.26
SIX3O95343 AC127455.1-201ENST00000565496 145 ntBASIC0.96□□□□□ -2.26
SIX3O95343 AC087685.1-201ENST00000587507 141 ntBASIC0.96□□□□□ -2.26
SIX3O95343 AC124312.5-201ENST00000604451 268 ntBASIC0.96□□□□□ -2.26
SIX3O95343 AC090971.5-201ENST00000621102 293 ntBASIC0.96□□□□□ -2.26
SIX3O95343 AL391516.1-201ENST00000554380 2449 ntBASIC0.95□□□□□ -2.26
SIX3O95343 MIR369-201ENST00000362155 70 ntBASIC0.95□□□□□ -2.26
SIX3O95343 RNU4-80P-201ENST00000363200 141 ntBASIC0.95□□□□□ -2.26
SIX3O95343 Y_RNA.445-201ENST00000384168 102 ntBASIC0.95□□□□□ -2.26
SIX3O95343 RNU6-1067P-201ENST00000384752 107 ntBASIC0.95□□□□□ -2.26
SIX3O95343 MIR1265-201ENST00000408444 86 ntBASIC0.95□□□□□ -2.26
SIX3O95343 HMGN1P10-201ENST00000474557 553 ntBASIC0.95□□□□□ -2.26
SIX3O95343 RNU6-475P-201ENST00000516073 104 ntBASIC0.95□□□□□ -2.26
SIX3O95343 RNU6-397P-201ENST00000516226 104 ntBASIC0.95□□□□□ -2.26
SIX3O95343 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.95□□□□□ -2.26
SIX3O95343 PRELID3BP2-201ENST00000605362 201 ntBASIC0.95□□□□□ -2.26
SIX3O95343 MIR373-201ENST00000362273 69 ntBASIC0.94□□□□□ -2.26
SIX3O95343 Y_RNA.136-201ENST00000363444 102 ntBASIC0.94□□□□□ -2.26
SIX3O95343 Y_RNA.148-201ENST00000363557 117 ntBASIC0.94□□□□□ -2.26
SIX3O95343 Y_RNA.280-201ENST00000364765 112 ntBASIC0.94□□□□□ -2.26
SIX3O95343 Y_RNA.549-201ENST00000384657 102 ntBASIC0.94□□□□□ -2.26
SIX3O95343 MIR1302-11-201ENST00000408051 138 ntBASIC0.94□□□□□ -2.26
SIX3O95343 MIR1302-9-201ENST00000408365 138 ntBASIC0.94□□□□□ -2.26
SIX3O95343 MIR1302-10-201ENST00000408734 138 ntBASIC0.94□□□□□ -2.26
SIX3O95343 Y_RNA.602-201ENST00000410535 92 ntBASIC0.94□□□□□ -2.26
SIX3O95343 AC023449.1-201ENST00000454464 154 ntBASIC0.94□□□□□ -2.26
SIX3O95343 RNU6-437P-201ENST00000459408 95 ntBASIC0.94□□□□□ -2.26
SIX3O95343 AL117351.2-201ENST00000513571 157 ntBASIC0.94□□□□□ -2.26
SIX3O95343 RNU7-41P-201ENST00000515917 61 ntBASIC0.94□□□□□ -2.26
SIX3O95343 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.94□□□□□ -2.26
SIX3O95343 MIR1302-2-201ENST00000607096 138 ntBASIC0.94□□□□□ -2.26
SIX3O95343 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.94□□□□□ -2.26
SIX3O95343 MIR376A1-201ENST00000616574 68 ntBASIC0.94□□□□□ -2.26
SIX3O95343 RNU6-1209P-201ENST00000363655 107 ntBASIC0.93□□□□□ -2.26
SIX3O95343 Y_RNA.242-201ENST00000364473 110 ntBASIC0.93□□□□□ -2.26
SIX3O95343 Y_RNA.813-201ENST00000364639 102 ntBASIC0.93□□□□□ -2.26
SIX3O95343 RNU6-969P-201ENST00000383900 105 ntBASIC0.93□□□□□ -2.26
SIX3O95343 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.93□□□□□ -2.26
SIX3O95343 SNORA36B-201ENST00000410438 131 ntBASIC0.93□□□□□ -2.26
SIX3O95343 RPS3AP1-201ENST00000413190 320 ntBASIC0.93□□□□□ -2.26
SIX3O95343 MTND4LP11-201ENST00000422184 280 ntBASIC0.93□□□□□ -2.26
SIX3O95343 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.93□□□□□ -2.26
SIX3O95343 FABP5P4-201ENST00000437203 171 ntBASIC0.93□□□□□ -2.26
SIX3O95343 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
SIX3O95343 RPL23AP91-201ENST00000569211 455 ntBASIC0.93□□□□□ -2.26
SIX3O95343 AC023827.1-201ENST00000569247 97 ntBASIC0.93□□□□□ -2.26
SIX3O95343 SNORD113-8-201ENST00000363497 74 ntBASIC0.92□□□□□ -2.26
SIX3O95343 RNU6-308P-201ENST00000390957 107 ntBASIC0.92□□□□□ -2.26
SIX3O95343 RNU6-101P-201ENST00000410323 104 ntBASIC0.92□□□□□ -2.26
SIX3O95343 AC067940.1-201ENST00000458411 300 ntBASIC0.92□□□□□ -2.26
SIX3O95343 RNU7-141P-201ENST00000459304 62 ntBASIC0.92□□□□□ -2.26
SIX3O95343 RPS26P48-201ENST00000491713 339 ntBASIC0.92□□□□□ -2.26
SIX3O95343 ACA64.5-201ENST00000516207 127 ntBASIC0.92□□□□□ -2.26
SIX3O95343 MIR6513-201ENST00000621188 64 ntBASIC0.92□□□□□ -2.26
SIX3O95343 uc_338.22-201ENST00000622722 187 ntBASIC0.92□□□□□ -2.26
SIX3O95343 AC090574.1-201ENST00000623186 233 ntBASIC0.92□□□□□ -2.26
SIX3O95343 RNU6-1048P-201ENST00000364054 107 ntBASIC0.91□□□□□ -2.26
SIX3O95343 Y_RNA.389-201ENST00000383924 113 ntBASIC0.91□□□□□ -2.26
SIX3O95343 Y_RNA.419-201ENST00000384041 102 ntBASIC0.91□□□□□ -2.26
SIX3O95343 MTCO2P33-201ENST00000402100 465 ntBASIC0.91□□□□□ -2.26
SIX3O95343 RNU6-994P-201ENST00000410507 111 ntBASIC0.91□□□□□ -2.26
SIX3O95343 RNU6-1046P-201ENST00000516538 107 ntBASIC0.91□□□□□ -2.26
SIX3O95343 AC136628.3-201ENST00000521868 290 ntBASIC0.91□□□□□ -2.26
SIX3O95343 AP001094.1-201ENST00000579805 193 ntBASIC0.91□□□□□ -2.26
SIX3O95343 AC104695.3-201ENST00000604052 296 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms