Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 AC107297.1-201ENST00000459991 176 ntBASIC-0.09□□□□□ -2.42
SNX4O95219 RNU4-49P-201ENST00000516080 140 ntBASIC-0.09□□□□□ -2.42
SNX4O95219 SNORA18.4-201ENST00000516440 124 ntBASIC-0.09□□□□□ -2.42
SNX4O95219 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.09□□□□□ -2.42
SNX4O95219 MIR2681-201ENST00000581814 105 ntBASIC-0.09□□□□□ -2.42
SNX4O95219 AL355297.3-201ENST00000604082 446 ntBASIC-0.09□□□□□ -2.42
SNX4O95219 PISRT1.1-201ENST00000616930 107 ntBASIC-0.09□□□□□ -2.42
SNX4O95219 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.09□□□□□ -2.42
SNX4O95219 Y_RNA.51-201ENST00000362725 102 ntBASIC-0.1□□□□□ -2.43
SNX4O95219 MIR5188-201ENST00000583467 113 ntBASIC-0.1□□□□□ -2.43
SNX4O95219 AC060780.3-201ENST00000589464 80 ntBASIC-0.1□□□□□ -2.43
SNX4O95219 AP003357.1-201ENST00000604497 148 ntBASIC-0.1□□□□□ -2.43
SNX4O95219 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.11□□□□□ -2.43
SNX4O95219 RNA5SP117-201ENST00000365294 118 ntBASIC-0.11□□□□□ -2.43
SNX4O95219 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.11□□□□□ -2.43
SNX4O95219 RNU6-20P-201ENST00000384106 107 ntBASIC-0.11□□□□□ -2.43
SNX4O95219 MIR625-201ENST00000385047 85 ntBASIC-0.11□□□□□ -2.43
SNX4O95219 MCFD2P1-201ENST00000417812 300 ntBASIC-0.11□□□□□ -2.43
SNX4O95219 PRDX4P1-201ENST00000507189 574 ntBASIC-0.11□□□□□ -2.43
SNX4O95219 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.11□□□□□ -2.43
SNX4O95219 MIR4290-201ENST00000583807 95 ntBASIC-0.11□□□□□ -2.43
SNX4O95219 AC008507.4-201ENST00000585464 127 ntBASIC-0.11□□□□□ -2.43
SNX4O95219 RNU6-626P-201ENST00000363354 107 ntBASIC-0.12□□□□□ -2.43
SNX4O95219 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.12□□□□□ -2.43
SNX4O95219 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.12□□□□□ -2.43
SNX4O95219 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.12□□□□□ -2.43
SNX4O95219 Y_RNA.482-201ENST00000384377 111 ntBASIC-0.12□□□□□ -2.43
SNX4O95219 RNU6-601P-201ENST00000384540 107 ntBASIC-0.12□□□□□ -2.43
SNX4O95219 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
SNX4O95219 SNORA75.6-201ENST00000391318 127 ntBASIC-0.12□□□□□ -2.43
SNX4O95219 MIR548K-201ENST00000408406 116 ntBASIC-0.12□□□□□ -2.43
SNX4O95219 RPS3AP52-201ENST00000435639 297 ntBASIC-0.12□□□□□ -2.43
SNX4O95219 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.12□□□□□ -2.43
SNX4O95219 AC006441.5-201ENST00000612680 209 ntBASIC-0.12□□□□□ -2.43
SNX4O95219 Y_RNA.89-201ENST00000363031 102 ntBASIC-0.13□□□□□ -2.43
SNX4O95219 MIR125B2-201ENST00000385128 89 ntBASIC-0.13□□□□□ -2.43
SNX4O95219 SNORD78.2-201ENST00000391076 69 ntBASIC-0.13□□□□□ -2.43
SNX4O95219 SNORD115-47-201ENST00000391226 86 ntBASIC-0.13□□□□□ -2.43
SNX4O95219 RNU6-510P-201ENST00000391239 108 ntBASIC-0.13□□□□□ -2.43
SNX4O95219 RNU2-59P-201ENST00000410482 191 ntBASIC-0.13□□□□□ -2.43
SNX4O95219 RNU7-102P-201ENST00000458948 62 ntBASIC-0.13□□□□□ -2.43
SNX4O95219 RPL7P42-201ENST00000481005 679 ntBASIC-0.13□□□□□ -2.43
SNX4O95219 RPL23AP54-201ENST00000495129 419 ntBASIC-0.13□□□□□ -2.43
SNX4O95219 AC245505.1-201ENST00000556398 224 ntBASIC-0.13□□□□□ -2.43
SNX4O95219 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-0.13□□□□□ -2.43
SNX4O95219 RNA5SP325-201ENST00000363756 130 ntBASIC-0.14□□□□□ -2.43
SNX4O95219 RNU6-99P-201ENST00000364721 107 ntBASIC-0.14□□□□□ -2.43
SNX4O95219 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.14□□□□□ -2.43
SNX4O95219 RNY3P4-201ENST00000384428 101 ntBASIC-0.14□□□□□ -2.43
SNX4O95219 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.14□□□□□ -2.43
SNX4O95219 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.14□□□□□ -2.43
SNX4O95219 AC024067.1-201ENST00000426199 223 ntBASIC-0.14□□□□□ -2.43
SNX4O95219 BTF3P11-201ENST00000426582 477 ntBASIC-0.14□□□□□ -2.43
SNX4O95219 SEPT7P4-201ENST00000437076 306 ntBASIC-0.14□□□□□ -2.43
SNX4O95219 AC107399.1-201ENST00000451226 265 ntBASIC-0.14□□□□□ -2.43
SNX4O95219 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.14□□□□□ -2.43
SNX4O95219 RPS29P25-201ENST00000481709 171 ntBASIC-0.14□□□□□ -2.43
SNX4O95219 AC024405.2-202ENST00000532731 184 ntBASIC-0.14□□□□□ -2.43
SNX4O95219 MIR3678-201ENST00000578455 94 ntBASIC-0.14□□□□□ -2.43
SNX4O95219 AC022441.3-201ENST00000605737 136 ntBASIC-0.14□□□□□ -2.43
SNX4O95219 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.15□□□□□ -2.43
SNX4O95219 MIR548F5-201ENST00000408421 86 ntBASIC-0.15□□□□□ -2.43
SNX4O95219 MTND1P29-201ENST00000448112 647 ntBASIC-0.15□□□□□ -2.43
SNX4O95219 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.15□□□□□ -2.43
SNX4O95219 RNU6-470P-201ENST00000515954 104 ntBASIC-0.15□□□□□ -2.43
SNX4O95219 AC127455.1-201ENST00000565496 145 ntBASIC-0.15□□□□□ -2.43
SNX4O95219 SNORD92-201ENST00000585078 85 ntBASIC-0.15□□□□□ -2.43
SNX4O95219 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.15□□□□□ -2.43
SNX4O95219 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-0.15□□□□□ -2.43
SNX4O95219 SNORA9.1-201ENST00000362412 131 ntBASIC-0.16□□□□□ -2.44
SNX4O95219 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.16□□□□□ -2.44
SNX4O95219 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.16□□□□□ -2.44
SNX4O95219 SNORD116-1-201ENST00000384335 95 ntBASIC-0.16□□□□□ -2.44
SNX4O95219 Y_RNA.559-201ENST00000384686 107 ntBASIC-0.16□□□□□ -2.44
SNX4O95219 SNORD38B-201ENST00000384690 67 ntBASIC-0.16□□□□□ -2.44
SNX4O95219 MIR1257-201ENST00000408490 117 ntBASIC-0.16□□□□□ -2.44
SNX4O95219 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.16□□□□□ -2.44
SNX4O95219 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.16□□□□□ -2.44
SNX4O95219 MTND1P2-201ENST00000430604 821 ntBASIC-0.16□□□□□ -2.44
SNX4O95219 MTND3P10-201ENST00000450967 341 ntBASIC-0.16□□□□□ -2.44
SNX4O95219 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.16□□□□□ -2.44
SNX4O95219 RPL23AP91-201ENST00000569211 455 ntBASIC-0.16□□□□□ -2.44
SNX4O95219 AC008608.1-201ENST00000603910 127 ntBASIC-0.16□□□□□ -2.44
SNX4O95219 AC104408.1-201ENST00000605241 170 ntBASIC-0.16□□□□□ -2.44
SNX4O95219 SNORD38B-202ENST00000625943 69 ntBASIC-0.16□□□□□ -2.44
SNX4O95219 SNORA72.1-201ENST00000363485 129 ntBASIC-0.17□□□□□ -2.44
SNX4O95219 RNU7-156P-201ENST00000517214 74 ntBASIC-0.17□□□□□ -2.44
SNX4O95219 AC144568.1-201ENST00000520139 137 ntBASIC-0.17□□□□□ -2.44
SNX4O95219 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.17□□□□□ -2.44
SNX4O95219 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.17□□□□□ -2.44
SNX4O95219 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-0.17□□□□□ -2.44
SNX4O95219 AC134878.1-201ENST00000619901 243 ntBASIC-0.17□□□□□ -2.44
SNX4O95219 AC067863.3-201ENST00000624172 122 ntBASIC-0.17□□□□□ -2.44
SNX4O95219 AC010332.2-201ENST00000613083 1904 ntBASIC-0.18□□□□□ -2.44
SNX4O95219 RNA5SP257-201ENST00000363023 116 ntBASIC-0.18□□□□□ -2.44
SNX4O95219 Y_RNA.295-201ENST00000364918 102 ntBASIC-0.18□□□□□ -2.44
SNX4O95219 Y_RNA.404-201ENST00000383978 102 ntBASIC-0.18□□□□□ -2.44
SNX4O95219 SNORA24-201ENST00000384096 131 ntBASIC-0.18□□□□□ -2.44
SNX4O95219 AC236972.2-201ENST00000434979 310 ntBASIC-0.18□□□□□ -2.44
SNX4O95219 RNU7-185P-201ENST00000459215 60 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms