Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 MRPL35P3-201ENST00000421557 364 ntBASIC1.07□□□□□ -2.24
BEST1O76090 RNU7-41P-201ENST00000515917 61 ntBASIC1.07□□□□□ -2.24
BEST1O76090 Y_RNA.711-201ENST00000516993 102 ntBASIC1.07□□□□□ -2.24
BEST1O76090 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.07□□□□□ -2.24
BEST1O76090 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
BEST1O76090 MIR103A2-201ENST00000362154 78 ntBASIC1.06□□□□□ -2.24
BEST1O76090 RNU4-38P-201ENST00000364472 129 ntBASIC1.06□□□□□ -2.24
BEST1O76090 Y_RNA.276-201ENST00000364732 109 ntBASIC1.06□□□□□ -2.24
BEST1O76090 SNORA22B-201ENST00000383876 138 ntBASIC1.06□□□□□ -2.24
BEST1O76090 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
BEST1O76090 MTCO2P33-201ENST00000402100 465 ntBASIC1.06□□□□□ -2.24
BEST1O76090 MTCO2P12-201ENST00000427426 682 ntBASIC1.06□□□□□ -2.24
BEST1O76090 SNRPGP14-201ENST00000435400 219 ntBASIC1.06□□□□□ -2.24
BEST1O76090 AL512605.2-201ENST00000592972 256 ntBASIC1.06□□□□□ -2.24
BEST1O76090 AL355297.3-201ENST00000604082 446 ntBASIC1.06□□□□□ -2.24
BEST1O76090 Pinc.1-201ENST00000616452 154 ntBASIC1.06□□□□□ -2.24
BEST1O76090 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.06□□□□□ -2.24
BEST1O76090 Y_RNA.152-201ENST00000363578 100 ntBASIC1.05□□□□□ -2.24
BEST1O76090 RNU6-770P-201ENST00000363929 105 ntBASIC1.05□□□□□ -2.24
BEST1O76090 RNU1-93P-201ENST00000364704 169 ntBASIC1.05□□□□□ -2.24
BEST1O76090 RNU6-290P-201ENST00000365212 101 ntBASIC1.05□□□□□ -2.24
BEST1O76090 SNORD114-22-201ENST00000365423 72 ntBASIC1.05□□□□□ -2.24
BEST1O76090 Y_RNA.455-201ENST00000384230 98 ntBASIC1.05□□□□□ -2.24
BEST1O76090 MTCO1P5-201ENST00000433573 344 ntBASIC1.05□□□□□ -2.24
BEST1O76090 AC023449.1-201ENST00000454464 154 ntBASIC1.05□□□□□ -2.24
BEST1O76090 RNU6-1143P-201ENST00000516125 104 ntBASIC1.05□□□□□ -2.24
BEST1O76090 AC136443.5-201ENST00000603741 370 ntBASIC1.05□□□□□ -2.24
BEST1O76090 AC037487.3-201ENST00000606668 112 ntBASIC1.05□□□□□ -2.24
BEST1O76090 MIR6504-201ENST00000613520 61 ntBASIC1.05□□□□□ -2.24
BEST1O76090 SEPT14P17-201ENST00000617978 177 ntBASIC1.05□□□□□ -2.24
BEST1O76090 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
BEST1O76090 AC134026.1-201ENST00000623249 2239 ntBASIC1.04□□□□□ -2.24
BEST1O76090 RNU6-1205P-201ENST00000363625 106 ntBASIC1.04□□□□□ -2.24
BEST1O76090 RNU6-268P-201ENST00000364174 107 ntBASIC1.04□□□□□ -2.24
BEST1O76090 Y_RNA.226-201ENST00000364337 114 ntBASIC1.04□□□□□ -2.24
BEST1O76090 SNORA25.9-201ENST00000365087 128 ntBASIC1.04□□□□□ -2.24
BEST1O76090 Y_RNA.394-201ENST00000383942 103 ntBASIC1.04□□□□□ -2.24
BEST1O76090 RNU6-1067P-201ENST00000384752 107 ntBASIC1.04□□□□□ -2.24
BEST1O76090 RNU6-763P-201ENST00000390865 106 ntBASIC1.04□□□□□ -2.24
BEST1O76090 SNORA53-201ENST00000391141 249 ntBASIC1.04□□□□□ -2.24
BEST1O76090 MIR1278-201ENST00000408753 81 ntBASIC1.04□□□□□ -2.24
BEST1O76090 SNORD11-201ENST00000459124 84 ntBASIC1.04□□□□□ -2.24
BEST1O76090 SNORD124-201ENST00000459577 104 ntBASIC1.04□□□□□ -2.24
BEST1O76090 RNU11-2P-201ENST00000516898 142 ntBASIC1.04□□□□□ -2.24
BEST1O76090 RNU2-31P-201ENST00000516954 155 ntBASIC1.04□□□□□ -2.24
BEST1O76090 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
BEST1O76090 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
BEST1O76090 RNU6-797P-201ENST00000363101 109 ntBASIC1.03□□□□□ -2.24
BEST1O76090 Y_RNA.138-201ENST00000363462 102 ntBASIC1.03□□□□□ -2.24
BEST1O76090 RNU6-326P-201ENST00000365480 107 ntBASIC1.03□□□□□ -2.24
BEST1O76090 Y_RNA.370-201ENST00000365589 108 ntBASIC1.03□□□□□ -2.24
BEST1O76090 Y_RNA.604-201ENST00000410574 102 ntBASIC1.03□□□□□ -2.24
BEST1O76090 RPS29P28-201ENST00000446439 141 ntBASIC1.03□□□□□ -2.24
BEST1O76090 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.03□□□□□ -2.24
BEST1O76090 MIR548AR-201ENST00000582191 57 ntBASIC1.03□□□□□ -2.24
BEST1O76090 MIR3171-201ENST00000584270 74 ntBASIC1.03□□□□□ -2.24
BEST1O76090 AC006441.5-201ENST00000612680 209 ntBASIC1.03□□□□□ -2.24
BEST1O76090 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
BEST1O76090 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
BEST1O76090 MIR373-201ENST00000362273 69 ntBASIC1.02□□□□□ -2.25
BEST1O76090 Y_RNA.202-201ENST00000364083 110 ntBASIC1.02□□□□□ -2.25
BEST1O76090 Y_RNA.214-201ENST00000364201 112 ntBASIC1.02□□□□□ -2.25
BEST1O76090 MIR1185-1-201ENST00000408598 86 ntBASIC1.02□□□□□ -2.25
BEST1O76090 RNU6-121P-201ENST00000410525 99 ntBASIC1.02□□□□□ -2.25
BEST1O76090 POLR2J4-204ENST00000418424 324 ntBASIC1.02□□□□□ -2.25
BEST1O76090 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.02□□□□□ -2.25
BEST1O76090 MRPS35P2-201ENST00000508242 191 ntBASIC1.02□□□□□ -2.25
BEST1O76090 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.02□□□□□ -2.25
BEST1O76090 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.02□□□□□ -2.25
BEST1O76090 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.02□□□□□ -2.25
BEST1O76090 AC013791.1-201ENST00000616619 62 ntBASIC1.02□□□□□ -2.25
BEST1O76090 AC008133.2-201ENST00000624540 351 ntBASIC1.02□□□□□ -2.25
BEST1O76090 SNORA25.1-201ENST00000362326 128 ntBASIC1.01□□□□□ -2.25
BEST1O76090 Y_RNA.19-201ENST00000362462 99 ntBASIC1.01□□□□□ -2.25
BEST1O76090 Y_RNA.105-201ENST00000363182 111 ntBASIC1.01□□□□□ -2.25
BEST1O76090 SNORA25.3-201ENST00000363205 127 ntBASIC1.01□□□□□ -2.25
BEST1O76090 Y_RNA.330-201ENST00000365230 109 ntBASIC1.01□□□□□ -2.25
BEST1O76090 RNU6-514P-201ENST00000384208 107 ntBASIC1.01□□□□□ -2.25
BEST1O76090 MIR499A-201ENST00000384903 122 ntBASIC1.01□□□□□ -2.25
BEST1O76090 RNA5SP496-201ENST00000391240 109 ntBASIC1.01□□□□□ -2.25
BEST1O76090 U8.17-201ENST00000391292 132 ntBASIC1.01□□□□□ -2.25
BEST1O76090 ELOCP20-201ENST00000422460 345 ntBASIC1.01□□□□□ -2.25
BEST1O76090 FABP5P4-201ENST00000437203 171 ntBASIC1.01□□□□□ -2.25
BEST1O76090 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.01□□□□□ -2.25
BEST1O76090 Y_RNA.637-201ENST00000459424 114 ntBASIC1.01□□□□□ -2.25
BEST1O76090 PDCD5P2-201ENST00000507570 312 ntBASIC1.01□□□□□ -2.25
BEST1O76090 RN7SKP164-201ENST00000516138 266 ntBASIC1.01□□□□□ -2.25
BEST1O76090 RNY3P15-201ENST00000516297 97 ntBASIC1.01□□□□□ -2.25
BEST1O76090 AC131281.1-201ENST00000522984 164 ntBASIC1.01□□□□□ -2.25
BEST1O76090 MIR3973-201ENST00000579824 107 ntBASIC1.01□□□□□ -2.25
BEST1O76090 AC113195.1-201ENST00000579952 141 ntBASIC1.01□□□□□ -2.25
BEST1O76090 AL020996.3-201ENST00000606617 222 ntBASIC1.01□□□□□ -2.25
BEST1O76090 MIR4251-201ENST00000635819 61 ntBASIC1.01□□□□□ -2.25
BEST1O76090 RNU1-36P-201ENST00000365130 165 ntBASIC1□□□□□ -2.25
BEST1O76090 SNORA1.2-201ENST00000365189 134 ntBASIC1□□□□□ -2.25
BEST1O76090 SNORD72-201ENST00000390994 80 ntBASIC1□□□□□ -2.25
BEST1O76090 MIR942-201ENST00000401111 86 ntBASIC1□□□□□ -2.25
BEST1O76090 AL603910.2-201ENST00000407268 136 ntBASIC1□□□□□ -2.25
BEST1O76090 RNA5SP247-201ENST00000411181 105 ntBASIC1□□□□□ -2.25
BEST1O76090 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms