Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 FCF1P9-201ENST00000412546 282 ntBASIC0.35□□□□□ -2.35
CLPXO76031 MTCO2P12-201ENST00000427426 682 ntBASIC0.35□□□□□ -2.35
CLPXO76031 SNRPGP14-201ENST00000435400 219 ntBASIC0.35□□□□□ -2.35
CLPXO76031 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.35□□□□□ -2.35
CLPXO76031 SNORA68.3-201ENST00000515906 83 ntBASIC0.35□□□□□ -2.35
CLPXO76031 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.35□□□□□ -2.35
CLPXO76031 AC084782.3-201ENST00000612282 578 ntBASIC0.35□□□□□ -2.35
CLPXO76031 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
CLPXO76031 AC090625.1-201ENST00000357130 210 ntBASIC0.34□□□□□ -2.36
CLPXO76031 Y_RNA.279-201ENST00000364763 95 ntBASIC0.34□□□□□ -2.36
CLPXO76031 Y_RNA.310-201ENST00000365063 113 ntBASIC0.34□□□□□ -2.36
CLPXO76031 Y_RNA.314-201ENST00000365114 102 ntBASIC0.34□□□□□ -2.36
CLPXO76031 SNORA1.2-201ENST00000365189 134 ntBASIC0.34□□□□□ -2.36
CLPXO76031 RNU4-45P-201ENST00000365469 141 ntBASIC0.34□□□□□ -2.36
CLPXO76031 Y_RNA.537-201ENST00000384626 109 ntBASIC0.34□□□□□ -2.36
CLPXO76031 MIR573-201ENST00000384964 99 ntBASIC0.34□□□□□ -2.36
CLPXO76031 U8.17-201ENST00000391292 132 ntBASIC0.34□□□□□ -2.36
CLPXO76031 RPL23AP54-201ENST00000495129 419 ntBASIC0.34□□□□□ -2.36
CLPXO76031 SCARNA8-201ENST00000515924 131 ntBASIC0.34□□□□□ -2.36
CLPXO76031 RNU6-1007P-201ENST00000516586 107 ntBASIC0.34□□□□□ -2.36
CLPXO76031 AC024405.2-202ENST00000532731 184 ntBASIC0.34□□□□□ -2.36
CLPXO76031 AC127455.1-201ENST00000565496 145 ntBASIC0.34□□□□□ -2.36
CLPXO76031 MIR2681-201ENST00000581814 105 ntBASIC0.34□□□□□ -2.36
CLPXO76031 U6.92-201ENST00000636464 89 ntBASIC0.34□□□□□ -2.36
CLPXO76031 TPTEP1-208ENST00000636884 213 ntBASIC0.34□□□□□ -2.36
CLPXO76031 RNU6-716P-201ENST00000365621 103 ntBASIC0.33□□□□□ -2.36
CLPXO76031 Y_RNA.599-201ENST00000410489 109 ntBASIC0.33□□□□□ -2.36
CLPXO76031 RNA5SP127-201ENST00000411051 133 ntBASIC0.33□□□□□ -2.36
CLPXO76031 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.33□□□□□ -2.36
CLPXO76031 Y_RNA.653-201ENST00000459091 95 ntBASIC0.33□□□□□ -2.36
CLPXO76031 Y_RNA.655-201ENST00000515919 96 ntBASIC0.33□□□□□ -2.36
CLPXO76031 RNU4-57P-201ENST00000515980 135 ntBASIC0.33□□□□□ -2.36
CLPXO76031 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.33□□□□□ -2.36
CLPXO76031 AC025253.1-201ENST00000613623 543 ntBASIC0.33□□□□□ -2.36
CLPXO76031 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.33□□□□□ -2.36
CLPXO76031 Y_RNA.160-201ENST00000363677 92 ntBASIC0.32□□□□□ -2.36
CLPXO76031 Y_RNA.251-201ENST00000364551 99 ntBASIC0.32□□□□□ -2.36
CLPXO76031 MIR1197-201ENST00000408818 88 ntBASIC0.32□□□□□ -2.36
CLPXO76031 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.32□□□□□ -2.36
CLPXO76031 FGF7P6-202ENST00000451282 293 ntBASIC0.32□□□□□ -2.36
CLPXO76031 snoU13.21-201ENST00000459368 105 ntBASIC0.32□□□□□ -2.36
CLPXO76031 HMGN1P10-201ENST00000474557 553 ntBASIC0.32□□□□□ -2.36
CLPXO76031 NDUFA4P2-201ENST00000489989 244 ntBASIC0.32□□□□□ -2.36
CLPXO76031 RNU7-115P-201ENST00000516433 55 ntBASIC0.32□□□□□ -2.36
CLPXO76031 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
CLPXO76031 MIR548AO-201ENST00000579992 96 ntBASIC0.32□□□□□ -2.36
CLPXO76031 AP000753.3-201ENST00000604083 169 ntBASIC0.32□□□□□ -2.36
CLPXO76031 AC093783.1-201ENST00000612976 329 ntBASIC0.32□□□□□ -2.36
CLPXO76031 MIR548AY-201ENST00000617669 107 ntBASIC0.32□□□□□ -2.36
CLPXO76031 RNU6-490P-201ENST00000362985 107 ntBASIC0.31□□□□□ -2.36
CLPXO76031 RNU6-1209P-201ENST00000363655 107 ntBASIC0.31□□□□□ -2.36
CLPXO76031 SNORD45.3-201ENST00000363836 72 ntBASIC0.31□□□□□ -2.36
CLPXO76031 RNU6-268P-201ENST00000364174 107 ntBASIC0.31□□□□□ -2.36
CLPXO76031 Y_RNA.331-201ENST00000365267 102 ntBASIC0.31□□□□□ -2.36
CLPXO76031 RNU6-708P-201ENST00000384217 107 ntBASIC0.31□□□□□ -2.36
CLPXO76031 MTCO2P33-201ENST00000402100 465 ntBASIC0.31□□□□□ -2.36
CLPXO76031 AL590004.1-201ENST00000405321 300 ntBASIC0.31□□□□□ -2.36
CLPXO76031 AC091951.2-201ENST00000500762 203 ntBASIC0.31□□□□□ -2.36
CLPXO76031 MIR4423-201ENST00000580922 80 ntBASIC0.31□□□□□ -2.36
CLPXO76031 AC008507.4-201ENST00000585464 127 ntBASIC0.31□□□□□ -2.36
CLPXO76031 VN1R91P-201ENST00000594377 169 ntBASIC0.31□□□□□ -2.36
CLPXO76031 AC015726.2-201ENST00000620112 122 ntBASIC0.31□□□□□ -2.36
CLPXO76031 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.3□□□□□ -2.36
CLPXO76031 MIRLET7D-201ENST00000362263 87 ntBASIC0.3□□□□□ -2.36
CLPXO76031 RNA5SP257-201ENST00000363023 116 ntBASIC0.3□□□□□ -2.36
CLPXO76031 RNU4-40P-201ENST00000364351 143 ntBASIC0.3□□□□□ -2.36
CLPXO76031 RNU6-580P-201ENST00000365159 107 ntBASIC0.3□□□□□ -2.36
CLPXO76031 RNU6-847P-201ENST00000411115 108 ntBASIC0.3□□□□□ -2.36
CLPXO76031 PDCL2P1-201ENST00000419302 352 ntBASIC0.3□□□□□ -2.36
CLPXO76031 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.3□□□□□ -2.36
CLPXO76031 Y_RNA.681-201ENST00000516445 113 ntBASIC0.3□□□□□ -2.36
CLPXO76031 SNORA62.5-201ENST00000516634 120 ntBASIC0.3□□□□□ -2.36
CLPXO76031 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.3□□□□□ -2.36
CLPXO76031 AL080274.1-201ENST00000605565 220 ntBASIC0.3□□□□□ -2.36
CLPXO76031 MIR4791-201ENST00000607666 84 ntBASIC0.3□□□□□ -2.36
CLPXO76031 AC138305.3-201ENST00000624988 240 ntBASIC0.3□□□□□ -2.36
CLPXO76031 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.3□□□□□ -2.36
CLPXO76031 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.29□□□□□ -2.36
CLPXO76031 Y_RNA.462-201ENST00000384268 102 ntBASIC0.29□□□□□ -2.36
CLPXO76031 MIR520F-201ENST00000384824 87 ntBASIC0.29□□□□□ -2.36
CLPXO76031 MIR520H-201ENST00000385126 88 ntBASIC0.29□□□□□ -2.36
CLPXO76031 AF228730.4-201ENST00000421457 183 ntBASIC0.29□□□□□ -2.36
CLPXO76031 RNU6-977P-201ENST00000516411 103 ntBASIC0.29□□□□□ -2.36
CLPXO76031 RNU7-181P-201ENST00000517234 74 ntBASIC0.29□□□□□ -2.36
CLPXO76031 MIR4264-201ENST00000583520 66 ntBASIC0.29□□□□□ -2.36
CLPXO76031 AC113139.1-201ENST00000605049 239 ntBASIC0.29□□□□□ -2.36
CLPXO76031 AC022306.2-201ENST00000617563 647 ntBASIC0.29□□□□□ -2.36
CLPXO76031 MTND1P7-201ENST00000632801 297 ntBASIC0.29□□□□□ -2.36
CLPXO76031 MIR18A-201ENST00000362310 71 ntBASIC0.28□□□□□ -2.36
CLPXO76031 RNU2-70P-201ENST00000410718 179 ntBASIC0.28□□□□□ -2.36
CLPXO76031 MTCO3P10-201ENST00000455912 772 ntBASIC0.28□□□□□ -2.36
CLPXO76031 RNU6-437P-201ENST00000459408 95 ntBASIC0.28□□□□□ -2.36
CLPXO76031 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
CLPXO76031 RNU6-559P-201ENST00000516151 98 ntBASIC0.28□□□□□ -2.36
CLPXO76031 AC006600.1-201ENST00000572529 153 ntBASIC0.28□□□□□ -2.36
CLPXO76031 DEFB117-201ENST00000602356 141 ntBASIC0.28□□□□□ -2.36
CLPXO76031 AC023932.2-201ENST00000603176 175 ntBASIC0.28□□□□□ -2.36
CLPXO76031 Y_RNA.772-201ENST00000606692 102 ntBASIC0.28□□□□□ -2.36
CLPXO76031 AC006441.5-201ENST00000612680 209 ntBASIC0.28□□□□□ -2.36
CLPXO76031 uc_338.4-201ENST00000616635 176 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms