Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 SNORA4.2-201ENST00000365313 147 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 Y_RNA.357-201ENST00000365487 109 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 RNU6-746P-201ENST00000384112 109 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 RNU6-804P-201ENST00000384286 107 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 RN7SKP200-201ENST00000410564 320 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.03□□□□□ -2.08
VPS4BO75351 AL158823.1-201ENST00000418441 478 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 RNA5SP233-201ENST00000459153 113 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.03□□□□□ -2.08
VPS4BO75351 RNU6-1299P-201ENST00000516316 100 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 RNU6-197P-201ENST00000516680 100 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 RNA5SP481-201ENST00000516814 122 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 Y_RNA.714-201ENST00000517065 90 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.03□□□□□ -2.08
VPS4BO75351 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 AL442644.1-201ENST00000454390 3105 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.03□□□□□ -2.09
VPS4BO75351 AC008555.8-201ENST00000623602 2168 ntBASIC2.02□□□□□ -2.09
VPS4BO75351 AC131280.1-202ENST00000624067 4211 ntBASIC2.02□□□□□ -2.09
VPS4BO75351 RNA5SP160-201ENST00000364866 120 ntBASIC2.02□□□□□ -2.09
VPS4BO75351 Y_RNA.432-201ENST00000384087 111 ntBASIC2.02□□□□□ -2.09
VPS4BO75351 SNORA67.3-201ENST00000384366 140 ntBASIC2.02□□□□□ -2.09
VPS4BO75351 Y_RNA.506-201ENST00000384494 102 ntBASIC2.02□□□□□ -2.09
VPS4BO75351 RNU6-1031P-201ENST00000384773 107 ntBASIC2.02□□□□□ -2.09
VPS4BO75351 RNU6-131P-201ENST00000391144 107 ntBASIC2.02□□□□□ -2.09
VPS4BO75351 AC019129.1-201ENST00000403786 261 ntBASIC2.02□□□□□ -2.09
VPS4BO75351 Y_RNA.622-201ENST00000411091 108 ntBASIC2.02□□□□□ -2.09
VPS4BO75351 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.02□□□□□ -2.09
VPS4BO75351 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.02□□□□□ -2.09
VPS4BO75351 AC107027.2-201ENST00000512197 115 ntBASIC2.02□□□□□ -2.09
VPS4BO75351 MIR4498-201ENST00000577599 66 ntBASIC2.02□□□□□ -2.09
VPS4BO75351 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
VPS4BO75351 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.01□□□□□ -2.09
VPS4BO75351 Y_RNA.242-201ENST00000364473 110 ntBASIC2.01□□□□□ -2.09
VPS4BO75351 Y_RNA.265-201ENST00000364677 108 ntBASIC2.01□□□□□ -2.09
VPS4BO75351 STAG3L5P-204ENST00000443759 179 ntBASIC2.01□□□□□ -2.09
VPS4BO75351 MRPS17P9-201ENST00000511924 393 ntBASIC2.01□□□□□ -2.09
VPS4BO75351 RNU7-200P-201ENST00000516105 62 ntBASIC2.01□□□□□ -2.09
VPS4BO75351 MIR4781-201ENST00000585250 76 ntBASIC2.01□□□□□ -2.09
VPS4BO75351 AC104465.1-201ENST00000611365 139 ntBASIC2.01□□□□□ -2.09
VPS4BO75351 Pinc.1-201ENST00000616452 154 ntBASIC2.01□□□□□ -2.09
VPS4BO75351 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.01□□□□□ -2.09
VPS4BO75351 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
VPS4BO75351 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2□□□□□ -2.09
VPS4BO75351 MIR337-201ENST00000362281 93 ntBASIC2□□□□□ -2.09
VPS4BO75351 RNU1-17P-201ENST00000363022 152 ntBASIC2□□□□□ -2.09
VPS4BO75351 Y_RNA.634-201ENST00000364811 113 ntBASIC2□□□□□ -2.09
VPS4BO75351 SNORD50B-201ENST00000364995 70 ntBASIC2□□□□□ -2.09
VPS4BO75351 Y_RNA.398-201ENST00000383952 99 ntBASIC2□□□□□ -2.09
VPS4BO75351 Y_RNA.486-201ENST00000384398 107 ntBASIC2□□□□□ -2.09
VPS4BO75351 MIR583-201ENST00000384846 75 ntBASIC2□□□□□ -2.09
VPS4BO75351 SNORD72-201ENST00000390994 80 ntBASIC2□□□□□ -2.09
VPS4BO75351 RNA5SP212-201ENST00000391223 107 ntBASIC2□□□□□ -2.09
VPS4BO75351 AL034345.1-201ENST00000407768 123 ntBASIC2□□□□□ -2.09
VPS4BO75351 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2□□□□□ -2.09
VPS4BO75351 SNRPGP14-201ENST00000435400 219 ntBASIC2□□□□□ -2.09
VPS4BO75351 MTND5P41-201ENST00000517498 206 ntBASIC2□□□□□ -2.09
VPS4BO75351 MIR3935-201ENST00000583472 104 ntBASIC2□□□□□ -2.09
VPS4BO75351 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2□□□□□ -2.09
VPS4BO75351 AC027279.3-201ENST00000625055 122 ntBASIC2□□□□□ -2.09
VPS4BO75351 ZNF702P-202ENST00000434269 1966 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VPS4BO75351 SNORD68-201ENST00000363214 84 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 RNU6-978P-201ENST00000364371 103 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 Y_RNA.337-201ENST00000365312 102 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 RNU6-1130P-201ENST00000365434 107 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 RNU6-424P-201ENST00000384367 105 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 RNU6-125P-201ENST00000384505 107 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 U8.13-201ENST00000390842 128 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 RNU6-360P-201ENST00000390944 104 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 SNORA26-201ENST00000391286 122 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 RNA5SP338-201ENST00000410495 85 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 RPL30P13-201ENST00000418873 348 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 snoU13.27-201ENST00000459278 104 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 AC099513.1-201ENST00000490423 301 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 SNORA31.17-201ENST00000516953 127 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 AC022254.1-201ENST00000567857 235 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 MIR378D2-201ENST00000580636 98 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
VPS4BO75351 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
VPS4BO75351 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
VPS4BO75351 Y_RNA.66-201ENST00000362862 102 ntBASIC1.98□□□□□ -2.09
VPS4BO75351 Y_RNA.91-201ENST00000363042 107 ntBASIC1.98□□□□□ -2.09
VPS4BO75351 RNU6-597P-201ENST00000365620 102 ntBASIC1.98□□□□□ -2.09
VPS4BO75351 RNU6-449P-201ENST00000383914 107 ntBASIC1.98□□□□□ -2.09
VPS4BO75351 MIR548M-201ENST00000408260 86 ntBASIC1.98□□□□□ -2.09
VPS4BO75351 SNORA79-201ENST00000408376 140 ntBASIC1.98□□□□□ -2.09
VPS4BO75351 RNU2-7P-201ENST00000410794 178 ntBASIC1.98□□□□□ -2.09
VPS4BO75351 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.98□□□□□ -2.09
VPS4BO75351 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.98□□□□□ -2.09
VPS4BO75351 AC006441.5-201ENST00000612680 209 ntBASIC1.98□□□□□ -2.09
VPS4BO75351 MTND1P7-201ENST00000632801 297 ntBASIC1.98□□□□□ -2.09
VPS4BO75351 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
VPS4BO75351 Y_RNA.118-201ENST00000363300 101 ntBASIC1.97□□□□□ -2.09
VPS4BO75351 Y_RNA.336-201ENST00000365307 109 ntBASIC1.97□□□□□ -2.09
VPS4BO75351 AC006461.1-201ENST00000412637 326 ntBASIC1.97□□□□□ -2.09
VPS4BO75351 MLLT10P1-201ENST00000418346 262 ntBASIC1.97□□□□□ -2.09
VPS4BO75351 AL392103.1-201ENST00000447000 198 ntBASIC1.97□□□□□ -2.09
VPS4BO75351 SNORD45.4-201ENST00000516629 73 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 205.9 ms