Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 SNORA4.2-201ENST00000365313 147 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 Y_RNA.357-201ENST00000365487 109 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 RNU6-746P-201ENST00000384112 109 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 RNU6-804P-201ENST00000384286 107 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 RN7SKP200-201ENST00000410564 320 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.03□□□□□ -2.08
VPS4BO75351 AL158823.1-201ENST00000418441 478 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 RNA5SP233-201ENST00000459153 113 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.03□□□□□ -2.08
VPS4BO75351 RNU6-1299P-201ENST00000516316 100 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 RNU6-197P-201ENST00000516680 100 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 RNA5SP481-201ENST00000516814 122 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 Y_RNA.714-201ENST00000517065 90 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.03□□□□□ -2.08
VPS4BO75351 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 AL442644.1-201ENST00000454390 3105 ntBASIC2.03□□□□□ -2.08
VPS4BO75351 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.03□□□□□ -2.09
VPS4BO75351 AC008555.8-201ENST00000623602 2168 ntBASIC2.02□□□□□ -2.09
VPS4BO75351 AC131280.1-202ENST00000624067 4211 ntBASIC2.02□□□□□ -2.09
VPS4BO75351 RNA5SP160-201ENST00000364866 120 ntBASIC2.02□□□□□ -2.09
VPS4BO75351 Y_RNA.432-201ENST00000384087 111 ntBASIC2.02□□□□□ -2.09
VPS4BO75351 SNORA67.3-201ENST00000384366 140 ntBASIC2.02□□□□□ -2.09
VPS4BO75351 Y_RNA.506-201ENST00000384494 102 ntBASIC2.02□□□□□ -2.09
VPS4BO75351 RNU6-1031P-201ENST00000384773 107 ntBASIC2.02□□□□□ -2.09
VPS4BO75351 RNU6-131P-201ENST00000391144 107 ntBASIC2.02□□□□□ -2.09
VPS4BO75351 AC019129.1-201ENST00000403786 261 ntBASIC2.02□□□□□ -2.09
VPS4BO75351 Y_RNA.622-201ENST00000411091 108 ntBASIC2.02□□□□□ -2.09
VPS4BO75351 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.02□□□□□ -2.09
VPS4BO75351 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.02□□□□□ -2.09
VPS4BO75351 AC107027.2-201ENST00000512197 115 ntBASIC2.02□□□□□ -2.09
VPS4BO75351 MIR4498-201ENST00000577599 66 ntBASIC2.02□□□□□ -2.09
VPS4BO75351 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
VPS4BO75351 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.01□□□□□ -2.09
VPS4BO75351 Y_RNA.242-201ENST00000364473 110 ntBASIC2.01□□□□□ -2.09
VPS4BO75351 Y_RNA.265-201ENST00000364677 108 ntBASIC2.01□□□□□ -2.09
VPS4BO75351 STAG3L5P-204ENST00000443759 179 ntBASIC2.01□□□□□ -2.09
VPS4BO75351 MRPS17P9-201ENST00000511924 393 ntBASIC2.01□□□□□ -2.09
VPS4BO75351 RNU7-200P-201ENST00000516105 62 ntBASIC2.01□□□□□ -2.09
VPS4BO75351 MIR4781-201ENST00000585250 76 ntBASIC2.01□□□□□ -2.09
VPS4BO75351 AC104465.1-201ENST00000611365 139 ntBASIC2.01□□□□□ -2.09
VPS4BO75351 Pinc.1-201ENST00000616452 154 ntBASIC2.01□□□□□ -2.09
VPS4BO75351 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.01□□□□□ -2.09
VPS4BO75351 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
VPS4BO75351 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2□□□□□ -2.09
VPS4BO75351 MIR337-201ENST00000362281 93 ntBASIC2□□□□□ -2.09
VPS4BO75351 RNU1-17P-201ENST00000363022 152 ntBASIC2□□□□□ -2.09
VPS4BO75351 Y_RNA.634-201ENST00000364811 113 ntBASIC2□□□□□ -2.09
VPS4BO75351 SNORD50B-201ENST00000364995 70 ntBASIC2□□□□□ -2.09
VPS4BO75351 Y_RNA.398-201ENST00000383952 99 ntBASIC2□□□□□ -2.09
VPS4BO75351 Y_RNA.486-201ENST00000384398 107 ntBASIC2□□□□□ -2.09
VPS4BO75351 MIR583-201ENST00000384846 75 ntBASIC2□□□□□ -2.09
VPS4BO75351 SNORD72-201ENST00000390994 80 ntBASIC2□□□□□ -2.09
VPS4BO75351 RNA5SP212-201ENST00000391223 107 ntBASIC2□□□□□ -2.09
VPS4BO75351 AL034345.1-201ENST00000407768 123 ntBASIC2□□□□□ -2.09
VPS4BO75351 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2□□□□□ -2.09
VPS4BO75351 SNRPGP14-201ENST00000435400 219 ntBASIC2□□□□□ -2.09
VPS4BO75351 MTND5P41-201ENST00000517498 206 ntBASIC2□□□□□ -2.09
VPS4BO75351 MIR3935-201ENST00000583472 104 ntBASIC2□□□□□ -2.09
VPS4BO75351 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2□□□□□ -2.09
VPS4BO75351 AC027279.3-201ENST00000625055 122 ntBASIC2□□□□□ -2.09
VPS4BO75351 ZNF702P-202ENST00000434269 1966 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VPS4BO75351 SNORD68-201ENST00000363214 84 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 RNU6-978P-201ENST00000364371 103 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 Y_RNA.337-201ENST00000365312 102 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 RNU6-1130P-201ENST00000365434 107 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 RNU6-424P-201ENST00000384367 105 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 RNU6-125P-201ENST00000384505 107 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 U8.13-201ENST00000390842 128 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 RNU6-360P-201ENST00000390944 104 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 SNORA26-201ENST00000391286 122 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 RNA5SP338-201ENST00000410495 85 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 RPL30P13-201ENST00000418873 348 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 snoU13.27-201ENST00000459278 104 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 AC099513.1-201ENST00000490423 301 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 SNORA31.17-201ENST00000516953 127 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 AC022254.1-201ENST00000567857 235 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 MIR378D2-201ENST00000580636 98 ntBASIC1.99□□□□□ -2.09
VPS4BO75351 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
VPS4BO75351 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
VPS4BO75351 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
VPS4BO75351 Y_RNA.66-201ENST00000362862 102 ntBASIC1.98□□□□□ -2.09
VPS4BO75351 Y_RNA.91-201ENST00000363042 107 ntBASIC1.98□□□□□ -2.09
VPS4BO75351 RNU6-597P-201ENST00000365620 102 ntBASIC1.98□□□□□ -2.09
VPS4BO75351 RNU6-449P-201ENST00000383914 107 ntBASIC1.98□□□□□ -2.09
VPS4BO75351 MIR548M-201ENST00000408260 86 ntBASIC1.98□□□□□ -2.09
VPS4BO75351 SNORA79-201ENST00000408376 140 ntBASIC1.98□□□□□ -2.09
VPS4BO75351 RNU2-7P-201ENST00000410794 178 ntBASIC1.98□□□□□ -2.09
VPS4BO75351 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.98□□□□□ -2.09
VPS4BO75351 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.98□□□□□ -2.09
VPS4BO75351 AC006441.5-201ENST00000612680 209 ntBASIC1.98□□□□□ -2.09
VPS4BO75351 MTND1P7-201ENST00000632801 297 ntBASIC1.98□□□□□ -2.09
VPS4BO75351 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
VPS4BO75351 Y_RNA.118-201ENST00000363300 101 ntBASIC1.97□□□□□ -2.09
VPS4BO75351 Y_RNA.336-201ENST00000365307 109 ntBASIC1.97□□□□□ -2.09
VPS4BO75351 AC006461.1-201ENST00000412637 326 ntBASIC1.97□□□□□ -2.09
VPS4BO75351 MLLT10P1-201ENST00000418346 262 ntBASIC1.97□□□□□ -2.09
VPS4BO75351 AL392103.1-201ENST00000447000 198 ntBASIC1.97□□□□□ -2.09
VPS4BO75351 SNORD45.4-201ENST00000516629 73 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 180.2 ms