Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 SNORA51.10-201ENST00000384418 136 ntBASIC0.19□□□□□ -2.38
NPHP4O75161 RNU6-510P-201ENST00000391239 108 ntBASIC0.19□□□□□ -2.38
NPHP4O75161 MTCO2P33-201ENST00000402100 465 ntBASIC0.19□□□□□ -2.38
NPHP4O75161 Y_RNA.592-201ENST00000410274 109 ntBASIC0.19□□□□□ -2.38
NPHP4O75161 RNU6-855P-201ENST00000410395 104 ntBASIC0.19□□□□□ -2.38
NPHP4O75161 MTND3P8-201ENST00000412909 339 ntBASIC0.19□□□□□ -2.38
NPHP4O75161 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.19□□□□□ -2.38
NPHP4O75161 RNU6-470P-201ENST00000515954 104 ntBASIC0.19□□□□□ -2.38
NPHP4O75161 Y_RNA.714-201ENST00000517065 90 ntBASIC0.19□□□□□ -2.38
NPHP4O75161 MIR2355-201ENST00000517199 87 ntBASIC0.19□□□□□ -2.38
NPHP4O75161 AC005899.2-201ENST00000584353 90 ntBASIC0.19□□□□□ -2.38
NPHP4O75161 POLR3GP1-201ENST00000594073 261 ntBASIC0.19□□□□□ -2.38
NPHP4O75161 Y_RNA.146-201ENST00000363549 102 ntBASIC0.18□□□□□ -2.38
NPHP4O75161 RNA5SP368-201ENST00000364298 116 ntBASIC0.18□□□□□ -2.38
NPHP4O75161 RNU6-125P-201ENST00000384505 107 ntBASIC0.18□□□□□ -2.38
NPHP4O75161 MIR1278-201ENST00000408753 81 ntBASIC0.18□□□□□ -2.38
NPHP4O75161 FCF1P4-201ENST00000448326 183 ntBASIC0.18□□□□□ -2.38
NPHP4O75161 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.18□□□□□ -2.38
NPHP4O75161 MIR4768-201ENST00000585270 74 ntBASIC0.18□□□□□ -2.38
NPHP4O75161 LARP7P1-201ENST00000605576 316 ntBASIC0.18□□□□□ -2.38
NPHP4O75161 AC020891.4-201ENST00000605745 93 ntBASIC0.18□□□□□ -2.38
NPHP4O75161 MIR4791-201ENST00000607666 84 ntBASIC0.18□□□□□ -2.38
NPHP4O75161 AC092634.7-201ENST00000621022 103 ntBASIC0.18□□□□□ -2.38
NPHP4O75161 AC090625.1-201ENST00000357130 210 ntBASIC0.17□□□□□ -2.38
NPHP4O75161 RNU6-268P-201ENST00000364174 107 ntBASIC0.17□□□□□ -2.38
NPHP4O75161 RNY4P3-201ENST00000365254 95 ntBASIC0.17□□□□□ -2.38
NPHP4O75161 RNU6-708P-201ENST00000384217 107 ntBASIC0.17□□□□□ -2.38
NPHP4O75161 Y_RNA.516-201ENST00000384541 124 ntBASIC0.17□□□□□ -2.38
NPHP4O75161 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
NPHP4O75161 AL590004.1-201ENST00000405321 300 ntBASIC0.17□□□□□ -2.38
NPHP4O75161 MIR548F1-201ENST00000408667 84 ntBASIC0.17□□□□□ -2.38
NPHP4O75161 RNU4-14P-201ENST00000410858 122 ntBASIC0.17□□□□□ -2.38
NPHP4O75161 AL589823.1-201ENST00000429577 183 ntBASIC0.17□□□□□ -2.38
NPHP4O75161 SNRPGP14-201ENST00000435400 219 ntBASIC0.17□□□□□ -2.38
NPHP4O75161 AC108740.1-201ENST00000498629 225 ntBASIC0.17□□□□□ -2.38
NPHP4O75161 RNU6-718P-201ENST00000516166 105 ntBASIC0.17□□□□□ -2.38
NPHP4O75161 RNU6-758P-201ENST00000516292 89 ntBASIC0.17□□□□□ -2.38
NPHP4O75161 AL669831.3-213ENST00000636676 183 ntBASIC0.17□□□□□ -2.38
NPHP4O75161 RNU6-1209P-201ENST00000363655 107 ntBASIC0.16□□□□□ -2.38
NPHP4O75161 Y_RNA.185-201ENST00000363894 100 ntBASIC0.16□□□□□ -2.38
NPHP4O75161 Y_RNA.203-201ENST00000364106 102 ntBASIC0.16□□□□□ -2.38
NPHP4O75161 RNU6-442P-201ENST00000383968 104 ntBASIC0.16□□□□□ -2.38
NPHP4O75161 MIR802-201ENST00000390235 94 ntBASIC0.16□□□□□ -2.38
NPHP4O75161 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.16□□□□□ -2.38
NPHP4O75161 AC090844.1-201ENST00000422019 156 ntBASIC0.16□□□□□ -2.38
NPHP4O75161 SNORA25.12-201ENST00000516202 82 ntBASIC0.16□□□□□ -2.38
NPHP4O75161 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.16□□□□□ -2.38
NPHP4O75161 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.16□□□□□ -2.38
NPHP4O75161 MIR4804-201ENST00000581683 73 ntBASIC0.16□□□□□ -2.38
NPHP4O75161 RNA5SP517-201ENST00000364724 117 ntBASIC0.15□□□□□ -2.39
NPHP4O75161 RNU6-580P-201ENST00000365159 107 ntBASIC0.15□□□□□ -2.39
NPHP4O75161 Y_RNA.370-201ENST00000365589 108 ntBASIC0.15□□□□□ -2.39
NPHP4O75161 MCFD2P1-201ENST00000417812 300 ntBASIC0.15□□□□□ -2.39
NPHP4O75161 MTND4P17-201ENST00000470444 350 ntBASIC0.15□□□□□ -2.39
NPHP4O75161 AC024405.2-202ENST00000532731 184 ntBASIC0.15□□□□□ -2.39
NPHP4O75161 MIR4659A-201ENST00000580269 81 ntBASIC0.15□□□□□ -2.39
NPHP4O75161 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.15□□□□□ -2.39
NPHP4O75161 JPX_2.1-201ENST00000614161 69 ntBASIC0.15□□□□□ -2.39
NPHP4O75161 uc_338.22-201ENST00000622722 187 ntBASIC0.15□□□□□ -2.39
NPHP4O75161 SNORD44.1-201ENST00000363202 61 ntBASIC0.14□□□□□ -2.39
NPHP4O75161 U8.7-201ENST00000364940 136 ntBASIC0.14□□□□□ -2.39
NPHP4O75161 RNA5SP331-201ENST00000364986 107 ntBASIC0.14□□□□□ -2.39
NPHP4O75161 Y_RNA.310-201ENST00000365063 113 ntBASIC0.14□□□□□ -2.39
NPHP4O75161 Y_RNA.341-201ENST00000365341 102 ntBASIC0.14□□□□□ -2.39
NPHP4O75161 Y_RNA.376-201ENST00000365638 108 ntBASIC0.14□□□□□ -2.39
NPHP4O75161 RNU6-1323P-201ENST00000384025 107 ntBASIC0.14□□□□□ -2.39
NPHP4O75161 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.14□□□□□ -2.39
NPHP4O75161 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.14□□□□□ -2.39
NPHP4O75161 SNRPGP12-201ENST00000449481 213 ntBASIC0.14□□□□□ -2.39
NPHP4O75161 RPL23AP54-201ENST00000495129 419 ntBASIC0.14□□□□□ -2.39
NPHP4O75161 AC116353.2-201ENST00000505332 712 ntBASIC0.14□□□□□ -2.39
NPHP4O75161 PRDX4P1-201ENST00000507189 574 ntBASIC0.14□□□□□ -2.39
NPHP4O75161 MIR4676-201ENST00000583078 72 ntBASIC0.14□□□□□ -2.39
NPHP4O75161 uc_338.6-201ENST00000613544 171 ntBASIC0.14□□□□□ -2.39
NPHP4O75161 RNU6-923P-201ENST00000364753 107 ntBASIC0.13□□□□□ -2.39
NPHP4O75161 RNY3P4-201ENST00000384428 101 ntBASIC0.13□□□□□ -2.39
NPHP4O75161 Y_RNA.537-201ENST00000384626 109 ntBASIC0.13□□□□□ -2.39
NPHP4O75161 Y_RNA.577-201ENST00000384794 101 ntBASIC0.13□□□□□ -2.39
NPHP4O75161 SNORD72-201ENST00000390994 80 ntBASIC0.13□□□□□ -2.39
NPHP4O75161 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.13□□□□□ -2.39
NPHP4O75161 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.13□□□□□ -2.39
NPHP4O75161 RNU7-56P-201ENST00000458744 62 ntBASIC0.13□□□□□ -2.39
NPHP4O75161 U8.19-201ENST00000459095 133 ntBASIC0.13□□□□□ -2.39
NPHP4O75161 AC069439.1-201ENST00000494739 167 ntBASIC0.13□□□□□ -2.39
NPHP4O75161 RNU6-830P-201ENST00000516353 107 ntBASIC0.13□□□□□ -2.39
NPHP4O75161 RNU6-720P-201ENST00000516363 108 ntBASIC0.13□□□□□ -2.39
NPHP4O75161 RNU6-307P-201ENST00000516743 106 ntBASIC0.13□□□□□ -2.39
NPHP4O75161 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.13□□□□□ -2.39
NPHP4O75161 AP000753.3-201ENST00000604083 169 ntBASIC0.13□□□□□ -2.39
NPHP4O75161 RBM11P1-201ENST00000604951 799 ntBASIC0.13□□□□□ -2.39
NPHP4O75161 AC022441.3-201ENST00000605737 136 ntBASIC0.13□□□□□ -2.39
NPHP4O75161 RNU6-349P-201ENST00000362402 107 ntBASIC0.13□□□□□ -2.39
NPHP4O75161 Y_RNA.136-201ENST00000363444 102 ntBASIC0.13□□□□□ -2.39
NPHP4O75161 RNU6-1175P-201ENST00000365200 107 ntBASIC0.13□□□□□ -2.39
NPHP4O75161 RNU6-1327P-201ENST00000365302 105 ntBASIC0.13□□□□□ -2.39
NPHP4O75161 MIR518A1-201ENST00000385068 85 ntBASIC0.13□□□□□ -2.39
NPHP4O75161 MT-TN-201ENST00000387400 73 ntBASIC0.13□□□□□ -2.39
NPHP4O75161 SNORD78.2-201ENST00000391076 69 ntBASIC0.13□□□□□ -2.39
NPHP4O75161 Y_RNA.646-201ENST00000410980 101 ntBASIC0.13□□□□□ -2.39
NPHP4O75161 AF228730.4-201ENST00000421457 183 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms