Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
SH2D1AO60880 SNORA8.2-201ENST00000384372 139 ntBASIC0.02□□□□□ -2.41
SH2D1AO60880 SNORA75.6-201ENST00000391318 127 ntBASIC0.02□□□□□ -2.41
SH2D1AO60880 MIR548F1-201ENST00000408667 84 ntBASIC0.02□□□□□ -2.41
SH2D1AO60880 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.02□□□□□ -2.41
SH2D1AO60880 Z83846.1-201ENST00000446798 265 ntBASIC0.02□□□□□ -2.41
SH2D1AO60880 RNU7-102P-201ENST00000458948 62 ntBASIC0.02□□□□□ -2.41
SH2D1AO60880 snoU13.16-201ENST00000459350 104 ntBASIC0.02□□□□□ -2.41
SH2D1AO60880 MTND4P17-201ENST00000470444 350 ntBASIC0.02□□□□□ -2.41
SH2D1AO60880 AC144568.1-201ENST00000520139 137 ntBASIC0.02□□□□□ -2.41
SH2D1AO60880 AC069113.3-201ENST00000521019 150 ntBASIC0.02□□□□□ -2.41
SH2D1AO60880 RPL23AP91-201ENST00000569211 455 ntBASIC0.02□□□□□ -2.41
SH2D1AO60880 MIR4315-1-201ENST00000636800 73 ntBASIC0.02□□□□□ -2.41
SH2D1AO60880 MIR4315-2-201ENST00000640925 73 ntBASIC0.02□□□□□ -2.41
SH2D1AO60880 AC010332.2-201ENST00000613083 1904 ntBASIC0.02□□□□□ -2.41
SH2D1AO60880 SNORD81.1-201ENST00000363064 77 ntBASIC0.01□□□□□ -2.41
SH2D1AO60880 SNORA24-201ENST00000384096 131 ntBASIC0.01□□□□□ -2.41
SH2D1AO60880 Y_RNA.494-201ENST00000384432 111 ntBASIC0.01□□□□□ -2.41
SH2D1AO60880 RNU6-310P-201ENST00000384655 107 ntBASIC0.01□□□□□ -2.41
SH2D1AO60880 MIR1277-201ENST00000408536 78 ntBASIC0.01□□□□□ -2.41
SH2D1AO60880 Y_RNA.605-201ENST00000410577 105 ntBASIC0.01□□□□□ -2.41
SH2D1AO60880 AC016907.1-201ENST00000419483 435 ntBASIC0.01□□□□□ -2.41
SH2D1AO60880 SNORD11-201ENST00000459124 84 ntBASIC0.01□□□□□ -2.41
SH2D1AO60880 RNU6-237P-201ENST00000515985 71 ntBASIC0.01□□□□□ -2.41
SH2D1AO60880 RNU6-718P-201ENST00000516166 105 ntBASIC0.01□□□□□ -2.41
SH2D1AO60880 RNU7-30P-201ENST00000516835 62 ntBASIC0.01□□□□□ -2.41
SH2D1AO60880 RNU6-264P-201ENST00000517134 104 ntBASIC0.01□□□□□ -2.41
SH2D1AO60880 MIR4423-201ENST00000580922 80 ntBASIC0.01□□□□□ -2.41
SH2D1AO60880 AC002553.4-201ENST00000616896 331 ntBASIC0.01□□□□□ -2.41
SH2D1AO60880 U2.1-201ENST00000618978 145 ntBASIC0.01□□□□□ -2.41
SH2D1AO60880 uc_338.16-201ENST00000621804 95 ntBASIC0.01□□□□□ -2.41
SH2D1AO60880 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0□□□□□ -2.41
SH2D1AO60880 RNU6-890P-201ENST00000384121 107 ntBASIC0□□□□□ -2.41
SH2D1AO60880 MIR125B2-201ENST00000385128 89 ntBASIC0□□□□□ -2.41
SH2D1AO60880 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0□□□□□ -2.41
SH2D1AO60880 AC236972.2-201ENST00000434979 310 ntBASIC0□□□□□ -2.41
SH2D1AO60880 RNU6-437P-201ENST00000459408 95 ntBASIC0□□□□□ -2.41
SH2D1AO60880 AC069439.1-201ENST00000494739 167 ntBASIC0□□□□□ -2.41
SH2D1AO60880 RNU7-25P-201ENST00000516544 62 ntBASIC0□□□□□ -2.41
SH2D1AO60880 AL589743.1-201ENST00000551932 2712 ntBASIC0□□□□□ -2.41
SH2D1AO60880 MIR2681-201ENST00000581814 105 ntBASIC0□□□□□ -2.41
SH2D1AO60880 MIR8070-201ENST00000616510 88 ntBASIC0□□□□□ -2.41
SH2D1AO60880 AC134878.1-201ENST00000619901 243 ntBASIC0□□□□□ -2.41
SH2D1AO60880 AC138305.3-201ENST00000624988 240 ntBASIC0□□□□□ -2.41
SH2D1AO60880 MIR924-201ENST00000638017 53 ntBASIC0□□□□□ -2.41
SH2D1AO60880 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0□□□□□ -2.41
SH2D1AO60880 Y_RNA.27-201ENST00000362540 103 ntBASIC-0.01□□□□□ -2.41
SH2D1AO60880 RNU6-1188P-201ENST00000363795 107 ntBASIC-0.01□□□□□ -2.41
SH2D1AO60880 RNU4-50P-201ENST00000364361 141 ntBASIC-0.01□□□□□ -2.41
SH2D1AO60880 SNORA63C-201ENST00000364578 129 ntBASIC-0.01□□□□□ -2.41
SH2D1AO60880 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.01□□□□□ -2.41
SH2D1AO60880 RNU6-364P-201ENST00000384387 107 ntBASIC-0.01□□□□□ -2.41
SH2D1AO60880 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.01□□□□□ -2.41
SH2D1AO60880 MIR628-201ENST00000385229 95 ntBASIC-0.01□□□□□ -2.41
SH2D1AO60880 RNU6-370P-201ENST00000411008 104 ntBASIC-0.01□□□□□ -2.41
SH2D1AO60880 AL589823.1-201ENST00000429577 183 ntBASIC-0.01□□□□□ -2.41
SH2D1AO60880 MIR18B-201ENST00000454574 71 ntBASIC-0.01□□□□□ -2.41
SH2D1AO60880 RNU6-1132P-201ENST00000459214 107 ntBASIC-0.01□□□□□ -2.41
SH2D1AO60880 MIR3678-201ENST00000578455 94 ntBASIC-0.01□□□□□ -2.41
SH2D1AO60880 MIR3145-201ENST00000580727 82 ntBASIC-0.01□□□□□ -2.41
SH2D1AO60880 AC011712.1-201ENST00000588959 234 ntBASIC-0.01□□□□□ -2.41
SH2D1AO60880 AL080274.1-201ENST00000605565 220 ntBASIC-0.01□□□□□ -2.41
SH2D1AO60880 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC-0.01□□□□□ -2.41
SH2D1AO60880 AC098679.4-201ENST00000624241 654 ntBASIC-0.01□□□□□ -2.41
SH2D1AO60880 SNORA42.1-201ENST00000363515 137 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 RNU6-674P-201ENST00000363831 107 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 RNU6-747P-201ENST00000390928 104 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 RNU6-241P-201ENST00000391148 104 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 MIR1257-201ENST00000408490 117 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 RNU6-447P-201ENST00000410293 104 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 RNU6-355P-201ENST00000410427 104 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 SNORA36B-201ENST00000410438 131 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 RNU6-791P-201ENST00000410467 104 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 RNU6-705P-201ENST00000410601 104 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 RNU6-860P-201ENST00000410860 104 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 RNU6-785P-201ENST00000411324 104 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 RNU7-185P-201ENST00000459215 60 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 RNU7-141P-201ENST00000459304 62 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 RNU6-911P-201ENST00000516523 104 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 RNU6-1223P-201ENST00000517124 104 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 AC112693.2-201ENST00000556538 232 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 SNORD92-201ENST00000585078 85 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 AC005357.1-201ENST00000588399 301 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 AL355297.3-201ENST00000604082 446 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 U6.90-201ENST00000614007 104 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 U6.70-201ENST00000620287 104 ntBASIC-0.02□□□□□ -2.41
SH2D1AO60880 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
SH2D1AO60880 SNORA36.1-201ENST00000363424 132 ntBASIC-0.03□□□□□ -2.41
SH2D1AO60880 Y_RNA.314-201ENST00000365114 102 ntBASIC-0.03□□□□□ -2.41
SH2D1AO60880 MIR518F-201ENST00000384973 87 ntBASIC-0.03□□□□□ -2.41
SH2D1AO60880 RNU6-913P-201ENST00000390913 95 ntBASIC-0.03□□□□□ -2.41
SH2D1AO60880 MIR548O-201ENST00000408583 114 ntBASIC-0.03□□□□□ -2.41
SH2D1AO60880 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms