Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RNU6-63P-201ENST00000516690 95 ntBASIC1.59□□□□□ -2.16
CACNA1FO60840 RNU7-116P-201ENST00000516940 62 ntBASIC1.59□□□□□ -2.16
CACNA1FO60840 U2.22-201ENST00000636441 106 ntBASIC1.59□□□□□ -2.16
CACNA1FO60840 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
CACNA1FO60840 SNORD50.2-201ENST00000365465 70 ntBASIC1.58□□□□□ -2.16
CACNA1FO60840 Y_RNA.357-201ENST00000365487 109 ntBASIC1.58□□□□□ -2.16
CACNA1FO60840 MIR15B-201ENST00000385045 98 ntBASIC1.58□□□□□ -2.16
CACNA1FO60840 MIR513C-201ENST00000401352 84 ntBASIC1.58□□□□□ -2.16
CACNA1FO60840 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.58□□□□□ -2.16
CACNA1FO60840 MIR1262-201ENST00000408276 93 ntBASIC1.58□□□□□ -2.16
CACNA1FO60840 RNU6-394P-201ENST00000410735 107 ntBASIC1.58□□□□□ -2.16
CACNA1FO60840 RNA5SP450-201ENST00000411206 102 ntBASIC1.58□□□□□ -2.16
CACNA1FO60840 AL158823.1-201ENST00000418441 478 ntBASIC1.58□□□□□ -2.16
CACNA1FO60840 RNU7-94P-201ENST00000459576 63 ntBASIC1.58□□□□□ -2.16
CACNA1FO60840 SNORA48.11-201ENST00000517015 89 ntBASIC1.58□□□□□ -2.16
CACNA1FO60840 RNU7-172P-201ENST00000517125 64 ntBASIC1.58□□□□□ -2.16
CACNA1FO60840 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.58□□□□□ -2.16
CACNA1FO60840 MIR3133-201ENST00000583157 78 ntBASIC1.58□□□□□ -2.16
CACNA1FO60840 RNU6-674P-201ENST00000363831 107 ntBASIC1.58□□□□□ -2.16
CACNA1FO60840 SNORD45.3-201ENST00000363836 72 ntBASIC1.58□□□□□ -2.16
CACNA1FO60840 RNU6-704P-201ENST00000364162 103 ntBASIC1.58□□□□□ -2.16
CACNA1FO60840 RNU6-1080P-201ENST00000383982 107 ntBASIC1.58□□□□□ -2.16
CACNA1FO60840 Y_RNA.464-201ENST00000384282 110 ntBASIC1.58□□□□□ -2.16
CACNA1FO60840 SNORA72-201ENST00000384339 132 ntBASIC1.58□□□□□ -2.16
CACNA1FO60840 Y_RNA.572-201ENST00000384757 98 ntBASIC1.58□□□□□ -2.16
CACNA1FO60840 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CACNA1FO60840 RNU2-7P-201ENST00000410794 178 ntBASIC1.58□□□□□ -2.16
CACNA1FO60840 AC010154.1-201ENST00000425857 269 ntBASIC1.58□□□□□ -2.16
CACNA1FO60840 RNU6-197P-201ENST00000516680 100 ntBASIC1.58□□□□□ -2.16
CACNA1FO60840 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.58□□□□□ -2.16
CACNA1FO60840 RMST_2.1-201ENST00000617263 136 ntBASIC1.58□□□□□ -2.16
CACNA1FO60840 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.58□□□□□ -2.16
CACNA1FO60840 AC132825.6-201ENST00000638861 357 ntBASIC1.58□□□□□ -2.16
CACNA1FO60840 AC018630.2-201ENST00000534866 2403 ntBASIC1.57□□□□□ -2.16
CACNA1FO60840 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
CACNA1FO60840 RNU1-58P-201ENST00000362413 163 ntBASIC1.57□□□□□ -2.16
CACNA1FO60840 RNU6-312P-201ENST00000364629 107 ntBASIC1.57□□□□□ -2.16
CACNA1FO60840 RNU6-1130P-201ENST00000365434 107 ntBASIC1.57□□□□□ -2.16
CACNA1FO60840 RNY3P5-201ENST00000384127 102 ntBASIC1.57□□□□□ -2.16
CACNA1FO60840 MIR616-201ENST00000385293 97 ntBASIC1.57□□□□□ -2.16
CACNA1FO60840 HMGN2P39-201ENST00000398005 273 ntBASIC1.57□□□□□ -2.16
CACNA1FO60840 RNU2-55P-201ENST00000411146 174 ntBASIC1.57□□□□□ -2.16
CACNA1FO60840 AC016909.1-201ENST00000415916 166 ntBASIC1.57□□□□□ -2.16
CACNA1FO60840 EBAG9P1-201ENST00000418955 543 ntBASIC1.57□□□□□ -2.16
CACNA1FO60840 AC123900.1-201ENST00000420390 96 ntBASIC1.57□□□□□ -2.16
CACNA1FO60840 AL162725.1-201ENST00000435405 301 ntBASIC1.57□□□□□ -2.16
CACNA1FO60840 AC245102.2-201ENST00000448956 180 ntBASIC1.57□□□□□ -2.16
CACNA1FO60840 AC010598.1-201ENST00000510378 103 ntBASIC1.57□□□□□ -2.16
CACNA1FO60840 RNU4-41P-201ENST00000364426 143 ntBASIC1.56□□□□□ -2.16
CACNA1FO60840 RNU6-1082P-201ENST00000364574 107 ntBASIC1.56□□□□□ -2.16
CACNA1FO60840 Y_RNA.441-201ENST00000384123 112 ntBASIC1.56□□□□□ -2.16
CACNA1FO60840 RNU6-80P-201ENST00000384195 107 ntBASIC1.56□□□□□ -2.16
CACNA1FO60840 RNU6-804P-201ENST00000384286 107 ntBASIC1.56□□□□□ -2.16
CACNA1FO60840 RNU6-239P-201ENST00000390990 99 ntBASIC1.56□□□□□ -2.16
CACNA1FO60840 RNA5SP212-201ENST00000391223 107 ntBASIC1.56□□□□□ -2.16
CACNA1FO60840 MIR873-201ENST00000401120 77 ntBASIC1.56□□□□□ -2.16
CACNA1FO60840 RPL30P13-201ENST00000418873 348 ntBASIC1.56□□□□□ -2.16
CACNA1FO60840 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.56□□□□□ -2.16
CACNA1FO60840 AC245517.4-201ENST00000448601 281 ntBASIC1.56□□□□□ -2.16
CACNA1FO60840 AC087343.1-201ENST00000477341 475 ntBASIC1.56□□□□□ -2.16
CACNA1FO60840 RNU6-856P-201ENST00000516959 98 ntBASIC1.56□□□□□ -2.16
CACNA1FO60840 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.56□□□□□ -2.16
CACNA1FO60840 AC080100.1-201ENST00000624239 5356 ntBASIC1.56□□□□□ -2.16
CACNA1FO60840 RNU6-199P-201ENST00000362954 107 ntBASIC1.56□□□□□ -2.16
CACNA1FO60840 RNA5SP493-201ENST00000364115 91 ntBASIC1.56□□□□□ -2.16
CACNA1FO60840 RNU6-969P-201ENST00000383900 105 ntBASIC1.56□□□□□ -2.16
CACNA1FO60840 RNU6-203P-201ENST00000384038 104 ntBASIC1.56□□□□□ -2.16
CACNA1FO60840 RNU6-959P-201ENST00000384671 107 ntBASIC1.56□□□□□ -2.16
CACNA1FO60840 MIR513A1-201ENST00000385138 129 ntBASIC1.56□□□□□ -2.16
CACNA1FO60840 MIR526A2-201ENST00000390198 65 ntBASIC1.56□□□□□ -2.16
CACNA1FO60840 RNU11-5P-201ENST00000391216 129 ntBASIC1.56□□□□□ -2.16
CACNA1FO60840 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.56□□□□□ -2.16
CACNA1FO60840 SNORA25.12-201ENST00000516202 82 ntBASIC1.56□□□□□ -2.16
CACNA1FO60840 RNU6-789P-201ENST00000517105 102 ntBASIC1.56□□□□□ -2.16
CACNA1FO60840 AL353149.1-201ENST00000610667 244 ntBASIC1.56□□□□□ -2.16
CACNA1FO60840 AL773524.1-201ENST00000614065 229 ntBASIC1.56□□□□□ -2.16
CACNA1FO60840 uc_338.4-201ENST00000616635 176 ntBASIC1.56□□□□□ -2.16
CACNA1FO60840 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
CACNA1FO60840 RNU1-22P-201ENST00000363334 158 ntBASIC1.55□□□□□ -2.16
CACNA1FO60840 RNU6-768P-201ENST00000384683 107 ntBASIC1.55□□□□□ -2.16
CACNA1FO60840 SNORA40.6-201ENST00000391153 128 ntBASIC1.55□□□□□ -2.16
CACNA1FO60840 AC010409.1-201ENST00000487382 476 ntBASIC1.55□□□□□ -2.16
CACNA1FO60840 RNA5SP480-201ENST00000516840 109 ntBASIC1.55□□□□□ -2.16
CACNA1FO60840 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.55□□□□□ -2.16
CACNA1FO60840 RPL23AP91-201ENST00000569211 455 ntBASIC1.55□□□□□ -2.16
CACNA1FO60840 AL929325.1-201ENST00000603096 117 ntBASIC1.55□□□□□ -2.16
CACNA1FO60840 Y_RNA.778-201ENST00000620203 90 ntBASIC1.55□□□□□ -2.16
CACNA1FO60840 MIR6844-201ENST00000637122 62 ntBASIC1.55□□□□□ -2.16
CACNA1FO60840 AC100821.1-201ENST00000523153 2479 ntBASIC1.55□□□□□ -2.16
CACNA1FO60840 RNY1P5-201ENST00000383890 115 ntBASIC1.54□□□□□ -2.16
CACNA1FO60840 RNU6-449P-201ENST00000383914 107 ntBASIC1.54□□□□□ -2.16
CACNA1FO60840 Y_RNA.497-201ENST00000384447 98 ntBASIC1.54□□□□□ -2.16
CACNA1FO60840 SNORA8-201ENST00000384574 139 ntBASIC1.54□□□□□ -2.16
CACNA1FO60840 RNU6-136P-201ENST00000384663 107 ntBASIC1.54□□□□□ -2.16
CACNA1FO60840 RNU11-3P-201ENST00000391111 133 ntBASIC1.54□□□□□ -2.16
CACNA1FO60840 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.54□□□□□ -2.16
CACNA1FO60840 AC009474.2-201ENST00000451383 136 ntBASIC1.54□□□□□ -2.16
CACNA1FO60840 SNORD11-201ENST00000459124 84 ntBASIC1.54□□□□□ -2.16
CACNA1FO60840 AL049830.1-201ENST00000468034 425 ntBASIC1.54□□□□□ -2.16
CACNA1FO60840 RNU1-142P-201ENST00000516682 145 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms