Protein–RNA interactions for Protein: O60292

SIPA1L3, Signal-induced proliferation-associated 1-like protein 3, humanhuman

Predicted RBP Predictions only

Length 1,781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3O60292 SNORD14E-201ENST00000364009 85 ntBASIC-1□□□□□ -2.57
SIPA1L3O60292 SNORA1-201ENST00000384107 130 ntBASIC-1□□□□□ -2.57
SIPA1L3O60292 MTND1P11-201ENST00000456661 876 ntBASIC-1□□□□□ -2.57
SIPA1L3O60292 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1□□□□□ -2.57
SIPA1L3O60292 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1□□□□□ -2.57
SIPA1L3O60292 AL137161.1-201ENST00000532231 390 ntBASIC-1□□□□□ -2.57
SIPA1L3O60292 AC093023.1-201ENST00000547375 507 ntBASIC-1□□□□□ -2.57
SIPA1L3O60292 MTND1P24-201ENST00000552175 861 ntBASIC-1□□□□□ -2.57
SIPA1L3O60292 MIR3682-201ENST00000581338 84 ntBASIC-1□□□□□ -2.57
SIPA1L3O60292 AC005972.2-201ENST00000604690 348 ntBASIC-1□□□□□ -2.57
SIPA1L3O60292 MIR6082-201ENST00000613604 109 ntBASIC-1□□□□□ -2.57
SIPA1L3O60292 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.01□□□□□ -2.57
SIPA1L3O60292 RNU6-268P-201ENST00000364174 107 ntBASIC-1.01□□□□□ -2.57
SIPA1L3O60292 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.01□□□□□ -2.57
SIPA1L3O60292 MIR1285-2-201ENST00000408311 88 ntBASIC-1.01□□□□□ -2.57
SIPA1L3O60292 AC006210.1-201ENST00000424882 111 ntBASIC-1.01□□□□□ -2.57
SIPA1L3O60292 RPL30P15-201ENST00000457129 321 ntBASIC-1.01□□□□□ -2.57
SIPA1L3O60292 AC091179.3-201ENST00000474761 144 ntBASIC-1.01□□□□□ -2.57
SIPA1L3O60292 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.01□□□□□ -2.57
SIPA1L3O60292 MIR4441-201ENST00000582623 100 ntBASIC-1.01□□□□□ -2.57
SIPA1L3O60292 MIR4499-201ENST00000584834 69 ntBASIC-1.01□□□□□ -2.57
SIPA1L3O60292 AL133215.3-201ENST00000609801 448 ntBASIC-1.01□□□□□ -2.57
SIPA1L3O60292 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.01□□□□□ -2.57
SIPA1L3O60292 RNU4-92P-201ENST00000363783 136 ntBASIC-1.01□□□□□ -2.57
SIPA1L3O60292 RNU6-931P-201ENST00000363850 107 ntBASIC-1.01□□□□□ -2.57
SIPA1L3O60292 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.01□□□□□ -2.57
SIPA1L3O60292 RNY4P34-201ENST00000364779 95 ntBASIC-1.01□□□□□ -2.57
SIPA1L3O60292 RNU6-702P-201ENST00000364982 107 ntBASIC-1.01□□□□□ -2.57
SIPA1L3O60292 RNU6-926P-201ENST00000384075 107 ntBASIC-1.01□□□□□ -2.57
SIPA1L3O60292 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.01□□□□□ -2.57
SIPA1L3O60292 RNU6-901P-201ENST00000384593 106 ntBASIC-1.01□□□□□ -2.57
SIPA1L3O60292 RNU6-455P-201ENST00000384681 107 ntBASIC-1.01□□□□□ -2.57
SIPA1L3O60292 USP9YP16-201ENST00000430287 407 ntBASIC-1.01□□□□□ -2.57
SIPA1L3O60292 AC092807.2-201ENST00000609367 243 ntBASIC-1.01□□□□□ -2.57
SIPA1L3O60292 AL158063.1-201ENST00000615349 536 ntBASIC-1.01□□□□□ -2.57
SIPA1L3O60292 AC072046.2-201ENST00000618366 268 ntBASIC-1.01□□□□□ -2.57
SIPA1L3O60292 RNU6-1145P-201ENST00000384246 107 ntBASIC-1.02□□□□□ -2.57
SIPA1L3O60292 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.02□□□□□ -2.57
SIPA1L3O60292 RNU6-721P-201ENST00000410155 105 ntBASIC-1.02□□□□□ -2.57
SIPA1L3O60292 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.02□□□□□ -2.57
SIPA1L3O60292 RNU6-765P-201ENST00000516916 99 ntBASIC-1.02□□□□□ -2.57
SIPA1L3O60292 RNU6-82P-201ENST00000363970 107 ntBASIC-1.03□□□□□ -2.57
SIPA1L3O60292 RNU6-660P-201ENST00000364566 109 ntBASIC-1.03□□□□□ -2.57
SIPA1L3O60292 DEFB131E-201ENST00000532329 154 ntBASIC-1.03□□□□□ -2.57
SIPA1L3O60292 AC090616.2-202ENST00000584248 222 ntBASIC-1.03□□□□□ -2.57
SIPA1L3O60292 AC073648.5-201ENST00000603502 305 ntBASIC-1.03□□□□□ -2.57
SIPA1L3O60292 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.03□□□□□ -2.58
SIPA1L3O60292 RNU5E-5P-201ENST00000365379 116 ntBASIC-1.03□□□□□ -2.58
SIPA1L3O60292 RNU6-1257P-201ENST00000384625 110 ntBASIC-1.03□□□□□ -2.58
SIPA1L3O60292 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.03□□□□□ -2.58
SIPA1L3O60292 SNRPGP14-201ENST00000435400 219 ntBASIC-1.03□□□□□ -2.58
SIPA1L3O60292 RNU7-175P-201ENST00000515915 61 ntBASIC-1.03□□□□□ -2.58
SIPA1L3O60292 RNU6-706P-201ENST00000517229 104 ntBASIC-1.03□□□□□ -2.58
SIPA1L3O60292 AC011458.1-201ENST00000604034 617 ntBASIC-1.03□□□□□ -2.58
SIPA1L3O60292 JPX_2.1-201ENST00000614161 69 ntBASIC-1.03□□□□□ -2.58
SIPA1L3O60292 uc_338.19-201ENST00000616808 99 ntBASIC-1.03□□□□□ -2.58
SIPA1L3O60292 AC009161.2-201ENST00000624626 138 ntBASIC-1.03□□□□□ -2.58
SIPA1L3O60292 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.03□□□□□ -2.58
SIPA1L3O60292 MTND5P18-201ENST00000445624 1801 ntBASIC-1.04□□□□□ -2.58
SIPA1L3O60292 MIR410-201ENST00000362222 80 ntBASIC-1.04□□□□□ -2.58
SIPA1L3O60292 MIR30D-201ENST00000362283 70 ntBASIC-1.04□□□□□ -2.58
SIPA1L3O60292 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.04□□□□□ -2.58
SIPA1L3O60292 RNU6-456P-201ENST00000384493 107 ntBASIC-1.04□□□□□ -2.58
SIPA1L3O60292 MIR181B2-201ENST00000385004 89 ntBASIC-1.04□□□□□ -2.58
SIPA1L3O60292 MIR518B-201ENST00000385127 83 ntBASIC-1.04□□□□□ -2.58
SIPA1L3O60292 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.04□□□□□ -2.58
SIPA1L3O60292 USP9YP12-201ENST00000450481 570 ntBASIC-1.04□□□□□ -2.58
SIPA1L3O60292 RNU6-274P-201ENST00000459566 107 ntBASIC-1.04□□□□□ -2.58
SIPA1L3O60292 AC010655.3-201ENST00000478818 450 ntBASIC-1.04□□□□□ -2.58
SIPA1L3O60292 SNORD27.1-201ENST00000516319 72 ntBASIC-1.04□□□□□ -2.58
SIPA1L3O60292 SNORD38.3-201ENST00000516599 73 ntBASIC-1.04□□□□□ -2.58
SIPA1L3O60292 RNU7-188P-201ENST00000517063 64 ntBASIC-1.04□□□□□ -2.58
SIPA1L3O60292 MIR5696-201ENST00000578474 85 ntBASIC-1.04□□□□□ -2.58
SIPA1L3O60292 MIR3179-1-201ENST00000578940 84 ntBASIC-1.04□□□□□ -2.58
SIPA1L3O60292 MIR3179-2-201ENST00000579107 84 ntBASIC-1.04□□□□□ -2.58
SIPA1L3O60292 MIR3179-3-201ENST00000579566 84 ntBASIC-1.04□□□□□ -2.58
SIPA1L3O60292 AC006566.1-201ENST00000608943 513 ntBASIC-1.04□□□□□ -2.58
SIPA1L3O60292 MIR3179-4-201ENST00000617599 84 ntBASIC-1.04□□□□□ -2.58
SIPA1L3O60292 Z97988.1-201ENST00000637697 135 ntBASIC-1.04□□□□□ -2.58
SIPA1L3O60292 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.05□□□□□ -2.58
SIPA1L3O60292 SNORD50.1-201ENST00000362987 71 ntBASIC-1.05□□□□□ -2.58
SIPA1L3O60292 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.05□□□□□ -2.58
SIPA1L3O60292 RNU6-767P-201ENST00000384132 107 ntBASIC-1.05□□□□□ -2.58
SIPA1L3O60292 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.05□□□□□ -2.58
SIPA1L3O60292 MTND2P18-201ENST00000419962 1030 ntBASIC-1.05□□□□□ -2.58
SIPA1L3O60292 AC131281.1-201ENST00000522984 164 ntBASIC-1.05□□□□□ -2.58
SIPA1L3O60292 AL357078.3-201ENST00000607528 618 ntBASIC-1.05□□□□□ -2.58
SIPA1L3O60292 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.06□□□□□ -2.58
SIPA1L3O60292 RNU5F-7P-201ENST00000363696 115 ntBASIC-1.06□□□□□ -2.58
SIPA1L3O60292 SNORD114-29-201ENST00000364819 70 ntBASIC-1.06□□□□□ -2.58
SIPA1L3O60292 SNORA69-201ENST00000383895 132 ntBASIC-1.06□□□□□ -2.58
SIPA1L3O60292 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.06□□□□□ -2.58
SIPA1L3O60292 RNU6-159P-201ENST00000391080 106 ntBASIC-1.06□□□□□ -2.58
SIPA1L3O60292 AL500527.2-201ENST00000454105 95 ntBASIC-1.06□□□□□ -2.58
SIPA1L3O60292 snoU109.3-201ENST00000459477 145 ntBASIC-1.06□□□□□ -2.58
SIPA1L3O60292 RNU7-161P-201ENST00000517289 62 ntBASIC-1.06□□□□□ -2.58
SIPA1L3O60292 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.06□□□□□ -2.58
SIPA1L3O60292 AC140658.3-201ENST00000567603 271 ntBASIC-1.06□□□□□ -2.58
SIPA1L3O60292 RNU5F-6P-201ENST00000362979 116 ntBASIC-1.06□□□□□ -2.58
SIPA1L3O60292 RNY1P16-201ENST00000363063 111 ntBASIC-1.06□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms