Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC022306.2-201ENST00000617563 647 ntBASIC-0.32□□□□□ -2.46
SGCEO43556 RNU6-961P-201ENST00000363893 105 ntBASIC-0.33□□□□□ -2.46
SGCEO43556 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.33□□□□□ -2.46
SGCEO43556 AC090844.1-201ENST00000422019 156 ntBASIC-0.33□□□□□ -2.46
SGCEO43556 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-0.33□□□□□ -2.46
SGCEO43556 RNU4-49P-201ENST00000516080 140 ntBASIC-0.33□□□□□ -2.46
SGCEO43556 RNU6-436P-201ENST00000516171 114 ntBASIC-0.33□□□□□ -2.46
SGCEO43556 IGLVI-20-201ENST00000519296 130 ntBASIC-0.33□□□□□ -2.46
SGCEO43556 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.33□□□□□ -2.46
SGCEO43556 AC055872.1-201ENST00000570978 278 ntBASIC-0.33□□□□□ -2.46
SGCEO43556 AC008507.4-201ENST00000585464 127 ntBASIC-0.33□□□□□ -2.46
SGCEO43556 POLR3GP1-201ENST00000594073 261 ntBASIC-0.33□□□□□ -2.46
SGCEO43556 AL109933.3-201ENST00000619095 188 ntBASIC-0.33□□□□□ -2.46
SGCEO43556 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.34□□□□□ -2.46
SGCEO43556 SNORD114-31-201ENST00000363219 75 ntBASIC-0.34□□□□□ -2.46
SGCEO43556 RNA5SP275-201ENST00000363936 118 ntBASIC-0.34□□□□□ -2.46
SGCEO43556 SNORA2A-201ENST00000383885 135 ntBASIC-0.34□□□□□ -2.46
SGCEO43556 AL512326.2-201ENST00000426359 151 ntBASIC-0.34□□□□□ -2.46
SGCEO43556 AC236972.2-201ENST00000434979 310 ntBASIC-0.34□□□□□ -2.46
SGCEO43556 AC104692.1-201ENST00000472406 90 ntBASIC-0.34□□□□□ -2.46
SGCEO43556 RNU6-155P-201ENST00000516347 100 ntBASIC-0.34□□□□□ -2.46
SGCEO43556 RNU6-1088P-201ENST00000516850 104 ntBASIC-0.34□□□□□ -2.46
SGCEO43556 MIR2681-201ENST00000581814 105 ntBASIC-0.34□□□□□ -2.46
SGCEO43556 MIR5188-201ENST00000583467 113 ntBASIC-0.34□□□□□ -2.46
SGCEO43556 AC018462.2-201ENST00000605375 395 ntBASIC-0.34□□□□□ -2.46
SGCEO43556 MIR6740-201ENST00000618268 113 ntBASIC-0.34□□□□□ -2.46
SGCEO43556 AC134878.1-201ENST00000619901 243 ntBASIC-0.34□□□□□ -2.46
SGCEO43556 MIR1321-201ENST00000637766 79 ntBASIC-0.34□□□□□ -2.46
SGCEO43556 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.35□□□□□ -2.47
SGCEO43556 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.35□□□□□ -2.47
SGCEO43556 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.35□□□□□ -2.47
SGCEO43556 SNORA24-201ENST00000384096 131 ntBASIC-0.35□□□□□ -2.47
SGCEO43556 MIR518F-201ENST00000384973 87 ntBASIC-0.35□□□□□ -2.47
SGCEO43556 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.35□□□□□ -2.47
SGCEO43556 AC009161.1-201ENST00000417306 376 ntBASIC-0.35□□□□□ -2.47
SGCEO43556 AC096531.1-201ENST00000419107 107 ntBASIC-0.35□□□□□ -2.47
SGCEO43556 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.35□□□□□ -2.47
SGCEO43556 AC005176.2-201ENST00000596933 147 ntBASIC-0.35□□□□□ -2.47
SGCEO43556 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.35□□□□□ -2.47
SGCEO43556 MIR7107-201ENST00000611489 80 ntBASIC-0.35□□□□□ -2.47
SGCEO43556 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.36□□□□□ -2.47
SGCEO43556 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.36□□□□□ -2.47
SGCEO43556 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.36□□□□□ -2.47
SGCEO43556 RNU6-780P-201ENST00000391030 104 ntBASIC-0.36□□□□□ -2.47
SGCEO43556 RNU7-67P-201ENST00000459003 62 ntBASIC-0.36□□□□□ -2.47
SGCEO43556 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.36□□□□□ -2.47
SGCEO43556 RNU6-187P-201ENST00000384139 106 ntBASIC-0.37□□□□□ -2.47
SGCEO43556 MIR588-201ENST00000384900 83 ntBASIC-0.37□□□□□ -2.47
SGCEO43556 SNORA26.5-201ENST00000391215 123 ntBASIC-0.37□□□□□ -2.47
SGCEO43556 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.37□□□□□ -2.47
SGCEO43556 RNU2-66P-201ENST00000410650 161 ntBASIC-0.37□□□□□ -2.47
SGCEO43556 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.37□□□□□ -2.47
SGCEO43556 FCF1P4-201ENST00000448326 183 ntBASIC-0.37□□□□□ -2.47
SGCEO43556 SNORD4A-201ENST00000459174 72 ntBASIC-0.37□□□□□ -2.47
SGCEO43556 RNU7-129P-201ENST00000516128 62 ntBASIC-0.37□□□□□ -2.47
SGCEO43556 RNU6-782P-201ENST00000516852 104 ntBASIC-0.37□□□□□ -2.47
SGCEO43556 MIR4645-201ENST00000583158 77 ntBASIC-0.37□□□□□ -2.47
SGCEO43556 MIR3611-201ENST00000584484 83 ntBASIC-0.37□□□□□ -2.47
SGCEO43556 AP003357.1-201ENST00000604497 148 ntBASIC-0.37□□□□□ -2.47
SGCEO43556 AC006157.1-201ENST00000611750 366 ntBASIC-0.37□□□□□ -2.47
SGCEO43556 MIR6779-201ENST00000617283 64 ntBASIC-0.37□□□□□ -2.47
SGCEO43556 SNORA1.1-201ENST00000364671 133 ntBASIC-0.38□□□□□ -2.47
SGCEO43556 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.38□□□□□ -2.47
SGCEO43556 MIR329-2-201ENST00000385029 84 ntBASIC-0.38□□□□□ -2.47
SGCEO43556 MIR760-201ENST00000390220 80 ntBASIC-0.38□□□□□ -2.47
SGCEO43556 RNU6-269P-201ENST00000391077 97 ntBASIC-0.38□□□□□ -2.47
SGCEO43556 RNU7-165P-201ENST00000458864 60 ntBASIC-0.38□□□□□ -2.47
SGCEO43556 RNU7-159P-201ENST00000459284 62 ntBASIC-0.38□□□□□ -2.47
SGCEO43556 AC026782.1-201ENST00000512952 449 ntBASIC-0.38□□□□□ -2.47
SGCEO43556 MIR4790-201ENST00000577799 79 ntBASIC-0.38□□□□□ -2.47
SGCEO43556 AC060780.3-201ENST00000589464 80 ntBASIC-0.38□□□□□ -2.47
SGCEO43556 AL670379.3-201ENST00000605040 251 ntBASIC-0.38□□□□□ -2.47
SGCEO43556 RN7SKP299-201ENST00000606679 301 ntBASIC-0.38□□□□□ -2.47
SGCEO43556 AC090617.10-201ENST00000624308 134 ntBASIC-0.38□□□□□ -2.47
SGCEO43556 MIR6828-201ENST00000636181 60 ntBASIC-0.38□□□□□ -2.47
SGCEO43556 RNU6-161P-201ENST00000363051 106 ntBASIC-0.39□□□□□ -2.47
SGCEO43556 SNORD114-28-201ENST00000363610 72 ntBASIC-0.39□□□□□ -2.47
SGCEO43556 RNA5SP457-201ENST00000363657 124 ntBASIC-0.39□□□□□ -2.47
SGCEO43556 RNU6-593P-201ENST00000364716 112 ntBASIC-0.39□□□□□ -2.47
SGCEO43556 RNU6-46P-201ENST00000383860 107 ntBASIC-0.39□□□□□ -2.47
SGCEO43556 RNU6-601P-201ENST00000384540 107 ntBASIC-0.39□□□□□ -2.47
SGCEO43556 MT-TF-201ENST00000387314 71 ntBASIC-0.39□□□□□ -2.47
SGCEO43556 MTND4P28-201ENST00000426217 387 ntBASIC-0.39□□□□□ -2.47
SGCEO43556 RNU6-1314P-201ENST00000517139 104 ntBASIC-0.39□□□□□ -2.47
SGCEO43556 MTND3P12-201ENST00000559068 328 ntBASIC-0.39□□□□□ -2.47
SGCEO43556 AC005899.2-201ENST00000584353 90 ntBASIC-0.39□□□□□ -2.47
SGCEO43556 Z99129.1-201ENST00000612510 255 ntBASIC-0.39□□□□□ -2.47
SGCEO43556 AC024614.3-201ENST00000637860 256 ntBASIC-0.39□□□□□ -2.47
SGCEO43556 SNORA18.1-201ENST00000363418 128 ntBASIC-0.4□□□□□ -2.47
SGCEO43556 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.4□□□□□ -2.47
SGCEO43556 RNU6-926P-201ENST00000384075 107 ntBASIC-0.4□□□□□ -2.47
SGCEO43556 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.4□□□□□ -2.47
SGCEO43556 RNU6-831P-201ENST00000384548 107 ntBASIC-0.4□□□□□ -2.47
SGCEO43556 Y_RNA.594-201ENST00000410373 140 ntBASIC-0.4□□□□□ -2.47
SGCEO43556 RNU6-1050P-201ENST00000410388 107 ntBASIC-0.4□□□□□ -2.47
SGCEO43556 MCFD2P1-201ENST00000417812 300 ntBASIC-0.4□□□□□ -2.47
SGCEO43556 snoU13.2-201ENST00000459201 104 ntBASIC-0.4□□□□□ -2.47
SGCEO43556 MIR2053-201ENST00000459295 91 ntBASIC-0.4□□□□□ -2.47
SGCEO43556 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.4□□□□□ -2.47
SGCEO43556 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms