Protein–RNA interactions for Protein: O43542

XRCC3, DNA repair protein XRCC3, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3O43542 RNU6-327P-201ENST00000516270 127 ntBASIC1.23□□□□□ -2.21
XRCC3O43542 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.23□□□□□ -2.21
XRCC3O43542 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.23□□□□□ -2.21
XRCC3O43542 AL161722.3-201ENST00000605789 2983 ntBASIC1.23□□□□□ -2.21
XRCC3O43542 AL021707.8-201ENST00000609428 183 ntBASIC1.23□□□□□ -2.21
XRCC3O43542 Y_RNA.47-201ENST00000362697 108 ntBASIC1.22□□□□□ -2.21
XRCC3O43542 U8.1-201ENST00000362843 134 ntBASIC1.22□□□□□ -2.21
XRCC3O43542 Y_RNA.242-201ENST00000364473 110 ntBASIC1.22□□□□□ -2.21
XRCC3O43542 RNU6-442P-201ENST00000383968 104 ntBASIC1.22□□□□□ -2.21
XRCC3O43542 RNU6-1289P-201ENST00000384431 106 ntBASIC1.22□□□□□ -2.21
XRCC3O43542 MIR15B-201ENST00000385045 98 ntBASIC1.22□□□□□ -2.21
XRCC3O43542 MIR516B2-201ENST00000385190 85 ntBASIC1.22□□□□□ -2.21
XRCC3O43542 RNA5SP496-201ENST00000391240 109 ntBASIC1.22□□□□□ -2.21
XRCC3O43542 AL078595.1-201ENST00000404458 226 ntBASIC1.22□□□□□ -2.21
XRCC3O43542 RNU6-383P-201ENST00000410864 94 ntBASIC1.22□□□□□ -2.21
XRCC3O43542 RNU6-321P-201ENST00000410912 106 ntBASIC1.22□□□□□ -2.21
XRCC3O43542 SNRPGP14-201ENST00000435400 219 ntBASIC1.22□□□□□ -2.21
XRCC3O43542 MIR4724-201ENST00000579485 89 ntBASIC1.22□□□□□ -2.21
XRCC3O43542 MIR5688-201ENST00000580619 83 ntBASIC1.22□□□□□ -2.21
XRCC3O43542 U2.14-201ENST00000615943 113 ntBASIC1.22□□□□□ -2.21
XRCC3O43542 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.21□□□□□ -2.22
XRCC3O43542 Y_RNA.149-201ENST00000363558 117 ntBASIC1.21□□□□□ -2.22
XRCC3O43542 Y_RNA.162-201ENST00000363683 102 ntBASIC1.21□□□□□ -2.22
XRCC3O43542 Y_RNA.293-201ENST00000364908 93 ntBASIC1.21□□□□□ -2.22
XRCC3O43542 SNORA25.9-201ENST00000365087 128 ntBASIC1.21□□□□□ -2.22
XRCC3O43542 RNU6-211P-201ENST00000384047 107 ntBASIC1.21□□□□□ -2.22
XRCC3O43542 MIR526A2-201ENST00000390198 65 ntBASIC1.21□□□□□ -2.22
XRCC3O43542 MIR758-201ENST00000390227 88 ntBASIC1.21□□□□□ -2.22
XRCC3O43542 MTND2P23-201ENST00000422990 651 ntBASIC1.21□□□□□ -2.22
XRCC3O43542 RPL39P39-201ENST00000455840 151 ntBASIC1.21□□□□□ -2.22
XRCC3O43542 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.21□□□□□ -2.22
XRCC3O43542 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.21□□□□□ -2.22
XRCC3O43542 MIR4303-201ENST00000581299 66 ntBASIC1.21□□□□□ -2.22
XRCC3O43542 AL359821.1-201ENST00000605519 182 ntBASIC1.21□□□□□ -2.22
XRCC3O43542 AL512598.1-201ENST00000610158 273 ntBASIC1.21□□□□□ -2.22
XRCC3O43542 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
XRCC3O43542 Y_RNA.14-201ENST00000362415 103 ntBASIC1.2□□□□□ -2.22
XRCC3O43542 RNA5SP327-201ENST00000362494 101 ntBASIC1.2□□□□□ -2.22
XRCC3O43542 RNU6-1309P-201ENST00000363305 108 ntBASIC1.2□□□□□ -2.22
XRCC3O43542 Y_RNA.133-201ENST00000363428 110 ntBASIC1.2□□□□□ -2.22
XRCC3O43542 RNU6-268P-201ENST00000364174 107 ntBASIC1.2□□□□□ -2.22
XRCC3O43542 RNU6-740P-201ENST00000364734 105 ntBASIC1.2□□□□□ -2.22
XRCC3O43542 MIR499A-201ENST00000384903 122 ntBASIC1.2□□□□□ -2.22
XRCC3O43542 AL603910.2-201ENST00000407268 136 ntBASIC1.2□□□□□ -2.22
XRCC3O43542 MIR1323-201ENST00000408090 73 ntBASIC1.2□□□□□ -2.22
XRCC3O43542 AL354695.1-201ENST00000427935 228 ntBASIC1.2□□□□□ -2.22
XRCC3O43542 SNRPGP13-201ENST00000442212 177 ntBASIC1.2□□□□□ -2.22
XRCC3O43542 AC023449.1-201ENST00000454464 154 ntBASIC1.2□□□□□ -2.22
XRCC3O43542 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.2□□□□□ -2.22
XRCC3O43542 MTCO2P24-201ENST00000515611 426 ntBASIC1.2□□□□□ -2.22
XRCC3O43542 RNU6-947P-201ENST00000516264 106 ntBASIC1.2□□□□□ -2.22
XRCC3O43542 RNU6-1045P-201ENST00000516321 107 ntBASIC1.2□□□□□ -2.22
XRCC3O43542 RNU6-830P-201ENST00000516353 107 ntBASIC1.2□□□□□ -2.22
XRCC3O43542 RNU1-92P-201ENST00000517017 135 ntBASIC1.2□□□□□ -2.22
XRCC3O43542 SNORA74.3-201ENST00000517108 154 ntBASIC1.2□□□□□ -2.22
XRCC3O43542 AL160236.1-201ENST00000556317 195 ntBASIC1.2□□□□□ -2.22
XRCC3O43542 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.2□□□□□ -2.22
XRCC3O43542 SNORD53B-201ENST00000577887 78 ntBASIC1.2□□□□□ -2.22
XRCC3O43542 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.2□□□□□ -2.22
XRCC3O43542 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.2□□□□□ -2.22
XRCC3O43542 MIR367-201ENST00000362299 68 ntBASIC1.19□□□□□ -2.22
XRCC3O43542 Y_RNA.82-201ENST00000363000 102 ntBASIC1.19□□□□□ -2.22
XRCC3O43542 Y_RNA.92-201ENST00000363043 102 ntBASIC1.19□□□□□ -2.22
XRCC3O43542 RNY1P10-201ENST00000363268 113 ntBASIC1.19□□□□□ -2.22
XRCC3O43542 Y_RNA.117-201ENST00000363294 101 ntBASIC1.19□□□□□ -2.22
XRCC3O43542 Y_RNA.122-201ENST00000363331 96 ntBASIC1.19□□□□□ -2.22
XRCC3O43542 Y_RNA.235-201ENST00000364412 102 ntBASIC1.19□□□□□ -2.22
XRCC3O43542 Y_RNA.306-201ENST00000365015 102 ntBASIC1.19□□□□□ -2.22
XRCC3O43542 Y_RNA.312-201ENST00000365089 102 ntBASIC1.19□□□□□ -2.22
XRCC3O43542 Y_RNA.322-201ENST00000365151 102 ntBASIC1.19□□□□□ -2.22
XRCC3O43542 Y_RNA.396-201ENST00000383949 103 ntBASIC1.19□□□□□ -2.22
XRCC3O43542 SNORD38C-201ENST00000384381 69 ntBASIC1.19□□□□□ -2.22
XRCC3O43542 MIR802-201ENST00000390235 94 ntBASIC1.19□□□□□ -2.22
XRCC3O43542 SNORD72-201ENST00000390994 80 ntBASIC1.19□□□□□ -2.22
XRCC3O43542 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.19□□□□□ -2.22
XRCC3O43542 AP1B1P2-201ENST00000416196 106 ntBASIC1.19□□□□□ -2.22
XRCC3O43542 AC009474.2-201ENST00000451383 136 ntBASIC1.19□□□□□ -2.22
XRCC3O43542 SNORD2.1-201ENST00000458762 69 ntBASIC1.19□□□□□ -2.22
XRCC3O43542 Y_RNA.650-201ENST00000459002 102 ntBASIC1.19□□□□□ -2.22
XRCC3O43542 Y_RNA.777-201ENST00000516982 102 ntBASIC1.19□□□□□ -2.22
XRCC3O43542 SNORA31.24-201ENST00000517232 57 ntBASIC1.19□□□□□ -2.22
XRCC3O43542 MIR3683-201ENST00000580847 82 ntBASIC1.19□□□□□ -2.22
XRCC3O43542 Y_RNA.771-201ENST00000598668 102 ntBASIC1.19□□□□□ -2.22
XRCC3O43542 Y_RNA.802-201ENST00000614892 130 ntBASIC1.19□□□□□ -2.22
XRCC3O43542 uc_338.4-201ENST00000616635 176 ntBASIC1.19□□□□□ -2.22
XRCC3O43542 Y_RNA.789-201ENST00000622480 102 ntBASIC1.19□□□□□ -2.22
XRCC3O43542 MIR26B-201ENST00000362251 77 ntBASIC1.18□□□□□ -2.22
XRCC3O43542 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.18□□□□□ -2.22
XRCC3O43542 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.18□□□□□ -2.22
XRCC3O43542 AC245047.7-201ENST00000440265 293 ntBASIC1.18□□□□□ -2.22
XRCC3O43542 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.18□□□□□ -2.22
XRCC3O43542 AC048334.1-201ENST00000477975 159 ntBASIC1.18□□□□□ -2.22
XRCC3O43542 SNORA31.2-201ENST00000516019 134 ntBASIC1.18□□□□□ -2.22
XRCC3O43542 SNORD111.1-201ENST00000516421 86 ntBASIC1.18□□□□□ -2.22
XRCC3O43542 DNAJC19P9-201ENST00000555084 351 ntBASIC1.18□□□□□ -2.22
XRCC3O43542 MIR4282-201ENST00000583613 67 ntBASIC1.18□□□□□ -2.22
XRCC3O43542 AL096861.1-201ENST00000610899 123 ntBASIC1.18□□□□□ -2.22
XRCC3O43542 AC006441.5-201ENST00000612680 209 ntBASIC1.18□□□□□ -2.22
XRCC3O43542 MIR8070-201ENST00000616510 88 ntBASIC1.18□□□□□ -2.22
XRCC3O43542 Y_RNA.224-201ENST00000364308 111 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms