Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC104435.1-201ENST00000483483 166 ntBASIC2.11□□□□□ -2.07
PROM1O43490 NDUFA4P2-201ENST00000489989 244 ntBASIC2.11□□□□□ -2.07
PROM1O43490 AC079804.2-201ENST00000490376 200 ntBASIC2.11□□□□□ -2.07
PROM1O43490 RNA5SP153-201ENST00000516498 76 ntBASIC2.11□□□□□ -2.07
PROM1O43490 Y_RNA.714-201ENST00000517065 90 ntBASIC2.11□□□□□ -2.07
PROM1O43490 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.11□□□□□ -2.07
PROM1O43490 MIR5094-201ENST00000578766 85 ntBASIC2.11□□□□□ -2.07
PROM1O43490 MIR4662B-201ENST00000579498 81 ntBASIC2.11□□□□□ -2.07
PROM1O43490 MIR548AI-201ENST00000579940 88 ntBASIC2.11□□□□□ -2.07
PROM1O43490 AL096840.1-201ENST00000603287 93 ntBASIC2.11□□□□□ -2.07
PROM1O43490 AC069114.2-201ENST00000604699 304 ntBASIC2.11□□□□□ -2.07
PROM1O43490 MIR6132-201ENST00000622083 109 ntBASIC2.11□□□□□ -2.07
PROM1O43490 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
PROM1O43490 SNORD113-1-201ENST00000365321 69 ntBASIC2.1□□□□□ -2.07
PROM1O43490 Y_RNA.486-201ENST00000384398 107 ntBASIC2.1□□□□□ -2.07
PROM1O43490 RNA5SP109-201ENST00000391010 116 ntBASIC2.1□□□□□ -2.07
PROM1O43490 RNA5SP465-201ENST00000391195 109 ntBASIC2.1□□□□□ -2.07
PROM1O43490 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.1□□□□□ -2.07
PROM1O43490 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.1□□□□□ -2.07
PROM1O43490 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.1□□□□□ -2.07
PROM1O43490 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.1□□□□□ -2.07
PROM1O43490 MRPS17P9-201ENST00000511924 393 ntBASIC2.1□□□□□ -2.07
PROM1O43490 RNA5SP200-201ENST00000516360 103 ntBASIC2.1□□□□□ -2.07
PROM1O43490 AL358944.1-201ENST00000528537 144 ntBASIC2.1□□□□□ -2.07
PROM1O43490 AL160236.1-201ENST00000556317 195 ntBASIC2.1□□□□□ -2.07
PROM1O43490 AC022513.1-201ENST00000624512 117 ntBASIC2.1□□□□□ -2.07
PROM1O43490 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
PROM1O43490 Y_RNA.265-201ENST00000364677 108 ntBASIC2.09□□□□□ -2.07
PROM1O43490 Y_RNA.291-201ENST00000364886 113 ntBASIC2.09□□□□□ -2.07
PROM1O43490 RNU6-1138P-201ENST00000365359 106 ntBASIC2.09□□□□□ -2.07
PROM1O43490 RNU6-597P-201ENST00000365620 102 ntBASIC2.09□□□□□ -2.07
PROM1O43490 RNU6-959P-201ENST00000384671 107 ntBASIC2.09□□□□□ -2.07
PROM1O43490 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
PROM1O43490 MTND4LP9-201ENST00000427694 174 ntBASIC2.09□□□□□ -2.07
PROM1O43490 AC245047.4-201ENST00000433189 144 ntBASIC2.09□□□□□ -2.07
PROM1O43490 AL606517.2-201ENST00000442855 241 ntBASIC2.09□□□□□ -2.07
PROM1O43490 AC092991.1-201ENST00000477176 376 ntBASIC2.09□□□□□ -2.07
PROM1O43490 RNU6-126P-201ENST00000516685 103 ntBASIC2.09□□□□□ -2.07
PROM1O43490 RNU6-365P-201ENST00000517113 106 ntBASIC2.09□□□□□ -2.07
PROM1O43490 AL353997.5-201ENST00000618886 171 ntBASIC2.09□□□□□ -2.07
PROM1O43490 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
PROM1O43490 RNU6-978P-201ENST00000364371 103 ntBASIC2.08□□□□□ -2.08
PROM1O43490 RNU6-1081P-201ENST00000384537 107 ntBASIC2.08□□□□□ -2.08
PROM1O43490 Y_RNA.542-201ENST00000384641 111 ntBASIC2.08□□□□□ -2.08
PROM1O43490 SNORD72-201ENST00000390994 80 ntBASIC2.08□□□□□ -2.08
PROM1O43490 RNA5SP247-201ENST00000411181 105 ntBASIC2.08□□□□□ -2.08
PROM1O43490 RNU6-1211P-201ENST00000459179 105 ntBASIC2.08□□□□□ -2.08
PROM1O43490 RNU6-971P-201ENST00000516920 106 ntBASIC2.08□□□□□ -2.08
PROM1O43490 AC011603.4-201ENST00000611325 277 ntBASIC2.08□□□□□ -2.08
PROM1O43490 RNU6-1084P-201ENST00000362498 107 ntBASIC2.07□□□□□ -2.08
PROM1O43490 RNY1P11-201ENST00000363759 113 ntBASIC2.07□□□□□ -2.08
PROM1O43490 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
PROM1O43490 RNU7-197P-201ENST00000458836 62 ntBASIC2.07□□□□□ -2.08
PROM1O43490 RNU6-62P-201ENST00000516526 102 ntBASIC2.07□□□□□ -2.08
PROM1O43490 AP001328.1-201ENST00000528550 176 ntBASIC2.07□□□□□ -2.08
PROM1O43490 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.07□□□□□ -2.08
PROM1O43490 AC084364.2-201ENST00000546924 395 ntBASIC2.07□□□□□ -2.08
PROM1O43490 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.07□□□□□ -2.08
PROM1O43490 AP000553.5-201ENST00000641933 54 ntBASIC2.07□□□□□ -2.08
PROM1O43490 RNU6-1019P-201ENST00000364424 107 ntBASIC2.06□□□□□ -2.08
PROM1O43490 RNU4-52P-201ENST00000384209 138 ntBASIC2.06□□□□□ -2.08
PROM1O43490 MIR522-201ENST00000385071 87 ntBASIC2.06□□□□□ -2.08
PROM1O43490 Y_RNA.584-201ENST00000391090 114 ntBASIC2.06□□□□□ -2.08
PROM1O43490 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.06□□□□□ -2.08
PROM1O43490 STAG3L5P-204ENST00000443759 179 ntBASIC2.06□□□□□ -2.08
PROM1O43490 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.06□□□□□ -2.08
PROM1O43490 RNA5SP458-201ENST00000516188 119 ntBASIC2.06□□□□□ -2.08
PROM1O43490 AC008507.4-201ENST00000585464 127 ntBASIC2.06□□□□□ -2.08
PROM1O43490 AL773524.1-201ENST00000614065 229 ntBASIC2.06□□□□□ -2.08
PROM1O43490 AL359851.1-201ENST00000569460 4997 ntBASIC2.06□□□□□ -2.08
PROM1O43490 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.05□□□□□ -2.08
PROM1O43490 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
PROM1O43490 RNU6-915P-201ENST00000364943 103 ntBASIC2.05□□□□□ -2.08
PROM1O43490 RNU6-22P-201ENST00000384355 107 ntBASIC2.05□□□□□ -2.08
PROM1O43490 MIR1283-2-201ENST00000408621 87 ntBASIC2.05□□□□□ -2.08
PROM1O43490 SNORA18.4-201ENST00000516440 124 ntBASIC2.05□□□□□ -2.08
PROM1O43490 RNU6-504P-201ENST00000516568 104 ntBASIC2.05□□□□□ -2.08
PROM1O43490 SCARNA16.3-201ENST00000516595 184 ntBASIC2.05□□□□□ -2.08
PROM1O43490 RNU6-1270P-201ENST00000517128 108 ntBASIC2.05□□□□□ -2.08
PROM1O43490 MIR4299-201ENST00000577899 72 ntBASIC2.05□□□□□ -2.08
PROM1O43490 AC087685.1-201ENST00000587507 141 ntBASIC2.05□□□□□ -2.08
PROM1O43490 AC097639.2-201ENST00000603159 172 ntBASIC2.05□□□□□ -2.08
PROM1O43490 TUG1_4.1-201ENST00000619464 181 ntBASIC2.05□□□□□ -2.08
PROM1O43490 MIR6873-201ENST00000622788 63 ntBASIC2.05□□□□□ -2.08
PROM1O43490 AC092881.1-201ENST00000638218 2733 ntBASIC2.05□□□□□ -2.08
PROM1O43490 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.04□□□□□ -2.08
PROM1O43490 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
PROM1O43490 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
PROM1O43490 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
PROM1O43490 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
PROM1O43490 RNA5SP276-201ENST00000362580 94 ntBASIC2.04□□□□□ -2.08
PROM1O43490 Y_RNA.242-201ENST00000364473 110 ntBASIC2.04□□□□□ -2.08
PROM1O43490 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.04□□□□□ -2.08
PROM1O43490 RNU6-440P-201ENST00000390882 105 ntBASIC2.04□□□□□ -2.08
PROM1O43490 RNU6-1154P-201ENST00000391001 104 ntBASIC2.04□□□□□ -2.08
PROM1O43490 RNA5SP482-201ENST00000391269 118 ntBASIC2.04□□□□□ -2.08
PROM1O43490 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.04□□□□□ -2.08
PROM1O43490 FTH1P12-201ENST00000432137 551 ntBASIC2.04□□□□□ -2.08
PROM1O43490 AC069257.2-201ENST00000441819 155 ntBASIC2.04□□□□□ -2.08
PROM1O43490 Y_RNA.666-201ENST00000516187 112 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms