Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 RNU6-1084P-201ENST00000362498 107 ntBASIC1.93□□□□□ -2.1
PRPF3O43395 RNU6-199P-201ENST00000362954 107 ntBASIC1.93□□□□□ -2.1
PRPF3O43395 RNY4P28-201ENST00000365281 93 ntBASIC1.93□□□□□ -2.1
PRPF3O43395 MIR452-201ENST00000385020 85 ntBASIC1.93□□□□□ -2.1
PRPF3O43395 MIR15B-201ENST00000385045 98 ntBASIC1.93□□□□□ -2.1
PRPF3O43395 U8.16-201ENST00000391279 133 ntBASIC1.93□□□□□ -2.1
PRPF3O43395 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.93□□□□□ -2.1
PRPF3O43395 RNU6-322P-201ENST00000516010 103 ntBASIC1.93□□□□□ -2.1
PRPF3O43395 CBX3P4-201ENST00000538909 354 ntBASIC1.93□□□□□ -2.1
PRPF3O43395 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.93□□□□□ -2.1
PRPF3O43395 AC095038.3-201ENST00000634439 195 ntBASIC1.93□□□□□ -2.1
PRPF3O43395 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
PRPF3O43395 Y_RNA.24-201ENST00000362508 103 ntBASIC1.92□□□□□ -2.1
PRPF3O43395 Y_RNA.164-201ENST00000363709 102 ntBASIC1.92□□□□□ -2.1
PRPF3O43395 RNY1-201ENST00000364228 113 ntBASIC1.92□□□□□ -2.1
PRPF3O43395 SNORA2.2-201ENST00000365473 135 ntBASIC1.92□□□□□ -2.1
PRPF3O43395 MIR626-201ENST00000385032 94 ntBASIC1.92□□□□□ -2.1
PRPF3O43395 SNX2P2-201ENST00000424553 323 ntBASIC1.92□□□□□ -2.1
PRPF3O43395 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.92□□□□□ -2.1
PRPF3O43395 RNA5SP445-201ENST00000515889 115 ntBASIC1.92□□□□□ -2.1
PRPF3O43395 RNU6-388P-201ENST00000517012 105 ntBASIC1.92□□□□□ -2.1
PRPF3O43395 RNU6-389P-201ENST00000517048 105 ntBASIC1.92□□□□□ -2.1
PRPF3O43395 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.92□□□□□ -2.1
PRPF3O43395 AL513534.2-201ENST00000603836 250 ntBASIC1.92□□□□□ -2.1
PRPF3O43395 MIR502-201ENST00000606349 86 ntBASIC1.92□□□□□ -2.1
PRPF3O43395 MIR8063-201ENST00000621930 81 ntBASIC1.92□□□□□ -2.1
PRPF3O43395 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
PRPF3O43395 SNORD1A-201ENST00000364968 72 ntBASIC1.91□□□□□ -2.1
PRPF3O43395 RNA5SP259-201ENST00000365541 109 ntBASIC1.91□□□□□ -2.1
PRPF3O43395 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.91□□□□□ -2.1
PRPF3O43395 COX6CP14-201ENST00000469580 174 ntBASIC1.91□□□□□ -2.1
PRPF3O43395 RPL30P7-201ENST00000479312 323 ntBASIC1.91□□□□□ -2.1
PRPF3O43395 SNORA25.15-201ENST00000516487 89 ntBASIC1.91□□□□□ -2.1
PRPF3O43395 AC078938.1-201ENST00000620993 318 ntBASIC1.91□□□□□ -2.1
PRPF3O43395 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.91□□□□□ -2.1
PRPF3O43395 RNU6-653P-201ENST00000363074 106 ntBASIC1.9□□□□□ -2.11
PRPF3O43395 Y_RNA.552-201ENST00000384665 112 ntBASIC1.9□□□□□ -2.11
PRPF3O43395 Y_RNA.572-201ENST00000384757 98 ntBASIC1.9□□□□□ -2.11
PRPF3O43395 Y_RNA.626-201ENST00000411288 95 ntBASIC1.9□□□□□ -2.11
PRPF3O43395 RN7SKP101-201ENST00000411376 320 ntBASIC1.9□□□□□ -2.11
PRPF3O43395 AC027119.1-201ENST00000440877 241 ntBASIC1.9□□□□□ -2.11
PRPF3O43395 SNORD11-201ENST00000459124 84 ntBASIC1.9□□□□□ -2.11
PRPF3O43395 RNU6-1116P-201ENST00000517269 99 ntBASIC1.9□□□□□ -2.11
PRPF3O43395 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.9□□□□□ -2.11
PRPF3O43395 MIR4662B-201ENST00000579498 81 ntBASIC1.9□□□□□ -2.11
PRPF3O43395 AC141273.2-201ENST00000618989 130 ntBASIC1.9□□□□□ -2.11
PRPF3O43395 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
PRPF3O43395 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PRPF3O43395 RNU1-17P-201ENST00000363022 152 ntBASIC1.89□□□□□ -2.11
PRPF3O43395 SNORD14E-201ENST00000364009 85 ntBASIC1.89□□□□□ -2.11
PRPF3O43395 Y_RNA.515-201ENST00000384535 112 ntBASIC1.89□□□□□ -2.11
PRPF3O43395 MIR802-201ENST00000390235 94 ntBASIC1.89□□□□□ -2.11
PRPF3O43395 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.89□□□□□ -2.11
PRPF3O43395 MIR1298-201ENST00000408783 112 ntBASIC1.89□□□□□ -2.11
PRPF3O43395 RN7SKP51-201ENST00000410781 304 ntBASIC1.89□□□□□ -2.11
PRPF3O43395 PIGPP3-201ENST00000425307 415 ntBASIC1.89□□□□□ -2.11
PRPF3O43395 AC005908.1-201ENST00000468701 347 ntBASIC1.89□□□□□ -2.11
PRPF3O43395 SNORD45.4-201ENST00000516629 73 ntBASIC1.89□□□□□ -2.11
PRPF3O43395 AC009779.6-201ENST00000603972 165 ntBASIC1.89□□□□□ -2.11
PRPF3O43395 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
PRPF3O43395 MIR337-201ENST00000362281 93 ntBASIC1.88□□□□□ -2.11
PRPF3O43395 Y_RNA.199-201ENST00000364014 102 ntBASIC1.88□□□□□ -2.11
PRPF3O43395 Y_RNA.200-201ENST00000364018 102 ntBASIC1.88□□□□□ -2.11
PRPF3O43395 Y_RNA.226-201ENST00000364337 114 ntBASIC1.88□□□□□ -2.11
PRPF3O43395 Y_RNA.229-201ENST00000364347 113 ntBASIC1.88□□□□□ -2.11
PRPF3O43395 RNU4-17P-201ENST00000365598 141 ntBASIC1.88□□□□□ -2.11
PRPF3O43395 RNU6-442P-201ENST00000383968 104 ntBASIC1.88□□□□□ -2.11
PRPF3O43395 MIR653-201ENST00000385279 96 ntBASIC1.88□□□□□ -2.11
PRPF3O43395 RPL31P63-201ENST00000422565 375 ntBASIC1.88□□□□□ -2.11
PRPF3O43395 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.88□□□□□ -2.11
PRPF3O43395 NDUFA4P2-201ENST00000489989 244 ntBASIC1.88□□□□□ -2.11
PRPF3O43395 RNY3P16-201ENST00000516338 101 ntBASIC1.88□□□□□ -2.11
PRPF3O43395 SUMO2P16-201ENST00000519475 264 ntBASIC1.88□□□□□ -2.11
PRPF3O43395 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.88□□□□□ -2.11
PRPF3O43395 AC090049.2-201ENST00000550377 109 ntBASIC1.88□□□□□ -2.11
PRPF3O43395 MIR4778-201ENST00000577635 80 ntBASIC1.88□□□□□ -2.11
PRPF3O43395 AL357312.1-201ENST00000603879 298 ntBASIC1.88□□□□□ -2.11
PRPF3O43395 AL021707.8-201ENST00000609428 183 ntBASIC1.88□□□□□ -2.11
PRPF3O43395 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.88□□□□□ -2.11
PRPF3O43395 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
PRPF3O43395 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
PRPF3O43395 Y_RNA.308-201ENST00000365043 101 ntBASIC1.87□□□□□ -2.11
PRPF3O43395 RNY3P5-201ENST00000384127 102 ntBASIC1.87□□□□□ -2.11
PRPF3O43395 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.87□□□□□ -2.11
PRPF3O43395 AC114811.1-201ENST00000507207 168 ntBASIC1.87□□□□□ -2.11
PRPF3O43395 RNU6-902P-201ENST00000517212 91 ntBASIC1.87□□□□□ -2.11
PRPF3O43395 MIR3937-201ENST00000580135 106 ntBASIC1.87□□□□□ -2.11
PRPF3O43395 MIR4285-201ENST00000581001 85 ntBASIC1.87□□□□□ -2.11
PRPF3O43395 AL049861.1-201ENST00000603130 150 ntBASIC1.87□□□□□ -2.11
PRPF3O43395 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.87□□□□□ -2.11
PRPF3O43395 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
PRPF3O43395 Y_RNA.83-201ENST00000363005 113 ntBASIC1.86□□□□□ -2.11
PRPF3O43395 RNU6-381P-201ENST00000391259 108 ntBASIC1.86□□□□□ -2.11
PRPF3O43395 AL451046.2-201ENST00000403074 277 ntBASIC1.86□□□□□ -2.11
PRPF3O43395 AC130289.1-201ENST00000577321 73 ntBASIC1.86□□□□□ -2.11
PRPF3O43395 snoU13.31-201ENST00000607291 104 ntBASIC1.86□□□□□ -2.11
PRPF3O43395 uc_338.4-201ENST00000616635 176 ntBASIC1.86□□□□□ -2.11
PRPF3O43395 AL121890.5-201ENST00000620848 304 ntBASIC1.86□□□□□ -2.11
PRPF3O43395 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
PRPF3O43395 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms