Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL512326.2-201ENST00000426359 151 ntBASIC-0.28□□□□□ -2.45
SDCBPO00560 AC236972.2-201ENST00000434979 310 ntBASIC-0.28□□□□□ -2.45
SDCBPO00560 SUMO1P3-201ENST00000439961 304 ntBASIC-0.28□□□□□ -2.45
SDCBPO00560 RNU6-155P-201ENST00000516347 100 ntBASIC-0.28□□□□□ -2.45
SDCBPO00560 RNU6-566P-201ENST00000516790 107 ntBASIC-0.28□□□□□ -2.45
SDCBPO00560 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.28□□□□□ -2.45
SDCBPO00560 POLR3GP1-201ENST00000594073 261 ntBASIC-0.28□□□□□ -2.45
SDCBPO00560 MIR8066-201ENST00000617280 78 ntBASIC-0.28□□□□□ -2.45
SDCBPO00560 MIR6828-201ENST00000636181 60 ntBASIC-0.28□□□□□ -2.45
SDCBPO00560 MIR3662-201ENST00000637030 95 ntBASIC-0.28□□□□□ -2.45
SDCBPO00560 AC024614.3-201ENST00000637860 256 ntBASIC-0.28□□□□□ -2.45
SDCBPO00560 MIR30D-201ENST00000362283 70 ntBASIC-0.29□□□□□ -2.46
SDCBPO00560 SNORA63C-201ENST00000364578 129 ntBASIC-0.29□□□□□ -2.46
SDCBPO00560 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.29□□□□□ -2.46
SDCBPO00560 RNU6-302P-201ENST00000365249 107 ntBASIC-0.29□□□□□ -2.46
SDCBPO00560 MIR563-201ENST00000385080 79 ntBASIC-0.29□□□□□ -2.46
SDCBPO00560 HMGN1P33-201ENST00000432945 451 ntBASIC-0.29□□□□□ -2.46
SDCBPO00560 snoU13.2-201ENST00000459201 104 ntBASIC-0.29□□□□□ -2.46
SDCBPO00560 AC024405.2-202ENST00000532731 184 ntBASIC-0.29□□□□□ -2.46
SDCBPO00560 NBR2-204ENST00000587322 63 ntBASIC-0.29□□□□□ -2.46
SDCBPO00560 RNU1-29P-201ENST00000606574 126 ntBASIC-0.29□□□□□ -2.46
SDCBPO00560 MIR8055-201ENST00000610739 97 ntBASIC-0.29□□□□□ -2.46
SDCBPO00560 MIR1244-1-201ENST00000612829 85 ntBASIC-0.29□□□□□ -2.46
SDCBPO00560 JPX_2.1-201ENST00000614161 69 ntBASIC-0.29□□□□□ -2.46
SDCBPO00560 MIR1244-3-201ENST00000635744 85 ntBASIC-0.29□□□□□ -2.46
SDCBPO00560 MIR1244-2-201ENST00000636449 85 ntBASIC-0.29□□□□□ -2.46
SDCBPO00560 MIR1244-4-202ENST00000636813 85 ntBASIC-0.29□□□□□ -2.46
SDCBPO00560 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.3□□□□□ -2.46
SDCBPO00560 RNU6-740P-201ENST00000364734 105 ntBASIC-0.3□□□□□ -2.46
SDCBPO00560 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.3□□□□□ -2.46
SDCBPO00560 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.3□□□□□ -2.46
SDCBPO00560 RNA5SP128-201ENST00000365305 116 ntBASIC-0.3□□□□□ -2.46
SDCBPO00560 SNORD38B-201ENST00000384690 67 ntBASIC-0.3□□□□□ -2.46
SDCBPO00560 AL590004.1-201ENST00000405321 300 ntBASIC-0.3□□□□□ -2.46
SDCBPO00560 Y_RNA.594-201ENST00000410373 140 ntBASIC-0.3□□□□□ -2.46
SDCBPO00560 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-0.3□□□□□ -2.46
SDCBPO00560 RNU7-25P-201ENST00000516544 62 ntBASIC-0.3□□□□□ -2.46
SDCBPO00560 RNU6-504P-201ENST00000516568 104 ntBASIC-0.3□□□□□ -2.46
SDCBPO00560 RNU6-1314P-201ENST00000517139 104 ntBASIC-0.3□□□□□ -2.46
SDCBPO00560 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.3□□□□□ -2.46
SDCBPO00560 MIR4752-201ENST00000579672 72 ntBASIC-0.3□□□□□ -2.46
SDCBPO00560 MIR4305-201ENST00000583252 102 ntBASIC-0.3□□□□□ -2.46
SDCBPO00560 AP003357.1-201ENST00000604497 148 ntBASIC-0.3□□□□□ -2.46
SDCBPO00560 AC022306.2-201ENST00000617563 647 ntBASIC-0.3□□□□□ -2.46
SDCBPO00560 Z97988.1-201ENST00000637697 135 ntBASIC-0.3□□□□□ -2.46
SDCBPO00560 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.31□□□□□ -2.46
SDCBPO00560 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.31□□□□□ -2.46
SDCBPO00560 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.31□□□□□ -2.46
SDCBPO00560 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.31□□□□□ -2.46
SDCBPO00560 RNU6-1090P-201ENST00000364065 94 ntBASIC-0.31□□□□□ -2.46
SDCBPO00560 U8.7-201ENST00000364940 136 ntBASIC-0.31□□□□□ -2.46
SDCBPO00560 Y_RNA.301-201ENST00000364990 103 ntBASIC-0.31□□□□□ -2.46
SDCBPO00560 RNU6-20P-201ENST00000384106 107 ntBASIC-0.31□□□□□ -2.46
SDCBPO00560 RNU6-602P-201ENST00000411155 105 ntBASIC-0.31□□□□□ -2.46
SDCBPO00560 MCFD2P1-201ENST00000417812 300 ntBASIC-0.31□□□□□ -2.46
SDCBPO00560 AF228730.4-201ENST00000421457 183 ntBASIC-0.31□□□□□ -2.46
SDCBPO00560 Y_RNA.717-201ENST00000517106 92 ntBASIC-0.31□□□□□ -2.46
SDCBPO00560 AC127455.1-201ENST00000565496 145 ntBASIC-0.31□□□□□ -2.46
SDCBPO00560 MIR5188-201ENST00000583467 113 ntBASIC-0.31□□□□□ -2.46
SDCBPO00560 MIR4760-201ENST00000585040 80 ntBASIC-0.31□□□□□ -2.46
SDCBPO00560 AL355297.3-201ENST00000604082 446 ntBASIC-0.31□□□□□ -2.46
SDCBPO00560 Z99129.1-201ENST00000612510 255 ntBASIC-0.31□□□□□ -2.46
SDCBPO00560 MIR2909-201ENST00000617113 69 ntBASIC-0.31□□□□□ -2.46
SDCBPO00560 uc_338.22-201ENST00000622722 187 ntBASIC-0.31□□□□□ -2.46
SDCBPO00560 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.32□□□□□ -2.46
SDCBPO00560 RNU6-514P-201ENST00000384208 107 ntBASIC-0.32□□□□□ -2.46
SDCBPO00560 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.32□□□□□ -2.46
SDCBPO00560 AC074085.1-201ENST00000413598 418 ntBASIC-0.32□□□□□ -2.46
SDCBPO00560 RNU7-67P-201ENST00000459003 62 ntBASIC-0.32□□□□□ -2.46
SDCBPO00560 RPL39P34-201ENST00000477141 156 ntBASIC-0.32□□□□□ -2.46
SDCBPO00560 MTND5P5-201ENST00000503764 376 ntBASIC-0.32□□□□□ -2.46
SDCBPO00560 RNU6-469P-201ENST00000516253 101 ntBASIC-0.32□□□□□ -2.46
SDCBPO00560 RNU7-116P-201ENST00000516940 62 ntBASIC-0.32□□□□□ -2.46
SDCBPO00560 RNU6-958P-201ENST00000516995 106 ntBASIC-0.32□□□□□ -2.46
SDCBPO00560 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.32□□□□□ -2.46
SDCBPO00560 MIR3611-201ENST00000584484 83 ntBASIC-0.32□□□□□ -2.46
SDCBPO00560 AC005176.2-201ENST00000596933 147 ntBASIC-0.32□□□□□ -2.46
SDCBPO00560 Y_RNA.77-201ENST00000362962 107 ntBASIC-0.33□□□□□ -2.46
SDCBPO00560 RNU6-626P-201ENST00000363354 107 ntBASIC-0.33□□□□□ -2.46
SDCBPO00560 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.33□□□□□ -2.46
SDCBPO00560 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.33□□□□□ -2.46
SDCBPO00560 SNORD12C-201ENST00000386307 89 ntBASIC-0.33□□□□□ -2.46
SDCBPO00560 RNA5SP118-201ENST00000410385 109 ntBASIC-0.33□□□□□ -2.46
SDCBPO00560 FCF1P9-201ENST00000412546 282 ntBASIC-0.33□□□□□ -2.46
SDCBPO00560 MTND2P9-201ENST00000422293 931 ntBASIC-0.33□□□□□ -2.46
SDCBPO00560 SNORD11-201ENST00000459124 84 ntBASIC-0.33□□□□□ -2.46
SDCBPO00560 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.33□□□□□ -2.46
SDCBPO00560 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.33□□□□□ -2.46
SDCBPO00560 RNU7-115P-201ENST00000516433 55 ntBASIC-0.33□□□□□ -2.46
SDCBPO00560 SNORA31.14-201ENST00000516728 116 ntBASIC-0.33□□□□□ -2.46
SDCBPO00560 RNA5SP480-201ENST00000516840 109 ntBASIC-0.33□□□□□ -2.46
SDCBPO00560 RNU6-782P-201ENST00000516852 104 ntBASIC-0.33□□□□□ -2.46
SDCBPO00560 RNA5SP47-201ENST00000517230 109 ntBASIC-0.33□□□□□ -2.46
SDCBPO00560 MIR4790-201ENST00000577799 79 ntBASIC-0.33□□□□□ -2.46
SDCBPO00560 MIR4743-201ENST00000584576 69 ntBASIC-0.33□□□□□ -2.46
SDCBPO00560 RN7SKP299-201ENST00000606679 301 ntBASIC-0.33□□□□□ -2.46
SDCBPO00560 AC092794.2-201ENST00000620933 563 ntBASIC-0.33□□□□□ -2.46
SDCBPO00560 MIR1321-201ENST00000637766 79 ntBASIC-0.33□□□□□ -2.46
SDCBPO00560 RNU6-161P-201ENST00000363051 106 ntBASIC-0.34□□□□□ -2.46
SDCBPO00560 Y_RNA.404-201ENST00000383978 102 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms