Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 SNORD115-10-201ENST00000365073 81 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 SNORD115-43-201ENST00000365503 82 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 SNORD115-36-201ENST00000365629 82 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 RNU6-281P-201ENST00000384212 103 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 RNU6-933P-201ENST00000384424 107 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.44□□□□□ -2.64
HMGN4O00479 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 AC134698.4-201ENST00000523451 826 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 MTATP6P25-201ENST00000574491 261 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 MIR4280-201ENST00000582178 76 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 SNORD115-40-201ENST00000606510 82 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 AL391834.2-201ENST00000609982 546 ntBASIC-1.44□□□□□ -2.64
HMGN4O00479 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.45□□□□□ -2.64
HMGN4O00479 SNORA63.5-201ENST00000363548 123 ntBASIC-1.45□□□□□ -2.64
HMGN4O00479 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.45□□□□□ -2.64
HMGN4O00479 MTCO2P21-201ENST00000419780 677 ntBASIC-1.45□□□□□ -2.64
HMGN4O00479 RNU7-104P-201ENST00000459398 79 ntBASIC-1.45□□□□□ -2.64
HMGN4O00479 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.45□□□□□ -2.64
HMGN4O00479 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.45□□□□□ -2.64
HMGN4O00479 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.45□□□□□ -2.64
HMGN4O00479 RNU6-276P-201ENST00000516114 96 ntBASIC-1.45□□□□□ -2.64
HMGN4O00479 RNU6-966P-201ENST00000516479 104 ntBASIC-1.45□□□□□ -2.64
HMGN4O00479 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.45□□□□□ -2.64
HMGN4O00479 MIR3165-201ENST00000579874 75 ntBASIC-1.45□□□□□ -2.64
HMGN4O00479 MIR5583-1-201ENST00000580941 59 ntBASIC-1.45□□□□□ -2.64
HMGN4O00479 AC006566.1-201ENST00000608943 513 ntBASIC-1.45□□□□□ -2.64
HMGN4O00479 MIR6851-201ENST00000617060 67 ntBASIC-1.45□□□□□ -2.64
HMGN4O00479 MIR6086-201ENST00000638065 55 ntBASIC-1.45□□□□□ -2.64
HMGN4O00479 AL589826.1-201ENST00000340697 249 ntBASIC-1.46□□□□□ -2.64
HMGN4O00479 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.46□□□□□ -2.64
HMGN4O00479 RNU6-509P-201ENST00000363519 107 ntBASIC-1.46□□□□□ -2.64
HMGN4O00479 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.46□□□□□ -2.64
HMGN4O00479 AC096949.1-201ENST00000412047 152 ntBASIC-1.46□□□□□ -2.64
HMGN4O00479 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.46□□□□□ -2.64
HMGN4O00479 AC244505.6-201ENST00000452829 130 ntBASIC-1.46□□□□□ -2.64
HMGN4O00479 RNA5SP484-201ENST00000458857 111 ntBASIC-1.46□□□□□ -2.64
HMGN4O00479 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.46□□□□□ -2.64
HMGN4O00479 SNORA19.3-201ENST00000516165 130 ntBASIC-1.46□□□□□ -2.64
HMGN4O00479 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.46□□□□□ -2.64
HMGN4O00479 RNU7-53P-201ENST00000516705 60 ntBASIC-1.46□□□□□ -2.64
HMGN4O00479 AL662814.1-201ENST00000617364 121 ntBASIC-1.46□□□□□ -2.64
HMGN4O00479 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.46□□□□□ -2.64
HMGN4O00479 SNORD56B-201ENST00000384713 71 ntBASIC-1.47□□□□□ -2.64
HMGN4O00479 MIR3115-201ENST00000577915 68 ntBASIC-1.47□□□□□ -2.64
HMGN4O00479 AC008507.4-201ENST00000585464 127 ntBASIC-1.47□□□□□ -2.64
HMGN4O00479 AP001282.2-201ENST00000616149 309 ntBASIC-1.47□□□□□ -2.64
HMGN4O00479 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.48□□□□□ -2.65
HMGN4O00479 RNU6-865P-201ENST00000364772 107 ntBASIC-1.48□□□□□ -2.65
HMGN4O00479 RNU6-901P-201ENST00000384593 106 ntBASIC-1.48□□□□□ -2.65
HMGN4O00479 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.48□□□□□ -2.65
HMGN4O00479 USP9YP12-201ENST00000450481 570 ntBASIC-1.48□□□□□ -2.65
HMGN4O00479 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.48□□□□□ -2.65
HMGN4O00479 AC093023.1-201ENST00000547375 507 ntBASIC-1.48□□□□□ -2.65
HMGN4O00479 AL356055.1-201ENST00000602528 446 ntBASIC-1.48□□□□□ -2.65
HMGN4O00479 AP000942.4-201ENST00000604811 241 ntBASIC-1.48□□□□□ -2.65
HMGN4O00479 AL607023.1-201ENST00000620045 248 ntBASIC-1.48□□□□□ -2.65
HMGN4O00479 MIR3674-201ENST00000636576 68 ntBASIC-1.48□□□□□ -2.65
HMGN4O00479 RNA5SP403-201ENST00000363598 108 ntBASIC-1.49□□□□□ -2.65
HMGN4O00479 RNU6-501P-201ENST00000364072 100 ntBASIC-1.49□□□□□ -2.65
HMGN4O00479 RNU6-900P-201ENST00000384498 102 ntBASIC-1.49□□□□□ -2.65
HMGN4O00479 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.49□□□□□ -2.65
HMGN4O00479 RNU6-721P-201ENST00000410155 105 ntBASIC-1.49□□□□□ -2.65
HMGN4O00479 RNA5SP237-201ENST00000410414 113 ntBASIC-1.49□□□□□ -2.65
HMGN4O00479 RNA5SP475-201ENST00000410568 110 ntBASIC-1.49□□□□□ -2.65
HMGN4O00479 MTND2P9-201ENST00000422293 931 ntBASIC-1.49□□□□□ -2.65
HMGN4O00479 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.49□□□□□ -2.65
HMGN4O00479 USP9YP30-201ENST00000430729 455 ntBASIC-1.49□□□□□ -2.65
HMGN4O00479 SNORD38.3-201ENST00000516599 73 ntBASIC-1.49□□□□□ -2.65
HMGN4O00479 SNORA25.16-201ENST00000516741 121 ntBASIC-1.49□□□□□ -2.65
HMGN4O00479 RNY1P9-201ENST00000532431 109 ntBASIC-1.49□□□□□ -2.65
HMGN4O00479 Z84480.1-201ENST00000605131 311 ntBASIC-1.49□□□□□ -2.65
HMGN4O00479 AL133215.3-201ENST00000609801 448 ntBASIC-1.49□□□□□ -2.65
HMGN4O00479 TUSC7.1-201ENST00000610969 165 ntBASIC-1.49□□□□□ -2.65
HMGN4O00479 AL121757.2-201ENST00000611223 313 ntBASIC-1.49□□□□□ -2.65
HMGN4O00479 JPX_2.1-201ENST00000614161 69 ntBASIC-1.49□□□□□ -2.65
HMGN4O00479 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.5□□□□□ -2.65
HMGN4O00479 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.5□□□□□ -2.65
HMGN4O00479 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.5□□□□□ -2.65
HMGN4O00479 RNU6-903P-201ENST00000391270 109 ntBASIC-1.5□□□□□ -2.65
HMGN4O00479 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.5□□□□□ -2.65
HMGN4O00479 RNU6-1114P-201ENST00000516022 107 ntBASIC-1.5□□□□□ -2.65
HMGN4O00479 MIR4306-201ENST00000583390 91 ntBASIC-1.5□□□□□ -2.65
HMGN4O00479 RNU6-86P-201ENST00000606534 107 ntBASIC-1.5□□□□□ -2.65
HMGN4O00479 AC087683.2-201ENST00000611384 326 ntBASIC-1.5□□□□□ -2.65
HMGN4O00479 AC027807.2-201ENST00000616099 408 ntBASIC-1.5□□□□□ -2.65
HMGN4O00479 AC007671.2-201ENST00000637344 619 ntBASIC-1.5□□□□□ -2.65
HMGN4O00479 SNORD115-2-201ENST00000362842 82 ntBASIC-1.51□□□□□ -2.65
HMGN4O00479 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.51□□□□□ -2.65
HMGN4O00479 RNU6-767P-201ENST00000384132 107 ntBASIC-1.51□□□□□ -2.65
HMGN4O00479 MIR181B2-201ENST00000385004 89 ntBASIC-1.51□□□□□ -2.65
HMGN4O00479 MT-TY-201ENST00000387409 66 ntBASIC-1.51□□□□□ -2.65
HMGN4O00479 MTCO2P16-201ENST00000436962 677 ntBASIC-1.51□□□□□ -2.65
HMGN4O00479 UBE2D3P4-201ENST00000441973 436 ntBASIC-1.51□□□□□ -2.65
HMGN4O00479 AC040926.1-201ENST00000530195 238 ntBASIC-1.51□□□□□ -2.65
HMGN4O00479 MIR3179-1-201ENST00000578940 84 ntBASIC-1.51□□□□□ -2.65
HMGN4O00479 MIR3179-2-201ENST00000579107 84 ntBASIC-1.51□□□□□ -2.65
HMGN4O00479 MIR3179-3-201ENST00000579566 84 ntBASIC-1.51□□□□□ -2.65
HMGN4O00479 AC092807.2-201ENST00000609367 243 ntBASIC-1.51□□□□□ -2.65
HMGN4O00479 HULC.1-201ENST00000612720 240 ntBASIC-1.51□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms