Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC020891.4-201ENST00000605745 93 ntBASIC0.19□□□□□ -2.38
SMKR1H3BMG3 AC011373.1-201ENST00000607270 237 ntBASIC0.19□□□□□ -2.38
SMKR1H3BMG3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.18□□□□□ -2.38
SMKR1H3BMG3 RNU4-50P-201ENST00000364361 141 ntBASIC0.18□□□□□ -2.38
SMKR1H3BMG3 Y_RNA.474-201ENST00000384341 102 ntBASIC0.18□□□□□ -2.38
SMKR1H3BMG3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.18□□□□□ -2.38
SMKR1H3BMG3 SNORD11-201ENST00000459124 84 ntBASIC0.18□□□□□ -2.38
SMKR1H3BMG3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.18□□□□□ -2.38
SMKR1H3BMG3 MT-TL1-201ENST00000386347 75 ntBASIC0.17□□□□□ -2.38
SMKR1H3BMG3 RNU6-679P-201ENST00000391003 106 ntBASIC0.17□□□□□ -2.38
SMKR1H3BMG3 RNU7-62P-201ENST00000458856 62 ntBASIC0.17□□□□□ -2.38
SMKR1H3BMG3 RNU7-141P-201ENST00000459304 62 ntBASIC0.17□□□□□ -2.38
SMKR1H3BMG3 SNORA25.12-201ENST00000516202 82 ntBASIC0.17□□□□□ -2.38
SMKR1H3BMG3 MIR3145-201ENST00000580727 82 ntBASIC0.17□□□□□ -2.38
SMKR1H3BMG3 MIR5093-201ENST00000583199 100 ntBASIC0.17□□□□□ -2.38
SMKR1H3BMG3 AL355297.3-201ENST00000604082 446 ntBASIC0.17□□□□□ -2.38
SMKR1H3BMG3 MIR5087-201ENST00000635826 76 ntBASIC0.17□□□□□ -2.38
SMKR1H3BMG3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
SMKR1H3BMG3 MIR103A1-201ENST00000362165 78 ntBASIC0.16□□□□□ -2.38
SMKR1H3BMG3 SNORD44.1-201ENST00000363202 61 ntBASIC0.16□□□□□ -2.38
SMKR1H3BMG3 SNORA63C-201ENST00000364578 129 ntBASIC0.16□□□□□ -2.38
SMKR1H3BMG3 SNORA24-201ENST00000384096 131 ntBASIC0.16□□□□□ -2.38
SMKR1H3BMG3 RNU6-876P-201ENST00000391295 104 ntBASIC0.16□□□□□ -2.38
SMKR1H3BMG3 MIR938-201ENST00000401216 83 ntBASIC0.16□□□□□ -2.38
SMKR1H3BMG3 AC090844.1-201ENST00000422019 156 ntBASIC0.16□□□□□ -2.38
SMKR1H3BMG3 RNA5SP458-201ENST00000516188 119 ntBASIC0.16□□□□□ -2.38
SMKR1H3BMG3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.16□□□□□ -2.38
SMKR1H3BMG3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.16□□□□□ -2.38
SMKR1H3BMG3 AL512605.2-201ENST00000592972 256 ntBASIC0.16□□□□□ -2.38
SMKR1H3BMG3 MIR4272-201ENST00000635924 64 ntBASIC0.16□□□□□ -2.38
SMKR1H3BMG3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
SMKR1H3BMG3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.16□□□□□ -2.38
SMKR1H3BMG3 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
SMKR1H3BMG3 RNA5SP517-201ENST00000364724 117 ntBASIC0.15□□□□□ -2.39
SMKR1H3BMG3 Y_RNA.428-201ENST00000384078 102 ntBASIC0.15□□□□□ -2.39
SMKR1H3BMG3 SNORA72.4-201ENST00000384174 132 ntBASIC0.15□□□□□ -2.39
SMKR1H3BMG3 Y_RNA.458-201ENST00000384240 102 ntBASIC0.15□□□□□ -2.39
SMKR1H3BMG3 SNORD63-201ENST00000384262 68 ntBASIC0.15□□□□□ -2.39
SMKR1H3BMG3 Y_RNA.547-201ENST00000384654 119 ntBASIC0.15□□□□□ -2.39
SMKR1H3BMG3 Y_RNA.551-201ENST00000384661 102 ntBASIC0.15□□□□□ -2.39
SMKR1H3BMG3 MIR518A1-201ENST00000385068 85 ntBASIC0.15□□□□□ -2.39
SMKR1H3BMG3 SNORD100-201ENST00000408573 76 ntBASIC0.15□□□□□ -2.39
SMKR1H3BMG3 SNORA40.8-201ENST00000411034 126 ntBASIC0.15□□□□□ -2.39
SMKR1H3BMG3 RPS29P1-201ENST00000465274 159 ntBASIC0.15□□□□□ -2.39
SMKR1H3BMG3 AC022523.2-201ENST00000561045 150 ntBASIC0.15□□□□□ -2.39
SMKR1H3BMG3 MIR4524B-201ENST00000581569 115 ntBASIC0.15□□□□□ -2.39
SMKR1H3BMG3 AL121655.1-201ENST00000605811 308 ntBASIC0.15□□□□□ -2.39
SMKR1H3BMG3 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.15□□□□□ -2.39
SMKR1H3BMG3 AC134878.1-201ENST00000619901 243 ntBASIC0.15□□□□□ -2.39
SMKR1H3BMG3 RNU6-1048P-201ENST00000364054 107 ntBASIC0.14□□□□□ -2.39
SMKR1H3BMG3 RNU6-1040P-201ENST00000383974 107 ntBASIC0.14□□□□□ -2.39
SMKR1H3BMG3 SNORA50A-201ENST00000384225 134 ntBASIC0.14□□□□□ -2.39
SMKR1H3BMG3 RNU6-21P-201ENST00000384710 107 ntBASIC0.14□□□□□ -2.39
SMKR1H3BMG3 RNU6-1248P-201ENST00000391096 64 ntBASIC0.14□□□□□ -2.39
SMKR1H3BMG3 RNU2-14P-201ENST00000411053 191 ntBASIC0.14□□□□□ -2.39
SMKR1H3BMG3 SNORD71-201ENST00000411292 86 ntBASIC0.14□□□□□ -2.39
SMKR1H3BMG3 BTF3P11-201ENST00000426582 477 ntBASIC0.14□□□□□ -2.39
SMKR1H3BMG3 AC236972.2-201ENST00000434979 310 ntBASIC0.14□□□□□ -2.39
SMKR1H3BMG3 SNRPGP12-201ENST00000449481 213 ntBASIC0.14□□□□□ -2.39
SMKR1H3BMG3 MIR18B-201ENST00000454574 71 ntBASIC0.14□□□□□ -2.39
SMKR1H3BMG3 RNU7-67P-201ENST00000459003 62 ntBASIC0.14□□□□□ -2.39
SMKR1H3BMG3 AC091959.1-201ENST00000495857 238 ntBASIC0.14□□□□□ -2.39
SMKR1H3BMG3 SNORA18.4-201ENST00000516440 124 ntBASIC0.14□□□□□ -2.39
SMKR1H3BMG3 RNU7-25P-201ENST00000516544 62 ntBASIC0.14□□□□□ -2.39
SMKR1H3BMG3 SNORD116.3-201ENST00000517176 78 ntBASIC0.14□□□□□ -2.39
SMKR1H3BMG3 AC005357.1-201ENST00000588399 301 ntBASIC0.14□□□□□ -2.39
SMKR1H3BMG3 AC243829.3-201ENST00000622177 108 ntBASIC0.14□□□□□ -2.39
SMKR1H3BMG3 SNORD115-34-201ENST00000362441 82 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 SNORD115-12-201ENST00000362583 82 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 SNORD115-29-201ENST00000362834 82 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 SNORD115-9-201ENST00000362912 82 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 SNORD115-21-201ENST00000362963 81 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 SNORD115-14-201ENST00000363090 81 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 SNORD115-13-201ENST00000363358 82 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 SNORD115-41-201ENST00000363608 82 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 SNORD115-11-201ENST00000363616 82 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 SNORD115-5-201ENST00000363633 82 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 SNORD115-39-201ENST00000363694 82 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 SNORD115-4-201ENST00000363810 82 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 SNORD115-16-201ENST00000363887 82 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 SNORD115-6-201ENST00000363942 82 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 RNU6-801P-201ENST00000364087 105 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 SNORD115-42-201ENST00000364273 82 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 Y_RNA.259-201ENST00000364619 101 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 SNORD115-15-201ENST00000364809 81 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 SNORD115-1-201ENST00000364961 82 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 SNORD115-26-201ENST00000365067 82 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 SNORD115-10-201ENST00000365073 81 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 SNORD115-43-201ENST00000365503 82 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 SNORD115-36-201ENST00000365629 82 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 SNORD38B-201ENST00000384690 67 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 RNU4-30P-201ENST00000410245 143 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 RNU6-321P-201ENST00000410912 106 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.13□□□□□ -2.39
SMKR1H3BMG3 AC023449.1-201ENST00000454464 154 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.13□□□□□ -2.39
SMKR1H3BMG3 AC090897.1-201ENST00000580909 226 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 RPS29P30-201ENST00000600975 111 ntBASIC0.13□□□□□ -2.39
SMKR1H3BMG3 SNORD115-40-201ENST00000606510 82 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms