Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 MIR1302-7-201ENST00000408841 72 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 AC090844.1-201ENST00000422019 156 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 MRPS18CP6-201ENST00000423587 223 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 AC104332.1-201ENST00000440471 797 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 AC005042.3-201ENST00000453230 174 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 snoU13.11-201ENST00000459219 104 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 RNU7-43P-201ENST00000516554 64 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 AP003716.2-201ENST00000528260 108 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 MIR4804-201ENST00000581683 73 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 VN1R91P-201ENST00000594377 169 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 U6.92-201ENST00000636464 89 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 AC023934.1-201ENST00000574529 2389 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.7-201ENST00000362352 102 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.172-201ENST00000363765 102 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 RNU6-801P-201ENST00000364087 105 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 SNORA63.7-201ENST00000365579 123 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.537-201ENST00000384626 109 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 MIR520G-201ENST00000385064 90 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 MIR522-201ENST00000385071 87 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 MIR605-201ENST00000385078 83 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 MIR520H-201ENST00000385126 88 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 MT-TT-201ENST00000387460 66 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.587-201ENST00000391210 103 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.605-201ENST00000410577 105 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 AC138393.2-201ENST00000414742 246 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 RN7SKP164-201ENST00000516138 266 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 RNU6-559P-201ENST00000516151 98 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 AC005357.1-201ENST00000588399 301 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 AC090971.5-201ENST00000621102 293 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 AC005592.1-201ENST00000566527 1640 ntBASIC0.27□□□□□ -2.37
COL6A6A6NMZ7 RNU4-45P-201ENST00000365469 141 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 RNU6-969P-201ENST00000383900 105 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.457-201ENST00000384237 111 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 SNORA80D-201ENST00000384488 135 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 PDCL2P1-201ENST00000419302 352 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 MTCO2P27-201ENST00000420740 428 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 RPEP5-201ENST00000441137 268 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 MRPS10P1-201ENST00000448483 130 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 U7.7-201ENST00000459276 60 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 RNU6-977P-201ENST00000516411 103 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 RNU6-1012P-201ENST00000516606 109 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 RNU7-181P-201ENST00000517234 74 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 AC024405.2-202ENST00000532731 184 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 AC010205.1-201ENST00000616668 449 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 MIR6740-201ENST00000618268 113 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 MIR4251-201ENST00000635819 61 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 MIR4272-201ENST00000635924 64 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.168-201ENST00000363740 102 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 SNORD18A-201ENST00000363753 72 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 SNORD114-24-201ENST00000365029 72 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.387-201ENST00000383918 102 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.541-201ENST00000384640 113 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 RNU6-136P-201ENST00000384663 107 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 SNORA53-201ENST00000391141 249 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 RNU6-710P-201ENST00000410424 105 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 RNU6-370P-201ENST00000411008 104 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 ELOCP24-201ENST00000456370 334 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 RNU7-56P-201ENST00000458744 62 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 SCARNA8-201ENST00000515924 131 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 RNU7-4P-201ENST00000516961 62 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.713-201ENST00000517013 96 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 RNU6-448P-201ENST00000517052 107 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 AC136628.3-201ENST00000521868 290 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 AC018659.1-201ENST00000551083 169 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 AL355375.2-201ENST00000574825 175 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 MIR548AR-201ENST00000582191 57 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 UBE2V2P2-201ENST00000587677 504 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 uc_338.4-201ENST00000616635 176 ntBASIC0.26□□□□□ -2.37
COL6A6A6NMZ7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 RNU6-369P-201ENST00000362515 102 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 RNU4-79P-201ENST00000362764 141 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 RNU6-490P-201ENST00000362985 107 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 SNORA25.3-201ENST00000363205 127 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 RNA5SP48-201ENST00000363969 126 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 RNY3P11-201ENST00000364153 102 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 SNORD14.1-201ENST00000365609 90 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 RNU6-20P-201ENST00000384106 107 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.482-201ENST00000384377 111 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 RNU6-163P-201ENST00000384396 106 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 MIR570-201ENST00000384917 97 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.645-201ENST00000391229 102 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 MTCO2P33-201ENST00000402100 465 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 MTND5P20-201ENST00000448677 143 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 RNU7-41P-201ENST00000515917 61 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.661-201ENST00000516003 99 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 RNU6-1116P-201ENST00000517269 99 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 MIR4659A-201ENST00000580269 81 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 AC011476.5-201ENST00000615594 130 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms