Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 MIR597-201ENST00000384968 97 ntBASIC3.18□□□□□ -1.9
USP17L4A6NCW7 RNA5SP465-201ENST00000391195 109 ntBASIC3.18□□□□□ -1.9
USP17L4A6NCW7 AL034345.1-201ENST00000407768 123 ntBASIC3.18□□□□□ -1.9
USP17L4A6NCW7 SNORA3.2-201ENST00000408221 125 ntBASIC3.18□□□□□ -1.9
USP17L4A6NCW7 RNU6-240P-201ENST00000516098 97 ntBASIC3.18□□□□□ -1.9
USP17L4A6NCW7 MIR3605-201ENST00000583214 100 ntBASIC3.18□□□□□ -1.9
USP17L4A6NCW7 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.17□□□□□ -1.9
USP17L4A6NCW7 ICE2P2-201ENST00000483823 2787 ntBASIC3.17□□□□□ -1.9
USP17L4A6NCW7 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
USP17L4A6NCW7 RNU6-147P-201ENST00000383983 107 ntBASIC3.17□□□□□ -1.9
USP17L4A6NCW7 Y_RNA.440-201ENST00000384120 114 ntBASIC3.17□□□□□ -1.9
USP17L4A6NCW7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.17□□□□□ -1.9
USP17L4A6NCW7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.17□□□□□ -1.9
USP17L4A6NCW7 AC092185.1-201ENST00000491371 97 ntBASIC3.17□□□□□ -1.9
USP17L4A6NCW7 SNORA18.7-201ENST00000516910 131 ntBASIC3.17□□□□□ -1.9
USP17L4A6NCW7 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.17□□□□□ -1.9
USP17L4A6NCW7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
USP17L4A6NCW7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
USP17L4A6NCW7 AC008264.2-201ENST00000610193 3731 ntBASIC3.17□□□□□ -1.9
USP17L4A6NCW7 ZNF658B-202ENST00000615961 3375 ntBASIC3.17□□□□□ -1.9
USP17L4A6NCW7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.16□□□□□ -1.9
USP17L4A6NCW7 U8.2-201ENST00000363156 134 ntBASIC3.16□□□□□ -1.9
USP17L4A6NCW7 RNU1-133P-201ENST00000364867 167 ntBASIC3.16□□□□□ -1.9
USP17L4A6NCW7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.16□□□□□ -1.9
USP17L4A6NCW7 RNU7-80P-201ENST00000459562 61 ntBASIC3.16□□□□□ -1.9
USP17L4A6NCW7 RNA5SP320-201ENST00000516263 124 ntBASIC3.16□□□□□ -1.9
USP17L4A6NCW7 SNORA31.10-201ENST00000516482 106 ntBASIC3.16□□□□□ -1.9
USP17L4A6NCW7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.16□□□□□ -1.9
USP17L4A6NCW7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.16□□□□□ -1.9
USP17L4A6NCW7 AC008555.8-201ENST00000623602 2168 ntBASIC3.16□□□□□ -1.9
USP17L4A6NCW7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
USP17L4A6NCW7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
USP17L4A6NCW7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.15□□□□□ -1.9
USP17L4A6NCW7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
USP17L4A6NCW7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
USP17L4A6NCW7 RNA5SP289-201ENST00000362332 137 ntBASIC3.15□□□□□ -1.91
USP17L4A6NCW7 RNY1P6-201ENST00000384193 109 ntBASIC3.15□□□□□ -1.91
USP17L4A6NCW7 Y_RNA.454-201ENST00000384224 113 ntBASIC3.15□□□□□ -1.91
USP17L4A6NCW7 MIR27B-201ENST00000385129 97 ntBASIC3.15□□□□□ -1.91
USP17L4A6NCW7 MIR181B1-201ENST00000385240 110 ntBASIC3.15□□□□□ -1.91
USP17L4A6NCW7 MIR4679-2-201ENST00000578358 77 ntBASIC3.15□□□□□ -1.91
USP17L4A6NCW7 MIR4635-201ENST00000583759 79 ntBASIC3.15□□□□□ -1.91
USP17L4A6NCW7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.15□□□□□ -1.91
USP17L4A6NCW7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
USP17L4A6NCW7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
USP17L4A6NCW7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
USP17L4A6NCW7 MIRLET7C-201ENST00000362160 84 ntBASIC3.14□□□□□ -1.91
USP17L4A6NCW7 AL627390.1-201ENST00000396055 340 ntBASIC3.14□□□□□ -1.91
USP17L4A6NCW7 MIR1283-2-201ENST00000408621 87 ntBASIC3.14□□□□□ -1.91
USP17L4A6NCW7 RNU6-938P-201ENST00000411285 103 ntBASIC3.14□□□□□ -1.91
USP17L4A6NCW7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.14□□□□□ -1.91
USP17L4A6NCW7 HSPE1P9-201ENST00000440046 311 ntBASIC3.14□□□□□ -1.91
USP17L4A6NCW7 AC007012.1-201ENST00000567192 175 ntBASIC3.14□□□□□ -1.91
USP17L4A6NCW7 U4.3-201ENST00000621047 82 ntBASIC3.14□□□□□ -1.91
USP17L4A6NCW7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
USP17L4A6NCW7 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
USP17L4A6NCW7 SNORA63D-201ENST00000364359 132 ntBASIC3.13□□□□□ -1.91
USP17L4A6NCW7 Y_RNA.281-201ENST00000364774 94 ntBASIC3.13□□□□□ -1.91
USP17L4A6NCW7 RNU6-424P-201ENST00000384367 105 ntBASIC3.13□□□□□ -1.91
USP17L4A6NCW7 MIR518A2-201ENST00000384966 87 ntBASIC3.13□□□□□ -1.91
USP17L4A6NCW7 SNORA9.3-201ENST00000516383 129 ntBASIC3.13□□□□□ -1.91
USP17L4A6NCW7 RPPH1-2P-201ENST00000516688 293 ntBASIC3.13□□□□□ -1.91
USP17L4A6NCW7 RNU6-1116P-201ENST00000517269 99 ntBASIC3.13□□□□□ -1.91
USP17L4A6NCW7 MIR4778-201ENST00000577635 80 ntBASIC3.13□□□□□ -1.91
USP17L4A6NCW7 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.13□□□□□ -1.91
USP17L4A6NCW7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
USP17L4A6NCW7 Y_RNA.213-201ENST00000364178 111 ntBASIC3.12□□□□□ -1.91
USP17L4A6NCW7 Y_RNA.351-201ENST00000365436 96 ntBASIC3.12□□□□□ -1.91
USP17L4A6NCW7 HMGN2P3-201ENST00000433603 273 ntBASIC3.12□□□□□ -1.91
USP17L4A6NCW7 HMGN2P5-201ENST00000436882 273 ntBASIC3.12□□□□□ -1.91
USP17L4A6NCW7 AL031737.1-201ENST00000450125 223 ntBASIC3.12□□□□□ -1.91
USP17L4A6NCW7 snoU13.26-201ENST00000459452 105 ntBASIC3.12□□□□□ -1.91
USP17L4A6NCW7 UBL5P3-201ENST00000475112 231 ntBASIC3.12□□□□□ -1.91
USP17L4A6NCW7 AC021443.1-201ENST00000604478 211 ntBASIC3.12□□□□□ -1.91
USP17L4A6NCW7 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
USP17L4A6NCW7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
USP17L4A6NCW7 RNU6-349P-201ENST00000362402 107 ntBASIC3.11□□□□□ -1.91
USP17L4A6NCW7 RNU4-53P-201ENST00000410828 140 ntBASIC3.11□□□□□ -1.91
USP17L4A6NCW7 Z98742.3-201ENST00000418637 326 ntBASIC3.11□□□□□ -1.91
USP17L4A6NCW7 RNU6-830P-201ENST00000516353 107 ntBASIC3.11□□□□□ -1.91
USP17L4A6NCW7 RNY4P20-201ENST00000516678 93 ntBASIC3.11□□□□□ -1.91
USP17L4A6NCW7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.11□□□□□ -1.91
USP17L4A6NCW7 MIR4658-201ENST00000584344 65 ntBASIC3.11□□□□□ -1.91
USP17L4A6NCW7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
USP17L4A6NCW7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
USP17L4A6NCW7 AL161431.1-201ENST00000618966 4205 ntBASIC3.1□□□□□ -1.91
USP17L4A6NCW7 Y_RNA.116-201ENST00000363292 103 ntBASIC3.1□□□□□ -1.91
USP17L4A6NCW7 RNU6-833P-201ENST00000363486 107 ntBASIC3.1□□□□□ -1.91
USP17L4A6NCW7 Y_RNA.198-201ENST00000364013 98 ntBASIC3.1□□□□□ -1.91
USP17L4A6NCW7 SNORA25.6-201ENST00000364121 118 ntBASIC3.1□□□□□ -1.91
USP17L4A6NCW7 MIR520A-201ENST00000384862 85 ntBASIC3.1□□□□□ -1.91
USP17L4A6NCW7 MIR759-201ENST00000390224 91 ntBASIC3.1□□□□□ -1.91
USP17L4A6NCW7 U8.17-201ENST00000391292 132 ntBASIC3.1□□□□□ -1.91
USP17L4A6NCW7 MIR7843-201ENST00000622274 79 ntBASIC3.1□□□□□ -1.91
USP17L4A6NCW7 AC091932.4-201ENST00000623386 200 ntBASIC3.1□□□□□ -1.91
USP17L4A6NCW7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
USP17L4A6NCW7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
USP17L4A6NCW7 SNORD12C-201ENST00000386307 89 ntBASIC3.09□□□□□ -1.91
USP17L4A6NCW7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
USP17L4A6NCW7 SNORA48.1-201ENST00000390879 135 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms