Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 POLR2J4-204ENST00000418424 324 ntBASIC0.81□□□□□ -2.28
SMIM28A0A1B0GU29 HMGN2P32-201ENST00000444648 269 ntBASIC0.81□□□□□ -2.28
SMIM28A0A1B0GU29 SNORD123-201ENST00000459473 70 ntBASIC0.81□□□□□ -2.28
SMIM28A0A1B0GU29 RN7SKP164-201ENST00000516138 266 ntBASIC0.81□□□□□ -2.28
SMIM28A0A1B0GU29 RNU6-191P-201ENST00000516295 94 ntBASIC0.81□□□□□ -2.28
SMIM28A0A1B0GU29 Y_RNA.713-201ENST00000517013 96 ntBASIC0.81□□□□□ -2.28
SMIM28A0A1B0GU29 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.81□□□□□ -2.28
SMIM28A0A1B0GU29 AC124312.5-201ENST00000604451 268 ntBASIC0.81□□□□□ -2.28
SMIM28A0A1B0GU29 AL020996.3-201ENST00000606617 222 ntBASIC0.81□□□□□ -2.28
SMIM28A0A1B0GU29 SNORD113-5-201ENST00000607261 78 ntBASIC0.81□□□□□ -2.28
SMIM28A0A1B0GU29 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
SMIM28A0A1B0GU29 AL160413.1-201ENST00000622780 310 ntBASIC0.81□□□□□ -2.28
SMIM28A0A1B0GU29 RNU5E-4P-201ENST00000364931 120 ntBASIC0.8□□□□□ -2.28
SMIM28A0A1B0GU29 SNORD28B-201ENST00000390993 75 ntBASIC0.8□□□□□ -2.28
SMIM28A0A1B0GU29 Y_RNA.602-201ENST00000410535 92 ntBASIC0.8□□□□□ -2.28
SMIM28A0A1B0GU29 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.8□□□□□ -2.28
SMIM28A0A1B0GU29 RNU6-496P-201ENST00000516145 99 ntBASIC0.8□□□□□ -2.28
SMIM28A0A1B0GU29 RNU6-897P-201ENST00000517135 105 ntBASIC0.8□□□□□ -2.28
SMIM28A0A1B0GU29 MIR4764-201ENST00000580680 88 ntBASIC0.8□□□□□ -2.28
SMIM28A0A1B0GU29 MIR6835-201ENST00000621552 64 ntBASIC0.8□□□□□ -2.28
SMIM28A0A1B0GU29 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
SMIM28A0A1B0GU29 AC134026.1-201ENST00000623249 2239 ntBASIC0.79□□□□□ -2.28
SMIM28A0A1B0GU29 RNA5SP264-201ENST00000363115 107 ntBASIC0.79□□□□□ -2.28
SMIM28A0A1B0GU29 RNU6-1187P-201ENST00000364771 110 ntBASIC0.79□□□□□ -2.28
SMIM28A0A1B0GU29 Y_RNA.424-201ENST00000384063 103 ntBASIC0.79□□□□□ -2.28
SMIM28A0A1B0GU29 Y_RNA.431-201ENST00000384086 102 ntBASIC0.79□□□□□ -2.28
SMIM28A0A1B0GU29 MIR520C-201ENST00000385005 87 ntBASIC0.79□□□□□ -2.28
SMIM28A0A1B0GU29 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
SMIM28A0A1B0GU29 SNORD115-46-201ENST00000390982 71 ntBASIC0.79□□□□□ -2.28
SMIM28A0A1B0GU29 SNORD72-201ENST00000390994 80 ntBASIC0.79□□□□□ -2.28
SMIM28A0A1B0GU29 SNORA36B-201ENST00000410438 131 ntBASIC0.79□□□□□ -2.28
SMIM28A0A1B0GU29 AC024067.1-201ENST00000426199 223 ntBASIC0.79□□□□□ -2.28
SMIM28A0A1B0GU29 SNORD11-201ENST00000459124 84 ntBASIC0.79□□□□□ -2.28
SMIM28A0A1B0GU29 RNU6-437P-201ENST00000459408 95 ntBASIC0.79□□□□□ -2.28
SMIM28A0A1B0GU29 SEPT14P8-201ENST00000508026 178 ntBASIC0.79□□□□□ -2.28
SMIM28A0A1B0GU29 AC136628.3-201ENST00000521868 290 ntBASIC0.79□□□□□ -2.28
SMIM28A0A1B0GU29 MIR4714-201ENST00000580728 77 ntBASIC0.79□□□□□ -2.28
SMIM28A0A1B0GU29 AC090574.1-201ENST00000623186 233 ntBASIC0.79□□□□□ -2.28
SMIM28A0A1B0GU29 MIR103A2-201ENST00000362154 78 ntBASIC0.78□□□□□ -2.28
SMIM28A0A1B0GU29 Y_RNA.28-201ENST00000362554 111 ntBASIC0.78□□□□□ -2.28
SMIM28A0A1B0GU29 Y_RNA.216-201ENST00000364205 93 ntBASIC0.78□□□□□ -2.28
SMIM28A0A1B0GU29 RNU6-867P-201ENST00000364956 107 ntBASIC0.78□□□□□ -2.28
SMIM28A0A1B0GU29 Y_RNA.535-201ENST00000384612 99 ntBASIC0.78□□□□□ -2.28
SMIM28A0A1B0GU29 AL603910.2-201ENST00000407268 136 ntBASIC0.78□□□□□ -2.28
SMIM28A0A1B0GU29 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.78□□□□□ -2.28
SMIM28A0A1B0GU29 MIR1302-7-201ENST00000408841 72 ntBASIC0.78□□□□□ -2.28
SMIM28A0A1B0GU29 U8.19-201ENST00000459095 133 ntBASIC0.78□□□□□ -2.28
SMIM28A0A1B0GU29 AC008507.4-201ENST00000585464 127 ntBASIC0.78□□□□□ -2.28
SMIM28A0A1B0GU29 JPX_2.1-201ENST00000614161 69 ntBASIC0.78□□□□□ -2.28
SMIM28A0A1B0GU29 Y_RNA.183-201ENST00000363882 113 ntBASIC0.77□□□□□ -2.29
SMIM28A0A1B0GU29 SNORD14E-201ENST00000364009 85 ntBASIC0.77□□□□□ -2.29
SMIM28A0A1B0GU29 MIR15B-201ENST00000385045 98 ntBASIC0.77□□□□□ -2.29
SMIM28A0A1B0GU29 RNU6-763P-201ENST00000390865 106 ntBASIC0.77□□□□□ -2.29
SMIM28A0A1B0GU29 MTCO1P5-201ENST00000433573 344 ntBASIC0.77□□□□□ -2.29
SMIM28A0A1B0GU29 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.77□□□□□ -2.29
SMIM28A0A1B0GU29 Y_RNA.631-201ENST00000459607 101 ntBASIC0.77□□□□□ -2.29
SMIM28A0A1B0GU29 RNA5SP436-201ENST00000516020 115 ntBASIC0.77□□□□□ -2.29
SMIM28A0A1B0GU29 RNU6-764P-201ENST00000516396 105 ntBASIC0.77□□□□□ -2.29
SMIM28A0A1B0GU29 RNU7-43P-201ENST00000516554 64 ntBASIC0.77□□□□□ -2.29
SMIM28A0A1B0GU29 AC133485.1-201ENST00000567176 124 ntBASIC0.77□□□□□ -2.29
SMIM28A0A1B0GU29 AC138907.6-201ENST00000568401 126 ntBASIC0.77□□□□□ -2.29
SMIM28A0A1B0GU29 RPL23AP91-201ENST00000569211 455 ntBASIC0.77□□□□□ -2.29
SMIM28A0A1B0GU29 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.76□□□□□ -2.29
SMIM28A0A1B0GU29 Y_RNA.26-201ENST00000362539 101 ntBASIC0.76□□□□□ -2.29
SMIM28A0A1B0GU29 Y_RNA.61-201ENST00000362835 102 ntBASIC0.76□□□□□ -2.29
SMIM28A0A1B0GU29 Y_RNA.136-201ENST00000363444 102 ntBASIC0.76□□□□□ -2.29
SMIM28A0A1B0GU29 RNU6-674P-201ENST00000363831 107 ntBASIC0.76□□□□□ -2.29
SMIM28A0A1B0GU29 RNY1-201ENST00000364228 113 ntBASIC0.76□□□□□ -2.29
SMIM28A0A1B0GU29 RNU1-36P-201ENST00000365130 165 ntBASIC0.76□□□□□ -2.29
SMIM28A0A1B0GU29 RNU6-806P-201ENST00000365147 105 ntBASIC0.76□□□□□ -2.29
SMIM28A0A1B0GU29 SNORA22B-201ENST00000383876 138 ntBASIC0.76□□□□□ -2.29
SMIM28A0A1B0GU29 Y_RNA.581-201ENST00000391017 97 ntBASIC0.76□□□□□ -2.29
SMIM28A0A1B0GU29 MTCO2P33-201ENST00000402100 465 ntBASIC0.76□□□□□ -2.29
SMIM28A0A1B0GU29 MIR1252-201ENST00000408861 65 ntBASIC0.76□□□□□ -2.29
SMIM28A0A1B0GU29 RNU7-90P-201ENST00000459216 62 ntBASIC0.76□□□□□ -2.29
SMIM28A0A1B0GU29 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.76□□□□□ -2.29
SMIM28A0A1B0GU29 MRPS35P2-201ENST00000508242 191 ntBASIC0.76□□□□□ -2.29
SMIM28A0A1B0GU29 Y_RNA.711-201ENST00000516993 102 ntBASIC0.76□□□□□ -2.29
SMIM28A0A1B0GU29 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.76□□□□□ -2.29
SMIM28A0A1B0GU29 AC013244.2-201ENST00000603396 103 ntBASIC0.76□□□□□ -2.29
SMIM28A0A1B0GU29 MIR6515-201ENST00000619843 57 ntBASIC0.76□□□□□ -2.29
SMIM28A0A1B0GU29 AC008133.2-201ENST00000624540 351 ntBASIC0.76□□□□□ -2.29
SMIM28A0A1B0GU29 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
SMIM28A0A1B0GU29 snoU2_19.2-201ENST00000363024 80 ntBASIC0.75□□□□□ -2.29
SMIM28A0A1B0GU29 RNA5SP48-201ENST00000363969 126 ntBASIC0.75□□□□□ -2.29
SMIM28A0A1B0GU29 RNU6-268P-201ENST00000364174 107 ntBASIC0.75□□□□□ -2.29
SMIM28A0A1B0GU29 Y_RNA.330-201ENST00000365230 109 ntBASIC0.75□□□□□ -2.29
SMIM28A0A1B0GU29 SNORA63.7-201ENST00000365579 123 ntBASIC0.75□□□□□ -2.29
SMIM28A0A1B0GU29 Y_RNA.389-201ENST00000383924 113 ntBASIC0.75□□□□□ -2.29
SMIM28A0A1B0GU29 Y_RNA.460-201ENST00000384255 102 ntBASIC0.75□□□□□ -2.29
SMIM28A0A1B0GU29 MIR508-201ENST00000384857 115 ntBASIC0.75□□□□□ -2.29
SMIM28A0A1B0GU29 MIR215-201ENST00000384858 110 ntBASIC0.75□□□□□ -2.29
SMIM28A0A1B0GU29 MIR570-201ENST00000384917 97 ntBASIC0.75□□□□□ -2.29
SMIM28A0A1B0GU29 RPL21P38-201ENST00000418090 167 ntBASIC0.75□□□□□ -2.29
SMIM28A0A1B0GU29 ELOCP20-201ENST00000422460 345 ntBASIC0.75□□□□□ -2.29
SMIM28A0A1B0GU29 RPL39P28-201ENST00000465655 155 ntBASIC0.75□□□□□ -2.29
SMIM28A0A1B0GU29 AC098869.1-201ENST00000481627 292 ntBASIC0.75□□□□□ -2.29
SMIM28A0A1B0GU29 PDCD5P2-201ENST00000507570 312 ntBASIC0.75□□□□□ -2.29
SMIM28A0A1B0GU29 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.75□□□□□ -2.29
SMIM28A0A1B0GU29 AC023827.1-201ENST00000569247 97 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms