Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 RNU6-424P-201ENST00000384367 105 ntBASIC2.3□□□□□ -2.04
CCDC163A0A0D9SF12 RNU6-239P-201ENST00000390990 99 ntBASIC2.3□□□□□ -2.04
CCDC163A0A0D9SF12 Y_RNA.666-201ENST00000516187 112 ntBASIC2.3□□□□□ -2.04
CCDC163A0A0D9SF12 MIR378D2-201ENST00000580636 98 ntBASIC2.3□□□□□ -2.04
CCDC163A0A0D9SF12 AC080100.1-201ENST00000624239 5356 ntBASIC2.3□□□□□ -2.04
CCDC163A0A0D9SF12 ZNF355P-201ENST00000427301 3216 ntBASIC2.29□□□□□ -2.04
CCDC163A0A0D9SF12 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC163A0A0D9SF12 MIRLET7C-201ENST00000362160 84 ntBASIC2.29□□□□□ -2.04
CCDC163A0A0D9SF12 RNA5SP99-201ENST00000364020 114 ntBASIC2.29□□□□□ -2.04
CCDC163A0A0D9SF12 Y_RNA.337-201ENST00000365312 102 ntBASIC2.29□□□□□ -2.04
CCDC163A0A0D9SF12 Y_RNA.441-201ENST00000384123 112 ntBASIC2.29□□□□□ -2.04
CCDC163A0A0D9SF12 MIR891A-201ENST00000401237 79 ntBASIC2.29□□□□□ -2.04
CCDC163A0A0D9SF12 RNU6-394P-201ENST00000410735 107 ntBASIC2.29□□□□□ -2.04
CCDC163A0A0D9SF12 RPL30P13-201ENST00000418873 348 ntBASIC2.29□□□□□ -2.04
CCDC163A0A0D9SF12 CYCSP49-201ENST00000420810 319 ntBASIC2.29□□□□□ -2.04
CCDC163A0A0D9SF12 PGBD4P5-201ENST00000445958 426 ntBASIC2.29□□□□□ -2.04
CCDC163A0A0D9SF12 MIR4713-201ENST00000582691 75 ntBASIC2.29□□□□□ -2.04
CCDC163A0A0D9SF12 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC163A0A0D9SF12 AP000648.3-201ENST00000623539 4507 ntBASIC2.28□□□□□ -2.04
CCDC163A0A0D9SF12 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
CCDC163A0A0D9SF12 RNU6-774P-201ENST00000363238 107 ntBASIC2.28□□□□□ -2.04
CCDC163A0A0D9SF12 SNORA25.6-201ENST00000364121 118 ntBASIC2.28□□□□□ -2.04
CCDC163A0A0D9SF12 RNU6-1130P-201ENST00000365434 107 ntBASIC2.28□□□□□ -2.04
CCDC163A0A0D9SF12 RNU6-449P-201ENST00000383914 107 ntBASIC2.28□□□□□ -2.04
CCDC163A0A0D9SF12 RNU6-203P-201ENST00000384038 104 ntBASIC2.28□□□□□ -2.04
CCDC163A0A0D9SF12 SNORD37.2-201ENST00000391075 66 ntBASIC2.28□□□□□ -2.04
CCDC163A0A0D9SF12 SNORA26.9-201ENST00000391322 122 ntBASIC2.28□□□□□ -2.04
CCDC163A0A0D9SF12 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC163A0A0D9SF12 AC005840.1-201ENST00000498412 377 ntBASIC2.28□□□□□ -2.04
CCDC163A0A0D9SF12 RNU6-126P-201ENST00000516685 103 ntBASIC2.28□□□□□ -2.04
CCDC163A0A0D9SF12 RNU6-1270P-201ENST00000517128 108 ntBASIC2.28□□□□□ -2.04
CCDC163A0A0D9SF12 SUMO2P16-201ENST00000519475 264 ntBASIC2.28□□□□□ -2.04
CCDC163A0A0D9SF12 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC163A0A0D9SF12 RNU6-151P-201ENST00000364158 107 ntBASIC2.27□□□□□ -2.05
CCDC163A0A0D9SF12 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CCDC163A0A0D9SF12 RNU4-43P-201ENST00000410628 137 ntBASIC2.27□□□□□ -2.05
CCDC163A0A0D9SF12 RNA5SP489-201ENST00000410986 109 ntBASIC2.27□□□□□ -2.05
CCDC163A0A0D9SF12 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.27□□□□□ -2.05
CCDC163A0A0D9SF12 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC163A0A0D9SF12 AC099513.1-201ENST00000490423 301 ntBASIC2.27□□□□□ -2.05
CCDC163A0A0D9SF12 RNU6-693P-201ENST00000516134 107 ntBASIC2.27□□□□□ -2.05
CCDC163A0A0D9SF12 RNA5SP153-201ENST00000516498 76 ntBASIC2.27□□□□□ -2.05
CCDC163A0A0D9SF12 SNORD116-25-201ENST00000516517 92 ntBASIC2.27□□□□□ -2.05
CCDC163A0A0D9SF12 RNU6-504P-201ENST00000516568 104 ntBASIC2.27□□□□□ -2.05
CCDC163A0A0D9SF12 RNU6-255P-201ENST00000516957 105 ntBASIC2.27□□□□□ -2.05
CCDC163A0A0D9SF12 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.27□□□□□ -2.05
CCDC163A0A0D9SF12 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
CCDC163A0A0D9SF12 Y_RNA.336-201ENST00000365307 109 ntBASIC2.26□□□□□ -2.05
CCDC163A0A0D9SF12 SNORA64-201ENST00000384674 134 ntBASIC2.26□□□□□ -2.05
CCDC163A0A0D9SF12 HMGN2P32-201ENST00000444648 269 ntBASIC2.26□□□□□ -2.05
CCDC163A0A0D9SF12 RNA5SP200-201ENST00000516360 103 ntBASIC2.26□□□□□ -2.05
CCDC163A0A0D9SF12 MTND5P41-201ENST00000517498 206 ntBASIC2.26□□□□□ -2.05
CCDC163A0A0D9SF12 AC106754.2-201ENST00000623006 233 ntBASIC2.26□□□□□ -2.05
CCDC163A0A0D9SF12 AC095038.3-201ENST00000634439 195 ntBASIC2.26□□□□□ -2.05
CCDC163A0A0D9SF12 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC163A0A0D9SF12 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC163A0A0D9SF12 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CCDC163A0A0D9SF12 AL513423.1-201ENST00000621695 132 ntBASIC2.25□□□□□ -2.05
CCDC163A0A0D9SF12 MIR6132-201ENST00000622083 109 ntBASIC2.25□□□□□ -2.05
CCDC163A0A0D9SF12 AC027279.3-201ENST00000625055 122 ntBASIC2.25□□□□□ -2.05
CCDC163A0A0D9SF12 MIR3658-201ENST00000636291 56 ntBASIC2.25□□□□□ -2.05
CCDC163A0A0D9SF12 MIR6844-201ENST00000637122 62 ntBASIC2.25□□□□□ -2.05
CCDC163A0A0D9SF12 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CCDC163A0A0D9SF12 RNU6-199P-201ENST00000362954 107 ntBASIC2.24□□□□□ -2.05
CCDC163A0A0D9SF12 Y_RNA.170-201ENST00000363746 110 ntBASIC2.24□□□□□ -2.05
CCDC163A0A0D9SF12 RNU6-268P-201ENST00000364174 107 ntBASIC2.24□□□□□ -2.05
CCDC163A0A0D9SF12 RNU6-768P-201ENST00000384683 107 ntBASIC2.24□□□□□ -2.05
CCDC163A0A0D9SF12 MIR221-201ENST00000385135 110 ntBASIC2.24□□□□□ -2.05
CCDC163A0A0D9SF12 MIR516B2-201ENST00000385190 85 ntBASIC2.24□□□□□ -2.05
CCDC163A0A0D9SF12 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CCDC163A0A0D9SF12 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CCDC163A0A0D9SF12 U8.13-201ENST00000390842 128 ntBASIC2.24□□□□□ -2.05
CCDC163A0A0D9SF12 MIR548M-201ENST00000408260 86 ntBASIC2.24□□□□□ -2.05
CCDC163A0A0D9SF12 MIR1267-201ENST00000408723 78 ntBASIC2.24□□□□□ -2.05
CCDC163A0A0D9SF12 AC015726.2-201ENST00000620112 122 ntBASIC2.24□□□□□ -2.05
CCDC163A0A0D9SF12 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CCDC163A0A0D9SF12 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.24□□□□□ -2.05
CCDC163A0A0D9SF12 RNU6-833P-201ENST00000363486 107 ntBASIC2.23□□□□□ -2.05
CCDC163A0A0D9SF12 SNORD61-201ENST00000384252 73 ntBASIC2.23□□□□□ -2.05
CCDC163A0A0D9SF12 SNORD38C-201ENST00000384381 69 ntBASIC2.23□□□□□ -2.05
CCDC163A0A0D9SF12 MIR660-201ENST00000385235 97 ntBASIC2.23□□□□□ -2.05
CCDC163A0A0D9SF12 SNRPGP13-201ENST00000442212 177 ntBASIC2.23□□□□□ -2.05
CCDC163A0A0D9SF12 AC079804.2-201ENST00000490376 200 ntBASIC2.23□□□□□ -2.05
CCDC163A0A0D9SF12 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.23□□□□□ -2.05
CCDC163A0A0D9SF12 RNU6-295P-201ENST00000516901 104 ntBASIC2.23□□□□□ -2.05
CCDC163A0A0D9SF12 SNORA44.1-201ENST00000517031 108 ntBASIC2.23□□□□□ -2.05
CCDC163A0A0D9SF12 RNA5SP402-201ENST00000517148 110 ntBASIC2.23□□□□□ -2.05
CCDC163A0A0D9SF12 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC163A0A0D9SF12 DNAJC19P2-201ENST00000593340 302 ntBASIC2.23□□□□□ -2.05
CCDC163A0A0D9SF12 MIR6766-201ENST00000622641 72 ntBASIC2.23□□□□□ -2.05
CCDC163A0A0D9SF12 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CCDC163A0A0D9SF12 MIR424-201ENST00000362227 98 ntBASIC2.22□□□□□ -2.05
CCDC163A0A0D9SF12 RNU6-818P-201ENST00000364837 108 ntBASIC2.22□□□□□ -2.05
CCDC163A0A0D9SF12 RNA5SP259-201ENST00000365541 109 ntBASIC2.22□□□□□ -2.05
CCDC163A0A0D9SF12 RNU6-1336P-201ENST00000383886 109 ntBASIC2.22□□□□□ -2.05
CCDC163A0A0D9SF12 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.22□□□□□ -2.05
CCDC163A0A0D9SF12 SNORA48.3-201ENST00000391081 134 ntBASIC2.22□□□□□ -2.05
CCDC163A0A0D9SF12 MIR548O-201ENST00000408583 114 ntBASIC2.22□□□□□ -2.05
CCDC163A0A0D9SF12 AC004965.1-201ENST00000413033 213 ntBASIC2.22□□□□□ -2.05
CCDC163A0A0D9SF12 HMGN2P38-201ENST00000423806 265 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 192.1 ms