Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 RNU6-131P-201ENST00000391144 107 ntBASIC2.12□□□□□ -2.07
PCDHA13Q9Y5I0 SNORA3.2-201ENST00000408221 125 ntBASIC2.12□□□□□ -2.07
PCDHA13Q9Y5I0 RN7SKP51-201ENST00000410781 304 ntBASIC2.12□□□□□ -2.07
PCDHA13Q9Y5I0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.12□□□□□ -2.07
PCDHA13Q9Y5I0 HSPE1P9-201ENST00000440046 311 ntBASIC2.12□□□□□ -2.07
PCDHA13Q9Y5I0 SNRPGP8-201ENST00000454064 226 ntBASIC2.12□□□□□ -2.07
PCDHA13Q9Y5I0 snoU13.27-201ENST00000459278 104 ntBASIC2.12□□□□□ -2.07
PCDHA13Q9Y5I0 AL160236.1-201ENST00000556317 195 ntBASIC2.12□□□□□ -2.07
PCDHA13Q9Y5I0 MIR4662B-201ENST00000579498 81 ntBASIC2.12□□□□□ -2.07
PCDHA13Q9Y5I0 MIR3124-201ENST00000582636 67 ntBASIC2.12□□□□□ -2.07
PCDHA13Q9Y5I0 MIR4448-201ENST00000584360 86 ntBASIC2.12□□□□□ -2.07
PCDHA13Q9Y5I0 AL773524.1-201ENST00000614065 229 ntBASIC2.12□□□□□ -2.07
PCDHA13Q9Y5I0 MIR6873-201ENST00000622788 63 ntBASIC2.12□□□□□ -2.07
PCDHA13Q9Y5I0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PCDHA13Q9Y5I0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
PCDHA13Q9Y5I0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
PCDHA13Q9Y5I0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
PCDHA13Q9Y5I0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.11□□□□□ -2.07
PCDHA13Q9Y5I0 Z98742.3-201ENST00000418637 326 ntBASIC2.11□□□□□ -2.07
PCDHA13Q9Y5I0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.11□□□□□ -2.07
PCDHA13Q9Y5I0 STAG3L5P-204ENST00000443759 179 ntBASIC2.11□□□□□ -2.07
PCDHA13Q9Y5I0 SNORA31.17-201ENST00000516953 127 ntBASIC2.11□□□□□ -2.07
PCDHA13Q9Y5I0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.11□□□□□ -2.07
PCDHA13Q9Y5I0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.11□□□□□ -2.07
PCDHA13Q9Y5I0 MIR4431-201ENST00000579990 94 ntBASIC2.11□□□□□ -2.07
PCDHA13Q9Y5I0 SNRPGP19-201ENST00000603826 189 ntBASIC2.11□□□□□ -2.07
PCDHA13Q9Y5I0 RNA5SP276-201ENST00000362580 94 ntBASIC2.1□□□□□ -2.07
PCDHA13Q9Y5I0 SNORD68-201ENST00000363214 84 ntBASIC2.1□□□□□ -2.07
PCDHA13Q9Y5I0 SNORA12.1-201ENST00000390873 148 ntBASIC2.1□□□□□ -2.07
PCDHA13Q9Y5I0 RNA5SP489-201ENST00000410986 109 ntBASIC2.1□□□□□ -2.07
PCDHA13Q9Y5I0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.1□□□□□ -2.07
PCDHA13Q9Y5I0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.1□□□□□ -2.07
PCDHA13Q9Y5I0 AL121914.1-201ENST00000450188 156 ntBASIC2.1□□□□□ -2.07
PCDHA13Q9Y5I0 RN7SL274P-201ENST00000492268 272 ntBASIC2.1□□□□□ -2.07
PCDHA13Q9Y5I0 RNU6-1299P-201ENST00000516316 100 ntBASIC2.1□□□□□ -2.07
PCDHA13Q9Y5I0 RNU7-149P-201ENST00000516739 59 ntBASIC2.1□□□□□ -2.07
PCDHA13Q9Y5I0 MIR4709-201ENST00000577272 72 ntBASIC2.1□□□□□ -2.07
PCDHA13Q9Y5I0 AC008507.4-201ENST00000585464 127 ntBASIC2.1□□□□□ -2.07
PCDHA13Q9Y5I0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.1□□□□□ -2.07
PCDHA13Q9Y5I0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.09□□□□□ -2.07
PCDHA13Q9Y5I0 RNU6-484P-201ENST00000384016 107 ntBASIC2.09□□□□□ -2.07
PCDHA13Q9Y5I0 SNORA67.3-201ENST00000384366 140 ntBASIC2.09□□□□□ -2.07
PCDHA13Q9Y5I0 MIR15B-201ENST00000385045 98 ntBASIC2.09□□□□□ -2.07
PCDHA13Q9Y5I0 RNU6-1135P-201ENST00000411083 103 ntBASIC2.09□□□□□ -2.07
PCDHA13Q9Y5I0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.09□□□□□ -2.07
PCDHA13Q9Y5I0 MLLT10P1-201ENST00000418346 262 ntBASIC2.09□□□□□ -2.07
PCDHA13Q9Y5I0 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.09□□□□□ -2.07
PCDHA13Q9Y5I0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.09□□□□□ -2.07
PCDHA13Q9Y5I0 AC074198.2-201ENST00000508153 258 ntBASIC2.09□□□□□ -2.07
PCDHA13Q9Y5I0 RNU1-41P-201ENST00000516161 162 ntBASIC2.09□□□□□ -2.07
PCDHA13Q9Y5I0 RNU6-561P-201ENST00000516222 102 ntBASIC2.09□□□□□ -2.07
PCDHA13Q9Y5I0 RNU1-48P-201ENST00000516400 162 ntBASIC2.09□□□□□ -2.07
PCDHA13Q9Y5I0 RNA5SP153-201ENST00000516498 76 ntBASIC2.09□□□□□ -2.07
PCDHA13Q9Y5I0 RNU6-1212P-201ENST00000517023 104 ntBASIC2.09□□□□□ -2.07
PCDHA13Q9Y5I0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.09□□□□□ -2.07
PCDHA13Q9Y5I0 Pinc.1-201ENST00000616452 154 ntBASIC2.09□□□□□ -2.07
PCDHA13Q9Y5I0 AC027279.3-201ENST00000625055 122 ntBASIC2.09□□□□□ -2.07
PCDHA13Q9Y5I0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
PCDHA13Q9Y5I0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.08
PCDHA13Q9Y5I0 MIRLET7C-201ENST00000362160 84 ntBASIC2.08□□□□□ -2.08
PCDHA13Q9Y5I0 SNORD45.3-201ENST00000363836 72 ntBASIC2.08□□□□□ -2.08
PCDHA13Q9Y5I0 SNORA64-201ENST00000384674 134 ntBASIC2.08□□□□□ -2.08
PCDHA13Q9Y5I0 SNORA26-201ENST00000391286 122 ntBASIC2.08□□□□□ -2.08
PCDHA13Q9Y5I0 RNU6-394P-201ENST00000410735 107 ntBASIC2.08□□□□□ -2.08
PCDHA13Q9Y5I0 AC244636.1-201ENST00000421152 228 ntBASIC2.08□□□□□ -2.08
PCDHA13Q9Y5I0 UBL5P3-201ENST00000475112 231 ntBASIC2.08□□□□□ -2.08
PCDHA13Q9Y5I0 AC022254.1-201ENST00000567857 235 ntBASIC2.08□□□□□ -2.08
PCDHA13Q9Y5I0 uc_338.20-201ENST00000621563 178 ntBASIC2.08□□□□□ -2.08
PCDHA13Q9Y5I0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.08□□□□□ -2.08
PCDHA13Q9Y5I0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.07□□□□□ -2.08
PCDHA13Q9Y5I0 snoU2-30.1-201ENST00000365012 70 ntBASIC2.07□□□□□ -2.08
PCDHA13Q9Y5I0 Y_RNA.357-201ENST00000365487 109 ntBASIC2.07□□□□□ -2.08
PCDHA13Q9Y5I0 Y_RNA.432-201ENST00000384087 111 ntBASIC2.07□□□□□ -2.08
PCDHA13Q9Y5I0 Y_RNA.622-201ENST00000411091 108 ntBASIC2.07□□□□□ -2.08
PCDHA13Q9Y5I0 RNA5SP57-201ENST00000459463 123 ntBASIC2.07□□□□□ -2.08
PCDHA13Q9Y5I0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.07□□□□□ -2.08
PCDHA13Q9Y5I0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
PCDHA13Q9Y5I0 RNU4-84P-201ENST00000364200 139 ntBASIC2.06□□□□□ -2.08
PCDHA13Q9Y5I0 SNORD50B-201ENST00000364995 70 ntBASIC2.06□□□□□ -2.08
PCDHA13Q9Y5I0 Y_RNA.336-201ENST00000365307 109 ntBASIC2.06□□□□□ -2.08
PCDHA13Q9Y5I0 RNU6-1062P-201ENST00000383908 107 ntBASIC2.06□□□□□ -2.08
PCDHA13Q9Y5I0 SNORA6-201ENST00000384033 151 ntBASIC2.06□□□□□ -2.08
PCDHA13Q9Y5I0 RNU6-424P-201ENST00000384367 105 ntBASIC2.06□□□□□ -2.08
PCDHA13Q9Y5I0 SNORA79-201ENST00000408376 140 ntBASIC2.06□□□□□ -2.08
PCDHA13Q9Y5I0 RNU5E-9P-201ENST00000411164 104 ntBASIC2.06□□□□□ -2.08
PCDHA13Q9Y5I0 HMGN2P19-201ENST00000425149 265 ntBASIC2.06□□□□□ -2.08
PCDHA13Q9Y5I0 AL445646.1-201ENST00000431784 216 ntBASIC2.06□□□□□ -2.08
PCDHA13Q9Y5I0 SEPT7P4-201ENST00000437076 306 ntBASIC2.06□□□□□ -2.08
PCDHA13Q9Y5I0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
PCDHA13Q9Y5I0 CYCTP-201ENST00000504253 315 ntBASIC2.06□□□□□ -2.08
PCDHA13Q9Y5I0 MRPS17P9-201ENST00000511924 393 ntBASIC2.06□□□□□ -2.08
PCDHA13Q9Y5I0 SNORD45.4-201ENST00000516629 73 ntBASIC2.06□□□□□ -2.08
PCDHA13Q9Y5I0 RNU6-197P-201ENST00000516680 100 ntBASIC2.06□□□□□ -2.08
PCDHA13Q9Y5I0 MIR1273D-201ENST00000577266 86 ntBASIC2.06□□□□□ -2.08
PCDHA13Q9Y5I0 MIR4648-201ENST00000580107 72 ntBASIC2.06□□□□□ -2.08
PCDHA13Q9Y5I0 AC097639.2-201ENST00000603159 172 ntBASIC2.06□□□□□ -2.08
PCDHA13Q9Y5I0 MIR6840-201ENST00000611937 71 ntBASIC2.06□□□□□ -2.08
PCDHA13Q9Y5I0 AC021506.2-201ENST00000612354 169 ntBASIC2.06□□□□□ -2.08
PCDHA13Q9Y5I0 AL513423.1-201ENST00000621695 132 ntBASIC2.06□□□□□ -2.08
PCDHA13Q9Y5I0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms