Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 SNORA67.1-201ENST00000364749 141 ntBASIC2.59□□□□□ -1.99
PTPN22Q9Y2R2 RNU6-915P-201ENST00000364943 103 ntBASIC2.59□□□□□ -1.99
PTPN22Q9Y2R2 Y_RNA.799-201ENST00000364992 102 ntBASIC2.59□□□□□ -1.99
PTPN22Q9Y2R2 RNU6-1138P-201ENST00000365359 106 ntBASIC2.59□□□□□ -1.99
PTPN22Q9Y2R2 RNU6-1080P-201ENST00000383982 107 ntBASIC2.59□□□□□ -1.99
PTPN22Q9Y2R2 Y_RNA.466-201ENST00000384294 113 ntBASIC2.59□□□□□ -1.99
PTPN22Q9Y2R2 SNORD20-201ENST00000384550 80 ntBASIC2.59□□□□□ -1.99
PTPN22Q9Y2R2 Y_RNA.584-201ENST00000391090 114 ntBASIC2.59□□□□□ -1.99
PTPN22Q9Y2R2 MIR1262-201ENST00000408276 93 ntBASIC2.59□□□□□ -1.99
PTPN22Q9Y2R2 AC245517.4-201ENST00000448601 281 ntBASIC2.59□□□□□ -1.99
PTPN22Q9Y2R2 AC011604.1-201ENST00000545978 196 ntBASIC2.59□□□□□ -1.99
PTPN22Q9Y2R2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.59□□□□□ -1.99
PTPN22Q9Y2R2 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.59□□□□□ -1.99
PTPN22Q9Y2R2 MIR203B-201ENST00000636080 86 ntBASIC2.59□□□□□ -1.99
PTPN22Q9Y2R2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
PTPN22Q9Y2R2 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PTPN22Q9Y2R2 ZNF271P-202ENST00000465539 1970 ntBASIC2.59□□□□□ -2
PTPN22Q9Y2R2 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.59□□□□□ -2
PTPN22Q9Y2R2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
PTPN22Q9Y2R2 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
PTPN22Q9Y2R2 RNU6-23P-201ENST00000363283 107 ntBASIC2.58□□□□□ -2
PTPN22Q9Y2R2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.58□□□□□ -2
PTPN22Q9Y2R2 AC060773.1-201ENST00000421698 310 ntBASIC2.58□□□□□ -2
PTPN22Q9Y2R2 AL353689.1-201ENST00000438895 199 ntBASIC2.58□□□□□ -2
PTPN22Q9Y2R2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.58□□□□□ -2
PTPN22Q9Y2R2 Y_RNA.686-201ENST00000516548 134 ntBASIC2.58□□□□□ -2
PTPN22Q9Y2R2 SNORA31.15-201ENST00000516771 132 ntBASIC2.58□□□□□ -2
PTPN22Q9Y2R2 RNU2-56P-201ENST00000516826 190 ntBASIC2.58□□□□□ -2
PTPN22Q9Y2R2 Y_RNA.712-201ENST00000517011 92 ntBASIC2.58□□□□□ -2
PTPN22Q9Y2R2 RPL23AP91-201ENST00000569211 455 ntBASIC2.58□□□□□ -2
PTPN22Q9Y2R2 MIR4529-201ENST00000578110 78 ntBASIC2.58□□□□□ -2
PTPN22Q9Y2R2 snoU13.31-201ENST00000607291 104 ntBASIC2.58□□□□□ -2
PTPN22Q9Y2R2 AL353149.1-201ENST00000610667 244 ntBASIC2.58□□□□□ -2
PTPN22Q9Y2R2 AL137847.3-201ENST00000611521 109 ntBASIC2.58□□□□□ -2
PTPN22Q9Y2R2 MIR6845-201ENST00000613182 61 ntBASIC2.58□□□□□ -2
PTPN22Q9Y2R2 AC022202.1-201ENST00000613515 211 ntBASIC2.58□□□□□ -2
PTPN22Q9Y2R2 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
PTPN22Q9Y2R2 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
PTPN22Q9Y2R2 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
PTPN22Q9Y2R2 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.57□□□□□ -2
PTPN22Q9Y2R2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.57□□□□□ -2
PTPN22Q9Y2R2 Y_RNA.120-201ENST00000363304 110 ntBASIC2.57□□□□□ -2
PTPN22Q9Y2R2 RNU6-1209P-201ENST00000363655 107 ntBASIC2.57□□□□□ -2
PTPN22Q9Y2R2 Y_RNA.634-201ENST00000364811 113 ntBASIC2.57□□□□□ -2
PTPN22Q9Y2R2 RNU1-51P-201ENST00000365345 176 ntBASIC2.57□□□□□ -2
PTPN22Q9Y2R2 MIR221-201ENST00000385135 110 ntBASIC2.57□□□□□ -2
PTPN22Q9Y2R2 MIR1253-201ENST00000408273 105 ntBASIC2.57□□□□□ -2
PTPN22Q9Y2R2 SNORA11.4-201ENST00000408823 129 ntBASIC2.57□□□□□ -2
PTPN22Q9Y2R2 AC018634.1-201ENST00000437554 401 ntBASIC2.57□□□□□ -2
PTPN22Q9Y2R2 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.57□□□□□ -2
PTPN22Q9Y2R2 RNU1-131P-201ENST00000458943 161 ntBASIC2.57□□□□□ -2
PTPN22Q9Y2R2 RNU6-919P-201ENST00000516731 104 ntBASIC2.57□□□□□ -2
PTPN22Q9Y2R2 AC090049.2-201ENST00000550377 109 ntBASIC2.57□□□□□ -2
PTPN22Q9Y2R2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.57□□□□□ -2
PTPN22Q9Y2R2 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
PTPN22Q9Y2R2 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.56□□□□□ -2
PTPN22Q9Y2R2 Z82195.2-201ENST00000612348 18351 ntBASIC2.56□□□□□ -2
PTPN22Q9Y2R2 snoU2-30.2-201ENST00000362805 70 ntBASIC2.56□□□□□ -2
PTPN22Q9Y2R2 SNORA3A-201ENST00000364113 130 ntBASIC2.56□□□□□ -2
PTPN22Q9Y2R2 Y_RNA.280-201ENST00000364765 112 ntBASIC2.56□□□□□ -2
PTPN22Q9Y2R2 RNU6-136P-201ENST00000384663 107 ntBASIC2.56□□□□□ -2
PTPN22Q9Y2R2 RNU7-99P-201ENST00000516271 62 ntBASIC2.56□□□□□ -2
PTPN22Q9Y2R2 Y_RNA.757-201ENST00000578934 114 ntBASIC2.56□□□□□ -2
PTPN22Q9Y2R2 AC245884.12-201ENST00000615364 59 ntBASIC2.56□□□□□ -2
PTPN22Q9Y2R2 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.56□□□□□ -2
PTPN22Q9Y2R2 RNU1-58P-201ENST00000362413 163 ntBASIC2.55□□□□□ -2
PTPN22Q9Y2R2 RNA5SP393-201ENST00000363423 117 ntBASIC2.55□□□□□ -2
PTPN22Q9Y2R2 RNU2-70P-201ENST00000410718 179 ntBASIC2.55□□□□□ -2
PTPN22Q9Y2R2 HMGN2P34-201ENST00000437647 269 ntBASIC2.55□□□□□ -2
PTPN22Q9Y2R2 OR9P1P-201ENST00000496431 281 ntBASIC2.55□□□□□ -2
PTPN22Q9Y2R2 AC011406.1-201ENST00000512440 370 ntBASIC2.55□□□□□ -2
PTPN22Q9Y2R2 RNU6-1096P-201ENST00000517089 102 ntBASIC2.55□□□□□ -2
PTPN22Q9Y2R2 RNU7-128P-201ENST00000517247 62 ntBASIC2.55□□□□□ -2
PTPN22Q9Y2R2 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.55□□□□□ -2
PTPN22Q9Y2R2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.55□□□□□ -2
PTPN22Q9Y2R2 AL358944.1-201ENST00000528537 144 ntBASIC2.55□□□□□ -2
PTPN22Q9Y2R2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.55□□□□□ -2
PTPN22Q9Y2R2 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.55□□□□□ -2
PTPN22Q9Y2R2 AC091178.2-201ENST00000584401 117 ntBASIC2.55□□□□□ -2
PTPN22Q9Y2R2 AC131055.1-201ENST00000584626 316 ntBASIC2.55□□□□□ -2
PTPN22Q9Y2R2 AC007229.1-201ENST00000590455 412 ntBASIC2.55□□□□□ -2
PTPN22Q9Y2R2 AC067747.1-201ENST00000608026 250 ntBASIC2.55□□□□□ -2
PTPN22Q9Y2R2 MIR337-201ENST00000362281 93 ntBASIC2.54□□□□□ -2
PTPN22Q9Y2R2 MIR499A-201ENST00000384903 122 ntBASIC2.54□□□□□ -2
PTPN22Q9Y2R2 RNU11-3P-201ENST00000391111 133 ntBASIC2.54□□□□□ -2
PTPN22Q9Y2R2 RNA5SP465-201ENST00000391195 109 ntBASIC2.54□□□□□ -2
PTPN22Q9Y2R2 HMGN2P39-201ENST00000398005 273 ntBASIC2.54□□□□□ -2
PTPN22Q9Y2R2 AL035461.1-201ENST00000421490 332 ntBASIC2.54□□□□□ -2
PTPN22Q9Y2R2 RPS15AP28-201ENST00000435088 386 ntBASIC2.54□□□□□ -2
PTPN22Q9Y2R2 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
PTPN22Q9Y2R2 AC018630.2-201ENST00000534866 2403 ntBASIC2.53□□□□□ -2
PTPN22Q9Y2R2 WWP1P1-201ENST00000466609 2769 ntBASIC2.53□□□□□ -2
PTPN22Q9Y2R2 MIR21-201ENST00000362134 72 ntBASIC2.53□□□□□ -2
PTPN22Q9Y2R2 Y_RNA.91-201ENST00000363042 107 ntBASIC2.53□□□□□ -2
PTPN22Q9Y2R2 RNU6-1056P-201ENST00000383996 107 ntBASIC2.53□□□□□ -2
PTPN22Q9Y2R2 MIR489-201ENST00000384923 84 ntBASIC2.53□□□□□ -2
PTPN22Q9Y2R2 MIR518A2-201ENST00000384966 87 ntBASIC2.53□□□□□ -2
PTPN22Q9Y2R2 RNU6-321P-201ENST00000410912 106 ntBASIC2.53□□□□□ -2
PTPN22Q9Y2R2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.53□□□□□ -2
PTPN22Q9Y2R2 AC011753.1-201ENST00000451001 220 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 201.1 ms