Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 MIR34B-201ENST00000385076 84 ntBASIC4.38□□□□□ -1.71
TRIM35Q9UPQ4 PRSS3P4-201ENST00000453323 162 ntBASIC4.38□□□□□ -1.71
TRIM35Q9UPQ4 AL163195.1-201ENST00000496941 348 ntBASIC4.38□□□□□ -1.71
TRIM35Q9UPQ4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM35Q9UPQ4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM35Q9UPQ4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM35Q9UPQ4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM35Q9UPQ4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM35Q9UPQ4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM35Q9UPQ4 RNA5SP133-201ENST00000363368 119 ntBASIC4.37□□□□□ -1.71
TRIM35Q9UPQ4 RNA5SP138-201ENST00000365098 114 ntBASIC4.37□□□□□ -1.71
TRIM35Q9UPQ4 SNORA2B-201ENST00000384583 137 ntBASIC4.37□□□□□ -1.71
TRIM35Q9UPQ4 TRIAP1P1-201ENST00000427062 225 ntBASIC4.37□□□□□ -1.71
TRIM35Q9UPQ4 snoU13.22-201ENST00000459428 104 ntBASIC4.37□□□□□ -1.71
TRIM35Q9UPQ4 FGF7P7-201ENST00000514120 227 ntBASIC4.37□□□□□ -1.71
TRIM35Q9UPQ4 RNU6-958P-201ENST00000516995 106 ntBASIC4.37□□□□□ -1.71
TRIM35Q9UPQ4 AC007179.3-201ENST00000604976 235 ntBASIC4.37□□□□□ -1.71
TRIM35Q9UPQ4 MIR1297-201ENST00000637311 77 ntBASIC4.37□□□□□ -1.71
TRIM35Q9UPQ4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM35Q9UPQ4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM35Q9UPQ4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM35Q9UPQ4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM35Q9UPQ4 RNU5F-1-201ENST00000362507 117 ntBASIC4.36□□□□□ -1.71
TRIM35Q9UPQ4 SNORA1.2-201ENST00000365189 134 ntBASIC4.36□□□□□ -1.71
TRIM35Q9UPQ4 RNU6-1083P-201ENST00000384022 107 ntBASIC4.36□□□□□ -1.71
TRIM35Q9UPQ4 RNU6-163P-201ENST00000384396 106 ntBASIC4.36□□□□□ -1.71
TRIM35Q9UPQ4 RNU6-587P-201ENST00000391282 106 ntBASIC4.36□□□□□ -1.71
TRIM35Q9UPQ4 AL161788.1-201ENST00000441805 169 ntBASIC4.36□□□□□ -1.71
TRIM35Q9UPQ4 MTND5P40-201ENST00000559945 246 ntBASIC4.36□□□□□ -1.71
TRIM35Q9UPQ4 MIR4484-201ENST00000582855 83 ntBASIC4.36□□□□□ -1.71
TRIM35Q9UPQ4 MIR4276-201ENST00000584832 70 ntBASIC4.36□□□□□ -1.71
TRIM35Q9UPQ4 MIR7112-201ENST00000616126 65 ntBASIC4.36□□□□□ -1.71
TRIM35Q9UPQ4 PWAR6-201ENST00000552334 4618 ntBASIC4.36□□□□□ -1.71
TRIM35Q9UPQ4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM35Q9UPQ4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM35Q9UPQ4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM35Q9UPQ4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM35Q9UPQ4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM35Q9UPQ4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM35Q9UPQ4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM35Q9UPQ4 RNA5SP229-201ENST00000410809 99 ntBASIC4.35□□□□□ -1.71
TRIM35Q9UPQ4 RNU6-1190P-201ENST00000410811 104 ntBASIC4.35□□□□□ -1.71
TRIM35Q9UPQ4 RNA5SP120-201ENST00000410900 112 ntBASIC4.35□□□□□ -1.71
TRIM35Q9UPQ4 AC015922.2-201ENST00000435593 184 ntBASIC4.35□□□□□ -1.71
TRIM35Q9UPQ4 HMGN2P16-201ENST00000456802 261 ntBASIC4.35□□□□□ -1.71
TRIM35Q9UPQ4 TRBV12-1-201ENST00000479785 344 ntBASIC4.35□□□□□ -1.71
TRIM35Q9UPQ4 RNU6-1108P-201ENST00000516308 104 ntBASIC4.35□□□□□ -1.71
TRIM35Q9UPQ4 RNU7-35P-201ENST00000517174 62 ntBASIC4.35□□□□□ -1.71
TRIM35Q9UPQ4 MIR4796-201ENST00000580742 81 ntBASIC4.35□□□□□ -1.71
TRIM35Q9UPQ4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM35Q9UPQ4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM35Q9UPQ4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.34□□□□□ -1.71
TRIM35Q9UPQ4 SNORD46.1-201ENST00000364139 104 ntBASIC4.34□□□□□ -1.71
TRIM35Q9UPQ4 RNA5SP72-201ENST00000364442 117 ntBASIC4.34□□□□□ -1.71
TRIM35Q9UPQ4 RNU6-1279P-201ENST00000383917 103 ntBASIC4.34□□□□□ -1.71
TRIM35Q9UPQ4 MIR767-201ENST00000390228 109 ntBASIC4.34□□□□□ -1.71
TRIM35Q9UPQ4 AC093423.1-201ENST00000440817 142 ntBASIC4.34□□□□□ -1.71
TRIM35Q9UPQ4 RNU7-67P-201ENST00000459003 62 ntBASIC4.34□□□□□ -1.71
TRIM35Q9UPQ4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM35Q9UPQ4 MIR4791-201ENST00000607666 84 ntBASIC4.34□□□□□ -1.71
TRIM35Q9UPQ4 uc_338.32-201ENST00000615087 172 ntBASIC4.34□□□□□ -1.71
TRIM35Q9UPQ4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM35Q9UPQ4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM35Q9UPQ4 Y_RNA.508-201ENST00000384502 114 ntBASIC4.33□□□□□ -1.72
TRIM35Q9UPQ4 SRIP3-201ENST00000413200 219 ntBASIC4.33□□□□□ -1.72
TRIM35Q9UPQ4 CST9LP2-201ENST00000437612 320 ntBASIC4.33□□□□□ -1.72
TRIM35Q9UPQ4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM35Q9UPQ4 RN7SL297P-201ENST00000483161 293 ntBASIC4.33□□□□□ -1.72
TRIM35Q9UPQ4 NDUFB9P3-201ENST00000521269 501 ntBASIC4.33□□□□□ -1.72
TRIM35Q9UPQ4 MIR8058-201ENST00000615737 89 ntBASIC4.33□□□□□ -1.72
TRIM35Q9UPQ4 AC027279.3-201ENST00000625055 122 ntBASIC4.33□□□□□ -1.72
TRIM35Q9UPQ4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
TRIM35Q9UPQ4 TNPO1P3-201ENST00000436471 2662 ntBASIC4.33□□□□□ -1.72
TRIM35Q9UPQ4 Z83843.1-201ENST00000604070 3685 ntBASIC4.33□□□□□ -1.72
TRIM35Q9UPQ4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM35Q9UPQ4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
TRIM35Q9UPQ4 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM35Q9UPQ4 RNU6-342P-201ENST00000384521 104 ntBASIC4.32□□□□□ -1.72
TRIM35Q9UPQ4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TRIM35Q9UPQ4 RNU6-447P-201ENST00000410293 104 ntBASIC4.32□□□□□ -1.72
TRIM35Q9UPQ4 RNU6-1118P-201ENST00000410382 104 ntBASIC4.32□□□□□ -1.72
TRIM35Q9UPQ4 RNU6-1076P-201ENST00000410397 104 ntBASIC4.32□□□□□ -1.72
TRIM35Q9UPQ4 RNU6-355P-201ENST00000410427 104 ntBASIC4.32□□□□□ -1.72
TRIM35Q9UPQ4 RNU6-791P-201ENST00000410467 104 ntBASIC4.32□□□□□ -1.72
TRIM35Q9UPQ4 RNU6-705P-201ENST00000410601 104 ntBASIC4.32□□□□□ -1.72
TRIM35Q9UPQ4 RNU6-1100P-201ENST00000410691 104 ntBASIC4.32□□□□□ -1.72
TRIM35Q9UPQ4 RNU6-860P-201ENST00000410860 104 ntBASIC4.32□□□□□ -1.72
TRIM35Q9UPQ4 RNU6-1217P-201ENST00000411276 104 ntBASIC4.32□□□□□ -1.72
TRIM35Q9UPQ4 RNU6-785P-201ENST00000411324 104 ntBASIC4.32□□□□□ -1.72
TRIM35Q9UPQ4 RNU6-1116P-201ENST00000517269 99 ntBASIC4.32□□□□□ -1.72
TRIM35Q9UPQ4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM35Q9UPQ4 AL020996.3-201ENST00000606617 222 ntBASIC4.32□□□□□ -1.72
TRIM35Q9UPQ4 U6.90-201ENST00000614007 104 ntBASIC4.32□□□□□ -1.72
TRIM35Q9UPQ4 U6.70-201ENST00000620287 104 ntBASIC4.32□□□□□ -1.72
TRIM35Q9UPQ4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM35Q9UPQ4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM35Q9UPQ4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM35Q9UPQ4 RNA5SP387-201ENST00000364226 106 ntBASIC4.31□□□□□ -1.72
TRIM35Q9UPQ4 Y_RNA.370-201ENST00000365589 108 ntBASIC4.31□□□□□ -1.72
TRIM35Q9UPQ4 RNU6-1321P-201ENST00000390905 107 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 209.3 ms