Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.39□□□□□ -2.35
NUP50Q9UKX7 Y_RNA.599-201ENST00000410489 109 ntBASIC0.39□□□□□ -2.35
NUP50Q9UKX7 RNU7-4P-201ENST00000516961 62 ntBASIC0.39□□□□□ -2.35
NUP50Q9UKX7 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.39□□□□□ -2.35
NUP50Q9UKX7 AL355073.2-201ENST00000612106 557 ntBASIC0.39□□□□□ -2.35
NUP50Q9UKX7 AC243829.6-201ENST00000612652 106 ntBASIC0.39□□□□□ -2.35
NUP50Q9UKX7 Y_RNA.329-201ENST00000365209 107 ntBASIC0.38□□□□□ -2.35
NUP50Q9UKX7 RNU6-1323P-201ENST00000384025 107 ntBASIC0.38□□□□□ -2.35
NUP50Q9UKX7 RNU6-767P-201ENST00000384132 107 ntBASIC0.38□□□□□ -2.35
NUP50Q9UKX7 RNU6-370P-201ENST00000411008 104 ntBASIC0.38□□□□□ -2.35
NUP50Q9UKX7 MCFD2P1-201ENST00000417812 300 ntBASIC0.38□□□□□ -2.35
NUP50Q9UKX7 AC244023.1-201ENST00000426884 112 ntBASIC0.38□□□□□ -2.35
NUP50Q9UKX7 RNU7-169P-201ENST00000459456 61 ntBASIC0.38□□□□□ -2.35
NUP50Q9UKX7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.38□□□□□ -2.35
NUP50Q9UKX7 RNU6-264P-201ENST00000517134 104 ntBASIC0.38□□□□□ -2.35
NUP50Q9UKX7 AL355375.2-201ENST00000574825 175 ntBASIC0.38□□□□□ -2.35
NUP50Q9UKX7 MIR4659A-201ENST00000580269 81 ntBASIC0.38□□□□□ -2.35
NUP50Q9UKX7 AC104695.3-201ENST00000604052 296 ntBASIC0.38□□□□□ -2.35
NUP50Q9UKX7 AC242498.1-201ENST00000604134 111 ntBASIC0.38□□□□□ -2.35
NUP50Q9UKX7 AC022441.3-201ENST00000605737 136 ntBASIC0.38□□□□□ -2.35
NUP50Q9UKX7 AC093783.1-201ENST00000612976 329 ntBASIC0.38□□□□□ -2.35
NUP50Q9UKX7 AC243994.1-201ENST00000618627 109 ntBASIC0.38□□□□□ -2.35
NUP50Q9UKX7 AC098679.4-201ENST00000624241 654 ntBASIC0.38□□□□□ -2.35
NUP50Q9UKX7 MIR924-201ENST00000638017 53 ntBASIC0.38□□□□□ -2.35
NUP50Q9UKX7 AC073869.6-201ENST00000640656 341 ntBASIC0.38□□□□□ -2.35
NUP50Q9UKX7 RNU6-1188P-201ENST00000363795 107 ntBASIC0.37□□□□□ -2.35
NUP50Q9UKX7 Y_RNA.230-201ENST00000364348 109 ntBASIC0.37□□□□□ -2.35
NUP50Q9UKX7 RNU6-890P-201ENST00000384121 107 ntBASIC0.37□□□□□ -2.35
NUP50Q9UKX7 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
NUP50Q9UKX7 RNU6-855P-201ENST00000410395 104 ntBASIC0.37□□□□□ -2.35
NUP50Q9UKX7 MTND1P2-201ENST00000430604 821 ntBASIC0.37□□□□□ -2.35
NUP50Q9UKX7 SNRPGP14-201ENST00000435400 219 ntBASIC0.37□□□□□ -2.35
NUP50Q9UKX7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.37□□□□□ -2.35
NUP50Q9UKX7 Y_RNA.635-201ENST00000459041 101 ntBASIC0.37□□□□□ -2.35
NUP50Q9UKX7 RN7SKP12-201ENST00000516275 143 ntBASIC0.37□□□□□ -2.35
NUP50Q9UKX7 MIR2115-201ENST00000516657 100 ntBASIC0.37□□□□□ -2.35
NUP50Q9UKX7 AC144568.1-201ENST00000520139 137 ntBASIC0.37□□□□□ -2.35
NUP50Q9UKX7 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.37□□□□□ -2.35
NUP50Q9UKX7 AC091925.1-201ENST00000623204 462 ntBASIC0.37□□□□□ -2.35
NUP50Q9UKX7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
NUP50Q9UKX7 RNU6-369P-201ENST00000362515 102 ntBASIC0.36□□□□□ -2.35
NUP50Q9UKX7 Y_RNA.168-201ENST00000363740 102 ntBASIC0.36□□□□□ -2.35
NUP50Q9UKX7 Y_RNA.203-201ENST00000364106 102 ntBASIC0.36□□□□□ -2.35
NUP50Q9UKX7 Y_RNA.310-201ENST00000365063 113 ntBASIC0.36□□□□□ -2.35
NUP50Q9UKX7 Y_RNA.370-201ENST00000365589 108 ntBASIC0.36□□□□□ -2.35
NUP50Q9UKX7 VTRNA1-3-201ENST00000365645 89 ntBASIC0.36□□□□□ -2.35
NUP50Q9UKX7 SNORD38C-201ENST00000384381 69 ntBASIC0.36□□□□□ -2.35
NUP50Q9UKX7 MTCO2P12-201ENST00000427426 682 ntBASIC0.36□□□□□ -2.35
NUP50Q9UKX7 PRDX4P1-201ENST00000507189 574 ntBASIC0.36□□□□□ -2.35
NUP50Q9UKX7 RNU6-830P-201ENST00000516353 107 ntBASIC0.36□□□□□ -2.35
NUP50Q9UKX7 U6.92-201ENST00000636464 89 ntBASIC0.36□□□□□ -2.35
NUP50Q9UKX7 RNU6-845P-201ENST00000362578 103 ntBASIC0.35□□□□□ -2.35
NUP50Q9UKX7 Y_RNA.166-201ENST00000363730 102 ntBASIC0.35□□□□□ -2.35
NUP50Q9UKX7 RNU6-708P-201ENST00000384217 107 ntBASIC0.35□□□□□ -2.35
NUP50Q9UKX7 MIR140-201ENST00000385282 100 ntBASIC0.35□□□□□ -2.35
NUP50Q9UKX7 RNU6-177P-201ENST00000411257 104 ntBASIC0.35□□□□□ -2.35
NUP50Q9UKX7 PDCL2P1-201ENST00000419302 352 ntBASIC0.35□□□□□ -2.35
NUP50Q9UKX7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.35□□□□□ -2.35
NUP50Q9UKX7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.35□□□□□ -2.35
NUP50Q9UKX7 SNORA68.3-201ENST00000515906 83 ntBASIC0.35□□□□□ -2.35
NUP50Q9UKX7 RN7SKP295-201ENST00000517264 153 ntBASIC0.35□□□□□ -2.35
NUP50Q9UKX7 AC087685.1-201ENST00000587507 141 ntBASIC0.35□□□□□ -2.35
NUP50Q9UKX7 POLR3GP1-201ENST00000594073 261 ntBASIC0.35□□□□□ -2.35
NUP50Q9UKX7 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.35□□□□□ -2.35
NUP50Q9UKX7 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.35□□□□□ -2.35
NUP50Q9UKX7 U2.1-201ENST00000618978 145 ntBASIC0.35□□□□□ -2.35
NUP50Q9UKX7 AC138305.3-201ENST00000624988 240 ntBASIC0.35□□□□□ -2.35
NUP50Q9UKX7 TPTEP1-208ENST00000636884 213 ntBASIC0.35□□□□□ -2.35
NUP50Q9UKX7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
NUP50Q9UKX7 Y_RNA.279-201ENST00000364763 95 ntBASIC0.34□□□□□ -2.36
NUP50Q9UKX7 Y_RNA.341-201ENST00000365341 102 ntBASIC0.34□□□□□ -2.36
NUP50Q9UKX7 RNU6-396P-201ENST00000365369 105 ntBASIC0.34□□□□□ -2.36
NUP50Q9UKX7 Y_RNA.570-201ENST00000384750 101 ntBASIC0.34□□□□□ -2.36
NUP50Q9UKX7 AL590004.1-201ENST00000405321 300 ntBASIC0.34□□□□□ -2.36
NUP50Q9UKX7 RNU6-710P-201ENST00000410424 105 ntBASIC0.34□□□□□ -2.36
NUP50Q9UKX7 Y_RNA.605-201ENST00000410577 105 ntBASIC0.34□□□□□ -2.36
NUP50Q9UKX7 MTND1P34-201ENST00000438556 671 ntBASIC0.34□□□□□ -2.36
NUP50Q9UKX7 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.34□□□□□ -2.36
NUP50Q9UKX7 NDUFA4P2-201ENST00000489989 244 ntBASIC0.34□□□□□ -2.36
NUP50Q9UKX7 AC091951.2-201ENST00000500762 203 ntBASIC0.34□□□□□ -2.36
NUP50Q9UKX7 RNU6-470P-201ENST00000515954 104 ntBASIC0.34□□□□□ -2.36
NUP50Q9UKX7 RNU7-116P-201ENST00000516940 62 ntBASIC0.34□□□□□ -2.36
NUP50Q9UKX7 AP003357.1-201ENST00000604497 148 ntBASIC0.34□□□□□ -2.36
NUP50Q9UKX7 Pinc.1-201ENST00000616452 154 ntBASIC0.34□□□□□ -2.36
NUP50Q9UKX7 RNU6-1209P-201ENST00000363655 107 ntBASIC0.33□□□□□ -2.36
NUP50Q9UKX7 RNU6-268P-201ENST00000364174 107 ntBASIC0.33□□□□□ -2.36
NUP50Q9UKX7 RNU6-1175P-201ENST00000365200 107 ntBASIC0.33□□□□□ -2.36
NUP50Q9UKX7 RNU6-442P-201ENST00000383968 104 ntBASIC0.33□□□□□ -2.36
NUP50Q9UKX7 MIR573-201ENST00000384964 99 ntBASIC0.33□□□□□ -2.36
NUP50Q9UKX7 U8.17-201ENST00000391292 132 ntBASIC0.33□□□□□ -2.36
NUP50Q9UKX7 AF228730.4-201ENST00000421457 183 ntBASIC0.33□□□□□ -2.36
NUP50Q9UKX7 AC005042.3-201ENST00000453230 174 ntBASIC0.33□□□□□ -2.36
NUP50Q9UKX7 snoU13.21-201ENST00000459368 105 ntBASIC0.33□□□□□ -2.36
NUP50Q9UKX7 HMGN1P10-201ENST00000474557 553 ntBASIC0.33□□□□□ -2.36
NUP50Q9UKX7 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.33□□□□□ -2.36
NUP50Q9UKX7 AC024405.2-202ENST00000532731 184 ntBASIC0.33□□□□□ -2.36
NUP50Q9UKX7 MIR548AO-201ENST00000579992 96 ntBASIC0.33□□□□□ -2.36
NUP50Q9UKX7 MIR4423-201ENST00000580922 80 ntBASIC0.33□□□□□ -2.36
NUP50Q9UKX7 AC022306.2-201ENST00000617563 647 ntBASIC0.33□□□□□ -2.36
NUP50Q9UKX7 MIR330-201ENST00000362196 94 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms