Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 RNU6-718P-201ENST00000516166 105 ntBASIC0.49□□□□□ -2.33
CTNNA3Q9UI47 SNORA18.7-201ENST00000516910 131 ntBASIC0.49□□□□□ -2.33
CTNNA3Q9UI47 MIR5690-201ENST00000583739 73 ntBASIC0.49□□□□□ -2.33
CTNNA3Q9UI47 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.49□□□□□ -2.33
CTNNA3Q9UI47 AC098679.4-201ENST00000624241 654 ntBASIC0.49□□□□□ -2.33
CTNNA3Q9UI47 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
CTNNA3Q9UI47 RNU6-626P-201ENST00000363354 107 ntBASIC0.48□□□□□ -2.33
CTNNA3Q9UI47 Y_RNA.146-201ENST00000363549 102 ntBASIC0.48□□□□□ -2.33
CTNNA3Q9UI47 Y_RNA.172-201ENST00000363765 102 ntBASIC0.48□□□□□ -2.33
CTNNA3Q9UI47 RNU6-1188P-201ENST00000363795 107 ntBASIC0.48□□□□□ -2.33
CTNNA3Q9UI47 RNU6-20P-201ENST00000384106 107 ntBASIC0.48□□□□□ -2.33
CTNNA3Q9UI47 RNA5SP63-201ENST00000391225 112 ntBASIC0.48□□□□□ -2.33
CTNNA3Q9UI47 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.48□□□□□ -2.33
CTNNA3Q9UI47 MIR1827-201ENST00000408549 66 ntBASIC0.48□□□□□ -2.33
CTNNA3Q9UI47 MTND1P2-201ENST00000430604 821 ntBASIC0.48□□□□□ -2.33
CTNNA3Q9UI47 HMGN1P10-201ENST00000474557 553 ntBASIC0.48□□□□□ -2.33
CTNNA3Q9UI47 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.48□□□□□ -2.33
CTNNA3Q9UI47 AC069439.1-201ENST00000494739 167 ntBASIC0.48□□□□□ -2.33
CTNNA3Q9UI47 AC104695.3-201ENST00000604052 296 ntBASIC0.48□□□□□ -2.33
CTNNA3Q9UI47 AC093783.1-201ENST00000612976 329 ntBASIC0.48□□□□□ -2.33
CTNNA3Q9UI47 AC134026.1-201ENST00000623249 2239 ntBASIC0.48□□□□□ -2.33
CTNNA3Q9UI47 SNORA25.3-201ENST00000363205 127 ntBASIC0.47□□□□□ -2.33
CTNNA3Q9UI47 SNORD18A-201ENST00000363753 72 ntBASIC0.47□□□□□ -2.33
CTNNA3Q9UI47 Y_RNA.368-201ENST00000365547 113 ntBASIC0.47□□□□□ -2.33
CTNNA3Q9UI47 Y_RNA.456-201ENST00000384232 111 ntBASIC0.47□□□□□ -2.33
CTNNA3Q9UI47 AL390729.2-201ENST00000416137 156 ntBASIC0.47□□□□□ -2.33
CTNNA3Q9UI47 MCFD2P1-201ENST00000417812 300 ntBASIC0.47□□□□□ -2.33
CTNNA3Q9UI47 SNRPGP10-201ENST00000432323 225 ntBASIC0.47□□□□□ -2.33
CTNNA3Q9UI47 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.47□□□□□ -2.33
CTNNA3Q9UI47 Y_RNA.655-201ENST00000515919 96 ntBASIC0.47□□□□□ -2.33
CTNNA3Q9UI47 AL355375.2-201ENST00000574825 175 ntBASIC0.47□□□□□ -2.33
CTNNA3Q9UI47 MIR4423-201ENST00000580922 80 ntBASIC0.47□□□□□ -2.33
CTNNA3Q9UI47 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.47□□□□□ -2.33
CTNNA3Q9UI47 AC023932.2-201ENST00000603176 175 ntBASIC0.47□□□□□ -2.33
CTNNA3Q9UI47 MIR2909-201ENST00000617113 69 ntBASIC0.47□□□□□ -2.33
CTNNA3Q9UI47 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.47□□□□□ -2.33
CTNNA3Q9UI47 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
CTNNA3Q9UI47 Y_RNA.27-201ENST00000362540 103 ntBASIC0.46□□□□□ -2.34
CTNNA3Q9UI47 RNU6-1297P-201ENST00000384415 104 ntBASIC0.46□□□□□ -2.34
CTNNA3Q9UI47 RNU1-119P-201ENST00000391122 165 ntBASIC0.46□□□□□ -2.34
CTNNA3Q9UI47 FCF1P9-201ENST00000412546 282 ntBASIC0.46□□□□□ -2.34
CTNNA3Q9UI47 SNRPGP14-201ENST00000435400 219 ntBASIC0.46□□□□□ -2.34
CTNNA3Q9UI47 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.46□□□□□ -2.34
CTNNA3Q9UI47 RNU4-57P-201ENST00000515980 135 ntBASIC0.46□□□□□ -2.34
CTNNA3Q9UI47 RNU6-120P-201ENST00000516077 103 ntBASIC0.46□□□□□ -2.34
CTNNA3Q9UI47 RN7SKP12-201ENST00000516275 143 ntBASIC0.46□□□□□ -2.34
CTNNA3Q9UI47 MIR4514-201ENST00000581410 57 ntBASIC0.46□□□□□ -2.34
CTNNA3Q9UI47 AC010205.1-201ENST00000616668 449 ntBASIC0.46□□□□□ -2.34
CTNNA3Q9UI47 MIR4251-201ENST00000635819 61 ntBASIC0.46□□□□□ -2.34
CTNNA3Q9UI47 Y_RNA.168-201ENST00000363740 102 ntBASIC0.45□□□□□ -2.34
CTNNA3Q9UI47 Y_RNA.242-201ENST00000364473 110 ntBASIC0.45□□□□□ -2.34
CTNNA3Q9UI47 Y_RNA.310-201ENST00000365063 113 ntBASIC0.45□□□□□ -2.34
CTNNA3Q9UI47 RNU6-580P-201ENST00000365159 107 ntBASIC0.45□□□□□ -2.34
CTNNA3Q9UI47 Y_RNA.462-201ENST00000384268 102 ntBASIC0.45□□□□□ -2.34
CTNNA3Q9UI47 SNORD38C-201ENST00000384381 69 ntBASIC0.45□□□□□ -2.34
CTNNA3Q9UI47 RNU6-310P-201ENST00000384655 107 ntBASIC0.45□□□□□ -2.34
CTNNA3Q9UI47 RNU6-1237P-201ENST00000384777 107 ntBASIC0.45□□□□□ -2.34
CTNNA3Q9UI47 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.45□□□□□ -2.34
CTNNA3Q9UI47 Y_RNA.646-201ENST00000410980 101 ntBASIC0.45□□□□□ -2.34
CTNNA3Q9UI47 AC244098.3-201ENST00000424803 96 ntBASIC0.45□□□□□ -2.34
CTNNA3Q9UI47 AC244023.1-201ENST00000426884 112 ntBASIC0.45□□□□□ -2.34
CTNNA3Q9UI47 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.45□□□□□ -2.34
CTNNA3Q9UI47 RNU6-470P-201ENST00000515954 104 ntBASIC0.45□□□□□ -2.34
CTNNA3Q9UI47 RNU6-155P-201ENST00000516347 100 ntBASIC0.45□□□□□ -2.34
CTNNA3Q9UI47 RNU6-966P-201ENST00000516479 104 ntBASIC0.45□□□□□ -2.34
CTNNA3Q9UI47 MIR2115-201ENST00000516657 100 ntBASIC0.45□□□□□ -2.34
CTNNA3Q9UI47 RN7SKP295-201ENST00000517264 153 ntBASIC0.45□□□□□ -2.34
CTNNA3Q9UI47 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.45□□□□□ -2.34
CTNNA3Q9UI47 AC242498.1-201ENST00000604134 111 ntBASIC0.45□□□□□ -2.34
CTNNA3Q9UI47 AP003357.1-201ENST00000604497 148 ntBASIC0.45□□□□□ -2.34
CTNNA3Q9UI47 AC243994.1-201ENST00000618627 109 ntBASIC0.45□□□□□ -2.34
CTNNA3Q9UI47 AC138305.3-201ENST00000624988 240 ntBASIC0.45□□□□□ -2.34
CTNNA3Q9UI47 MIR6516-201ENST00000630554 81 ntBASIC0.45□□□□□ -2.34
CTNNA3Q9UI47 TPTEP1-208ENST00000636884 213 ntBASIC0.45□□□□□ -2.34
CTNNA3Q9UI47 MIR377-201ENST00000362145 69 ntBASIC0.44□□□□□ -2.34
CTNNA3Q9UI47 SNORD14E-201ENST00000364009 85 ntBASIC0.44□□□□□ -2.34
CTNNA3Q9UI47 Y_RNA.570-201ENST00000384750 101 ntBASIC0.44□□□□□ -2.34
CTNNA3Q9UI47 MT-TN-201ENST00000387400 73 ntBASIC0.44□□□□□ -2.34
CTNNA3Q9UI47 RNU6-994P-201ENST00000410507 111 ntBASIC0.44□□□□□ -2.34
CTNNA3Q9UI47 RNU2-70P-201ENST00000410718 179 ntBASIC0.44□□□□□ -2.34
CTNNA3Q9UI47 RNU4-14P-201ENST00000410858 122 ntBASIC0.44□□□□□ -2.34
CTNNA3Q9UI47 RNU6-1304P-201ENST00000411374 106 ntBASIC0.44□□□□□ -2.34
CTNNA3Q9UI47 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.44□□□□□ -2.34
CTNNA3Q9UI47 AC099799.1-201ENST00000439809 192 ntBASIC0.44□□□□□ -2.34
CTNNA3Q9UI47 RPL30P15-201ENST00000457129 321 ntBASIC0.44□□□□□ -2.34
CTNNA3Q9UI47 MIR4659A-201ENST00000580269 81 ntBASIC0.44□□□□□ -2.34
CTNNA3Q9UI47 MIR548AR-201ENST00000582191 57 ntBASIC0.44□□□□□ -2.34
CTNNA3Q9UI47 AC022306.2-201ENST00000617563 647 ntBASIC0.44□□□□□ -2.34
CTNNA3Q9UI47 SNORA36.2-201ENST00000384004 127 ntBASIC0.43□□□□□ -2.34
CTNNA3Q9UI47 Y_RNA.537-201ENST00000384626 109 ntBASIC0.43□□□□□ -2.34
CTNNA3Q9UI47 SNORD105-201ENST00000386910 85 ntBASIC0.43□□□□□ -2.34
CTNNA3Q9UI47 RNA5SP222-201ENST00000411039 105 ntBASIC0.43□□□□□ -2.34
CTNNA3Q9UI47 MLLT10P1-201ENST00000418346 262 ntBASIC0.43□□□□□ -2.34
CTNNA3Q9UI47 AC005042.3-201ENST00000453230 174 ntBASIC0.43□□□□□ -2.34
CTNNA3Q9UI47 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.43□□□□□ -2.34
CTNNA3Q9UI47 AC011195.1-201ENST00000578177 177 ntBASIC0.43□□□□□ -2.34
CTNNA3Q9UI47 MIR5188-201ENST00000583467 113 ntBASIC0.43□□□□□ -2.34
CTNNA3Q9UI47 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
CTNNA3Q9UI47 U2.1-201ENST00000618978 145 ntBASIC0.43□□□□□ -2.34
CTNNA3Q9UI47 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms