Protein–RNA interactions for Protein: Q9UHD1

CHORDC1, Cysteine and histidine-rich domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHORDC1Q9UHD1 MIR499A-201ENST00000384903 122 ntBASIC1.15□□□□□ -2.23
CHORDC1Q9UHD1 Y_RNA.645-201ENST00000391229 102 ntBASIC1.15□□□□□ -2.23
CHORDC1Q9UHD1 Y_RNA.631-201ENST00000459607 101 ntBASIC1.15□□□□□ -2.23
CHORDC1Q9UHD1 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.15□□□□□ -2.23
CHORDC1Q9UHD1 MIR3192-201ENST00000584920 77 ntBASIC1.15□□□□□ -2.23
CHORDC1Q9UHD1 MIR6504-201ENST00000613520 61 ntBASIC1.15□□□□□ -2.23
CHORDC1Q9UHD1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CHORDC1Q9UHD1 Y_RNA.28-201ENST00000362554 111 ntBASIC1.14□□□□□ -2.23
CHORDC1Q9UHD1 SNORD113-8-201ENST00000363497 74 ntBASIC1.14□□□□□ -2.23
CHORDC1Q9UHD1 Y_RNA.222-201ENST00000364264 102 ntBASIC1.14□□□□□ -2.23
CHORDC1Q9UHD1 RNU6-867P-201ENST00000364956 107 ntBASIC1.14□□□□□ -2.23
CHORDC1Q9UHD1 RNU6-102P-201ENST00000384485 104 ntBASIC1.14□□□□□ -2.23
CHORDC1Q9UHD1 Y_RNA.721-201ENST00000517207 102 ntBASIC1.14□□□□□ -2.23
CHORDC1Q9UHD1 AC136628.3-201ENST00000521868 290 ntBASIC1.14□□□□□ -2.23
CHORDC1Q9UHD1 AC005357.1-201ENST00000588399 301 ntBASIC1.14□□□□□ -2.23
CHORDC1Q9UHD1 SNORD114-21-201ENST00000606412 72 ntBASIC1.14□□□□□ -2.23
CHORDC1Q9UHD1 AC012676.2-201ENST00000619258 186 ntBASIC1.14□□□□□ -2.23
CHORDC1Q9UHD1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.14□□□□□ -2.23
CHORDC1Q9UHD1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CHORDC1Q9UHD1 Y_RNA.183-201ENST00000363882 113 ntBASIC1.13□□□□□ -2.23
CHORDC1Q9UHD1 RNU6-823P-201ENST00000391042 103 ntBASIC1.13□□□□□ -2.23
CHORDC1Q9UHD1 SNORA75.2-201ENST00000391138 150 ntBASIC1.13□□□□□ -2.23
CHORDC1Q9UHD1 SNORA75.3-201ENST00000391231 150 ntBASIC1.13□□□□□ -2.23
CHORDC1Q9UHD1 RNU6-101P-201ENST00000410323 104 ntBASIC1.13□□□□□ -2.23
CHORDC1Q9UHD1 snoU13.25-201ENST00000458945 104 ntBASIC1.13□□□□□ -2.23
CHORDC1Q9UHD1 RNU7-141P-201ENST00000459304 62 ntBASIC1.13□□□□□ -2.23
CHORDC1Q9UHD1 RNU6-437P-201ENST00000459408 95 ntBASIC1.13□□□□□ -2.23
CHORDC1Q9UHD1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.13□□□□□ -2.23
CHORDC1Q9UHD1 SNORA18.7-201ENST00000516910 131 ntBASIC1.13□□□□□ -2.23
CHORDC1Q9UHD1 MTND4P29-201ENST00000503122 1372 ntBASIC1.12□□□□□ -2.23
CHORDC1Q9UHD1 RNU6-1209P-201ENST00000363655 107 ntBASIC1.12□□□□□ -2.23
CHORDC1Q9UHD1 RNA5SP48-201ENST00000363969 126 ntBASIC1.12□□□□□ -2.23
CHORDC1Q9UHD1 SNORD114-22-201ENST00000365423 72 ntBASIC1.12□□□□□ -2.23
CHORDC1Q9UHD1 Y_RNA.394-201ENST00000383942 103 ntBASIC1.12□□□□□ -2.23
CHORDC1Q9UHD1 Y_RNA.418-201ENST00000384029 102 ntBASIC1.12□□□□□ -2.23
CHORDC1Q9UHD1 Y_RNA.535-201ENST00000384612 99 ntBASIC1.12□□□□□ -2.23
CHORDC1Q9UHD1 MIR802-201ENST00000390235 94 ntBASIC1.12□□□□□ -2.23
CHORDC1Q9UHD1 AC002429.1-201ENST00000437672 148 ntBASIC1.12□□□□□ -2.23
CHORDC1Q9UHD1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.12□□□□□ -2.23
CHORDC1Q9UHD1 HSPE1P25-201ENST00000455484 251 ntBASIC1.12□□□□□ -2.23
CHORDC1Q9UHD1 UBL5P1-201ENST00000507979 193 ntBASIC1.12□□□□□ -2.23
CHORDC1Q9UHD1 RNU7-43P-201ENST00000516554 64 ntBASIC1.12□□□□□ -2.23
CHORDC1Q9UHD1 RNU6-988P-201ENST00000519081 107 ntBASIC1.12□□□□□ -2.23
CHORDC1Q9UHD1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.12□□□□□ -2.23
CHORDC1Q9UHD1 MIR2681-201ENST00000581814 105 ntBASIC1.12□□□□□ -2.23
CHORDC1Q9UHD1 AC136443.5-201ENST00000603741 370 ntBASIC1.12□□□□□ -2.23
CHORDC1Q9UHD1 AC104695.3-201ENST00000604052 296 ntBASIC1.12□□□□□ -2.23
CHORDC1Q9UHD1 RNU4-90P-201ENST00000362773 141 ntBASIC1.11□□□□□ -2.23
CHORDC1Q9UHD1 Y_RNA.61-201ENST00000362835 102 ntBASIC1.11□□□□□ -2.23
CHORDC1Q9UHD1 Y_RNA.136-201ENST00000363444 102 ntBASIC1.11□□□□□ -2.23
CHORDC1Q9UHD1 RNU6-1048P-201ENST00000364054 107 ntBASIC1.11□□□□□ -2.23
CHORDC1Q9UHD1 Y_RNA.796-201ENST00000364268 102 ntBASIC1.11□□□□□ -2.23
CHORDC1Q9UHD1 Y_RNA.799-201ENST00000364992 102 ntBASIC1.11□□□□□ -2.23
CHORDC1Q9UHD1 RNU6-474P-201ENST00000384243 107 ntBASIC1.11□□□□□ -2.23
CHORDC1Q9UHD1 MIR520C-201ENST00000385005 87 ntBASIC1.11□□□□□ -2.23
CHORDC1Q9UHD1 MIR1252-201ENST00000408861 65 ntBASIC1.11□□□□□ -2.23
CHORDC1Q9UHD1 SNORA36B-201ENST00000410438 131 ntBASIC1.11□□□□□ -2.23
CHORDC1Q9UHD1 Y_RNA.602-201ENST00000410535 92 ntBASIC1.11□□□□□ -2.23
CHORDC1Q9UHD1 SNORD123-201ENST00000459473 70 ntBASIC1.11□□□□□ -2.23
CHORDC1Q9UHD1 NDUFA4P2-201ENST00000489989 244 ntBASIC1.11□□□□□ -2.23
CHORDC1Q9UHD1 RPS26P48-201ENST00000491713 339 ntBASIC1.11□□□□□ -2.23
CHORDC1Q9UHD1 RNU6-496P-201ENST00000516145 99 ntBASIC1.11□□□□□ -2.23
CHORDC1Q9UHD1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.11□□□□□ -2.23
CHORDC1Q9UHD1 HSPE1P19-201ENST00000603327 295 ntBASIC1.11□□□□□ -2.23
CHORDC1Q9UHD1 AC008163.1-202ENST00000636004 2889 ntBASIC1.1□□□□□ -2.23
CHORDC1Q9UHD1 AL391516.1-201ENST00000554380 2449 ntBASIC1.1□□□□□ -2.23
CHORDC1Q9UHD1 Y_RNA.389-201ENST00000383924 113 ntBASIC1.1□□□□□ -2.23
CHORDC1Q9UHD1 RNU6-442P-201ENST00000383968 104 ntBASIC1.1□□□□□ -2.23
CHORDC1Q9UHD1 SNORD38C-201ENST00000384381 69 ntBASIC1.1□□□□□ -2.23
CHORDC1Q9UHD1 SNORA26.5-201ENST00000391215 123 ntBASIC1.1□□□□□ -2.23
CHORDC1Q9UHD1 RNU2-14P-201ENST00000411053 191 ntBASIC1.1□□□□□ -2.23
CHORDC1Q9UHD1 RNU7-21P-201ENST00000459430 62 ntBASIC1.1□□□□□ -2.23
CHORDC1Q9UHD1 RNU7-41P-201ENST00000515917 61 ntBASIC1.1□□□□□ -2.23
CHORDC1Q9UHD1 RNU6-191P-201ENST00000516295 94 ntBASIC1.1□□□□□ -2.23
CHORDC1Q9UHD1 RNU6-897P-201ENST00000517135 105 ntBASIC1.1□□□□□ -2.23
CHORDC1Q9UHD1 MIR4764-201ENST00000580680 88 ntBASIC1.1□□□□□ -2.23
CHORDC1Q9UHD1 PRELID3BP2-201ENST00000605362 201 ntBASIC1.1□□□□□ -2.23
CHORDC1Q9UHD1 MIR103A2-201ENST00000362154 78 ntBASIC1.09□□□□□ -2.23
CHORDC1Q9UHD1 Y_RNA.128-201ENST00000363391 112 ntBASIC1.09□□□□□ -2.23
CHORDC1Q9UHD1 RNU6-801P-201ENST00000364087 105 ntBASIC1.09□□□□□ -2.23
CHORDC1Q9UHD1 SNORD115-46-201ENST00000390982 71 ntBASIC1.09□□□□□ -2.23
CHORDC1Q9UHD1 Y_RNA.581-201ENST00000391017 97 ntBASIC1.09□□□□□ -2.23
CHORDC1Q9UHD1 MIR548P-201ENST00000408336 84 ntBASIC1.09□□□□□ -2.23
CHORDC1Q9UHD1 RPS29P28-201ENST00000446439 141 ntBASIC1.09□□□□□ -2.23
CHORDC1Q9UHD1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.09□□□□□ -2.23
CHORDC1Q9UHD1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.09□□□□□ -2.23
CHORDC1Q9UHD1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.09□□□□□ -2.23
CHORDC1Q9UHD1 MIR4452-201ENST00000583004 71 ntBASIC1.09□□□□□ -2.23
CHORDC1Q9UHD1 AC134503.1-201ENST00000633048 54 ntBASIC1.09□□□□□ -2.23
CHORDC1Q9UHD1 AL442644.1-201ENST00000454390 3105 ntBASIC1.09□□□□□ -2.24
CHORDC1Q9UHD1 RNU6-674P-201ENST00000363831 107 ntBASIC1.08□□□□□ -2.24
CHORDC1Q9UHD1 Y_RNA.191-201ENST00000363972 113 ntBASIC1.08□□□□□ -2.24
CHORDC1Q9UHD1 Y_RNA.380-201ENST00000365663 111 ntBASIC1.08□□□□□ -2.24
CHORDC1Q9UHD1 MIR200A-201ENST00000384875 90 ntBASIC1.08□□□□□ -2.24
CHORDC1Q9UHD1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
CHORDC1Q9UHD1 RNU7-90P-201ENST00000459216 62 ntBASIC1.08□□□□□ -2.24
CHORDC1Q9UHD1 SNORD124-201ENST00000459577 104 ntBASIC1.08□□□□□ -2.24
CHORDC1Q9UHD1 Y_RNA.711-201ENST00000516993 102 ntBASIC1.08□□□□□ -2.24
CHORDC1Q9UHD1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.08□□□□□ -2.24
CHORDC1Q9UHD1 AC008507.4-201ENST00000585464 127 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 238.6 ms