Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RNU6-1213P-201ENST00000517075 94 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 SNORA74.3-201ENST00000517108 154 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 Y_RNA.718-201ENST00000517110 102 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.25□□□□□ -2.37
CCDC88CQ9P219 AC060780.3-201ENST00000589464 80 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.25□□□□□ -2.37
CCDC88CQ9P219 PISRT1.1-201ENST00000616930 107 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 RNU6-654P-201ENST00000364373 107 ntBASIC0.24□□□□□ -2.37
CCDC88CQ9P219 Y_RNA.253-201ENST00000364562 112 ntBASIC0.24□□□□□ -2.37
CCDC88CQ9P219 Y_RNA.537-201ENST00000384626 109 ntBASIC0.24□□□□□ -2.37
CCDC88CQ9P219 MT-TL1-201ENST00000386347 75 ntBASIC0.24□□□□□ -2.37
CCDC88CQ9P219 SNORD105-201ENST00000386910 85 ntBASIC0.24□□□□□ -2.37
CCDC88CQ9P219 MT-TT-201ENST00000387460 66 ntBASIC0.24□□□□□ -2.37
CCDC88CQ9P219 U8.17-201ENST00000391292 132 ntBASIC0.24□□□□□ -2.37
CCDC88CQ9P219 MIR190B-201ENST00000401119 79 ntBASIC0.24□□□□□ -2.37
CCDC88CQ9P219 RNA5SP127-201ENST00000411051 133 ntBASIC0.24□□□□□ -2.37
CCDC88CQ9P219 AF228730.4-201ENST00000421457 183 ntBASIC0.24□□□□□ -2.37
CCDC88CQ9P219 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.24□□□□□ -2.37
CCDC88CQ9P219 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.24□□□□□ -2.37
CCDC88CQ9P219 AC091179.3-201ENST00000474761 144 ntBASIC0.24□□□□□ -2.37
CCDC88CQ9P219 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.24□□□□□ -2.37
CCDC88CQ9P219 EIF1P4-201ENST00000572664 335 ntBASIC0.24□□□□□ -2.37
CCDC88CQ9P219 MIR4804-201ENST00000581683 73 ntBASIC0.24□□□□□ -2.37
CCDC88CQ9P219 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
CCDC88CQ9P219 MIR5188-201ENST00000583467 113 ntBASIC0.24□□□□□ -2.37
CCDC88CQ9P219 MIR6755-201ENST00000619993 66 ntBASIC0.24□□□□□ -2.37
CCDC88CQ9P219 AC022140.2-201ENST00000623500 188 ntBASIC0.24□□□□□ -2.37
CCDC88CQ9P219 RNU6-623P-201ENST00000363143 105 ntBASIC0.23□□□□□ -2.37
CCDC88CQ9P219 RNA5SP48-201ENST00000363969 126 ntBASIC0.23□□□□□ -2.37
CCDC88CQ9P219 RNY3P11-201ENST00000364153 102 ntBASIC0.23□□□□□ -2.37
CCDC88CQ9P219 Y_RNA.314-201ENST00000365114 102 ntBASIC0.23□□□□□ -2.37
CCDC88CQ9P219 SNORA2.2-201ENST00000365473 135 ntBASIC0.23□□□□□ -2.37
CCDC88CQ9P219 RNU6-364P-201ENST00000384387 107 ntBASIC0.23□□□□□ -2.37
CCDC88CQ9P219 MIR15B-201ENST00000385045 98 ntBASIC0.23□□□□□ -2.37
CCDC88CQ9P219 MIR522-201ENST00000385071 87 ntBASIC0.23□□□□□ -2.37
CCDC88CQ9P219 RNA5SP95-201ENST00000410319 137 ntBASIC0.23□□□□□ -2.37
CCDC88CQ9P219 Y_RNA.646-201ENST00000410980 101 ntBASIC0.23□□□□□ -2.37
CCDC88CQ9P219 FCF1P9-201ENST00000412546 282 ntBASIC0.23□□□□□ -2.37
CCDC88CQ9P219 UQCRBP2-201ENST00000447827 297 ntBASIC0.23□□□□□ -2.37
CCDC88CQ9P219 RNU6-699P-201ENST00000517081 110 ntBASIC0.23□□□□□ -2.37
CCDC88CQ9P219 AL132765.2-201ENST00000610812 351 ntBASIC0.23□□□□□ -2.37
CCDC88CQ9P219 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.23□□□□□ -2.37
CCDC88CQ9P219 RNU4-45P-201ENST00000365469 141 ntBASIC0.23□□□□□ -2.37
CCDC88CQ9P219 RNU6-1310P-201ENST00000384153 107 ntBASIC0.23□□□□□ -2.37
CCDC88CQ9P219 SNORA50A-201ENST00000384225 134 ntBASIC0.23□□□□□ -2.37
CCDC88CQ9P219 MIR548K-201ENST00000408406 116 ntBASIC0.23□□□□□ -2.37
CCDC88CQ9P219 MIR4514-201ENST00000581410 57 ntBASIC0.23□□□□□ -2.37
CCDC88CQ9P219 AC125232.2-201ENST00000592457 143 ntBASIC0.23□□□□□ -2.37
CCDC88CQ9P219 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.23□□□□□ -2.37
CCDC88CQ9P219 AC067863.3-201ENST00000624172 122 ntBASIC0.23□□□□□ -2.37
CCDC88CQ9P219 MIR3688-2-201ENST00000636963 87 ntBASIC0.23□□□□□ -2.37
CCDC88CQ9P219 AC134026.1-201ENST00000623249 2239 ntBASIC0.22□□□□□ -2.37
CCDC88CQ9P219 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
CCDC88CQ9P219 Y_RNA.456-201ENST00000384232 111 ntBASIC0.22□□□□□ -2.37
CCDC88CQ9P219 Y_RNA.476-201ENST00000384347 108 ntBASIC0.22□□□□□ -2.37
CCDC88CQ9P219 Y_RNA.498-201ENST00000384460 102 ntBASIC0.22□□□□□ -2.37
CCDC88CQ9P219 MIR520H-201ENST00000385126 88 ntBASIC0.22□□□□□ -2.37
CCDC88CQ9P219 MTCO2P33-201ENST00000402100 465 ntBASIC0.22□□□□□ -2.37
CCDC88CQ9P219 MIR1277-201ENST00000408536 78 ntBASIC0.22□□□□□ -2.37
CCDC88CQ9P219 RNU2-14P-201ENST00000411053 191 ntBASIC0.22□□□□□ -2.37
CCDC88CQ9P219 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.22□□□□□ -2.37
CCDC88CQ9P219 Y_RNA.653-201ENST00000459091 95 ntBASIC0.22□□□□□ -2.37
CCDC88CQ9P219 RNU6-408P-201ENST00000515910 100 ntBASIC0.22□□□□□ -2.37
CCDC88CQ9P219 RNU6-277P-201ENST00000516272 106 ntBASIC0.22□□□□□ -2.37
CCDC88CQ9P219 RNU6-977P-201ENST00000516411 103 ntBASIC0.22□□□□□ -2.37
CCDC88CQ9P219 RNU7-149P-201ENST00000516739 59 ntBASIC0.22□□□□□ -2.37
CCDC88CQ9P219 AC007751.1-201ENST00000529260 376 ntBASIC0.22□□□□□ -2.37
CCDC88CQ9P219 AC023827.1-201ENST00000569247 97 ntBASIC0.22□□□□□ -2.37
CCDC88CQ9P219 MIR4264-201ENST00000583520 66 ntBASIC0.22□□□□□ -2.37
CCDC88CQ9P219 AC012433.1-201ENST00000588916 398 ntBASIC0.22□□□□□ -2.37
CCDC88CQ9P219 AP003357.1-201ENST00000604497 148 ntBASIC0.22□□□□□ -2.37
CCDC88CQ9P219 RBM11P1-201ENST00000604951 799 ntBASIC0.22□□□□□ -2.37
CCDC88CQ9P219 MIR8055-201ENST00000610739 97 ntBASIC0.22□□□□□ -2.37
CCDC88CQ9P219 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.22□□□□□ -2.37
CCDC88CQ9P219 MIR6759-201ENST00000638110 65 ntBASIC0.22□□□□□ -2.37
CCDC88CQ9P219 AC090625.1-201ENST00000357130 210 ntBASIC0.21□□□□□ -2.38
CCDC88CQ9P219 Y_RNA.341-201ENST00000365341 102 ntBASIC0.21□□□□□ -2.38
CCDC88CQ9P219 SNORA36.2-201ENST00000384004 127 ntBASIC0.21□□□□□ -2.38
CCDC88CQ9P219 RNU6-20P-201ENST00000384106 107 ntBASIC0.21□□□□□ -2.38
CCDC88CQ9P219 MIR140-201ENST00000385282 100 ntBASIC0.21□□□□□ -2.38
CCDC88CQ9P219 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.21□□□□□ -2.38
CCDC88CQ9P219 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.21□□□□□ -2.38
CCDC88CQ9P219 Y_RNA.655-201ENST00000515919 96 ntBASIC0.21□□□□□ -2.38
CCDC88CQ9P219 Y_RNA.708-201ENST00000516950 96 ntBASIC0.21□□□□□ -2.38
CCDC88CQ9P219 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.21□□□□□ -2.38
CCDC88CQ9P219 AC011195.1-201ENST00000578177 177 ntBASIC0.21□□□□□ -2.38
CCDC88CQ9P219 MIR5589-201ENST00000579442 60 ntBASIC0.21□□□□□ -2.38
CCDC88CQ9P219 JPX_2.1-201ENST00000614161 69 ntBASIC0.21□□□□□ -2.38
CCDC88CQ9P219 AC022306.2-201ENST00000617563 647 ntBASIC0.21□□□□□ -2.38
CCDC88CQ9P219 MIR6516-201ENST00000630554 81 ntBASIC0.21□□□□□ -2.38
CCDC88CQ9P219 Y_RNA.383-201ENST00000383855 97 ntBASIC0.21□□□□□ -2.38
CCDC88CQ9P219 RNU6-945P-201ENST00000383947 107 ntBASIC0.21□□□□□ -2.38
CCDC88CQ9P219 RNU2-61P-201ENST00000411069 191 ntBASIC0.21□□□□□ -2.38
CCDC88CQ9P219 CHEK2P4-201ENST00000450340 246 ntBASIC0.21□□□□□ -2.38
CCDC88CQ9P219 AC107399.1-201ENST00000451226 265 ntBASIC0.21□□□□□ -2.38
CCDC88CQ9P219 snoU13.2-201ENST00000459201 104 ntBASIC0.21□□□□□ -2.38
CCDC88CQ9P219 RNU7-141P-201ENST00000459304 62 ntBASIC0.21□□□□□ -2.38
CCDC88CQ9P219 RNU6-693P-201ENST00000516134 107 ntBASIC0.21□□□□□ -2.38
CCDC88CQ9P219 RNU7-115P-201ENST00000516433 55 ntBASIC0.21□□□□□ -2.38
CCDC88CQ9P219 AC144568.1-201ENST00000520139 137 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms