Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC107297.1-201ENST00000459991 176 ntBASIC-0.36□□□□□ -2.47
PHRF1Q9P1Y6 RNU7-181P-201ENST00000517234 74 ntBASIC-0.36□□□□□ -2.47
PHRF1Q9P1Y6 AL118558.2-201ENST00000556294 238 ntBASIC-0.36□□□□□ -2.47
PHRF1Q9P1Y6 AC040904.1-201ENST00000590850 223 ntBASIC-0.36□□□□□ -2.47
PHRF1Q9P1Y6 POLR3GP1-201ENST00000594073 261 ntBASIC-0.36□□□□□ -2.47
PHRF1Q9P1Y6 AC092447.9-201ENST00000603395 144 ntBASIC-0.36□□□□□ -2.47
PHRF1Q9P1Y6 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.36□□□□□ -2.47
PHRF1Q9P1Y6 MIR6828-201ENST00000636181 60 ntBASIC-0.36□□□□□ -2.47
PHRF1Q9P1Y6 AC091304.10-201ENST00000641554 121 ntBASIC-0.36□□□□□ -2.47
PHRF1Q9P1Y6 ZNF299P-201ENST00000406845 1804 ntBASIC-0.36□□□□□ -2.47
PHRF1Q9P1Y6 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.37□□□□□ -2.47
PHRF1Q9P1Y6 SNORD115-24-201ENST00000363528 82 ntBASIC-0.37□□□□□ -2.47
PHRF1Q9P1Y6 Y_RNA.201-201ENST00000364052 96 ntBASIC-0.37□□□□□ -2.47
PHRF1Q9P1Y6 RNU6-740P-201ENST00000364734 105 ntBASIC-0.37□□□□□ -2.47
PHRF1Q9P1Y6 SNORA51.10-201ENST00000384418 136 ntBASIC-0.37□□□□□ -2.47
PHRF1Q9P1Y6 RNU6-925P-201ENST00000384629 104 ntBASIC-0.37□□□□□ -2.47
PHRF1Q9P1Y6 SNORD37.1-201ENST00000390968 65 ntBASIC-0.37□□□□□ -2.47
PHRF1Q9P1Y6 MTCO2P19-201ENST00000427513 598 ntBASIC-0.37□□□□□ -2.47
PHRF1Q9P1Y6 RNU6-135P-201ENST00000516769 101 ntBASIC-0.37□□□□□ -2.47
PHRF1Q9P1Y6 AC124303.1-201ENST00000605703 360 ntBASIC-0.37□□□□□ -2.47
PHRF1Q9P1Y6 AC006441.5-201ENST00000612680 209 ntBASIC-0.37□□□□□ -2.47
PHRF1Q9P1Y6 MIR499B-201ENST00000636498 73 ntBASIC-0.37□□□□□ -2.47
PHRF1Q9P1Y6 RNU6-268P-201ENST00000364174 107 ntBASIC-0.38□□□□□ -2.47
PHRF1Q9P1Y6 SNORA72.3-201ENST00000365074 132 ntBASIC-0.38□□□□□ -2.47
PHRF1Q9P1Y6 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.38□□□□□ -2.47
PHRF1Q9P1Y6 MIR760-201ENST00000390220 80 ntBASIC-0.38□□□□□ -2.47
PHRF1Q9P1Y6 PCNPP3-201ENST00000393579 471 ntBASIC-0.38□□□□□ -2.47
PHRF1Q9P1Y6 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.38□□□□□ -2.47
PHRF1Q9P1Y6 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-0.38□□□□□ -2.47
PHRF1Q9P1Y6 SNRPGP14-201ENST00000435400 219 ntBASIC-0.38□□□□□ -2.47
PHRF1Q9P1Y6 RNU7-62P-201ENST00000458856 62 ntBASIC-0.38□□□□□ -2.47
PHRF1Q9P1Y6 AC133485.4-201ENST00000561835 220 ntBASIC-0.38□□□□□ -2.47
PHRF1Q9P1Y6 AC106754.1-201ENST00000562632 1513 ntBASIC-0.38□□□□□ -2.47
PHRF1Q9P1Y6 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.38□□□□□ -2.47
PHRF1Q9P1Y6 SNORD14E-201ENST00000364009 85 ntBASIC-0.38□□□□□ -2.47
PHRF1Q9P1Y6 SNORD14C-201ENST00000365382 88 ntBASIC-0.38□□□□□ -2.47
PHRF1Q9P1Y6 SNORA69-201ENST00000383895 132 ntBASIC-0.38□□□□□ -2.47
PHRF1Q9P1Y6 SNORA72-201ENST00000384339 132 ntBASIC-0.38□□□□□ -2.47
PHRF1Q9P1Y6 RNU6-127P-201ENST00000390897 107 ntBASIC-0.38□□□□□ -2.47
PHRF1Q9P1Y6 SNX3P1X-201ENST00000414887 175 ntBASIC-0.38□□□□□ -2.47
PHRF1Q9P1Y6 MTATP6P13-201ENST00000438531 667 ntBASIC-0.38□□□□□ -2.47
PHRF1Q9P1Y6 AC083904.1-201ENST00000487828 231 ntBASIC-0.38□□□□□ -2.47
PHRF1Q9P1Y6 RNU6-958P-201ENST00000516995 106 ntBASIC-0.38□□□□□ -2.47
PHRF1Q9P1Y6 MIR2355-201ENST00000517199 87 ntBASIC-0.38□□□□□ -2.47
PHRF1Q9P1Y6 MIR3672-201ENST00000584290 82 ntBASIC-0.38□□□□□ -2.47
PHRF1Q9P1Y6 AC006157.1-201ENST00000611750 366 ntBASIC-0.38□□□□□ -2.47
PHRF1Q9P1Y6 AC004467.1-201ENST00000615678 330 ntBASIC-0.38□□□□□ -2.47
PHRF1Q9P1Y6 MTND5P32-201ENST00000560711 1802 ntBASIC-0.39□□□□□ -2.47
PHRF1Q9P1Y6 SNORA24-201ENST00000384096 131 ntBASIC-0.39□□□□□ -2.47
PHRF1Q9P1Y6 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.39□□□□□ -2.47
PHRF1Q9P1Y6 MIR518F-201ENST00000384973 87 ntBASIC-0.39□□□□□ -2.47
PHRF1Q9P1Y6 RNU6-602P-201ENST00000411155 105 ntBASIC-0.39□□□□□ -2.47
PHRF1Q9P1Y6 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.39□□□□□ -2.47
PHRF1Q9P1Y6 USP9YP16-201ENST00000430287 407 ntBASIC-0.39□□□□□ -2.47
PHRF1Q9P1Y6 MTCO1P5-201ENST00000433573 344 ntBASIC-0.39□□□□□ -2.47
PHRF1Q9P1Y6 USP9YP23-201ENST00000455085 407 ntBASIC-0.39□□□□□ -2.47
PHRF1Q9P1Y6 RNY1P9-201ENST00000532431 109 ntBASIC-0.39□□□□□ -2.47
PHRF1Q9P1Y6 MIR5188-201ENST00000583467 113 ntBASIC-0.39□□□□□ -2.47
PHRF1Q9P1Y6 AC004223.4-201ENST00000612426 332 ntBASIC-0.39□□□□□ -2.47
PHRF1Q9P1Y6 Z69908.1-201ENST00000622603 247 ntBASIC-0.39□□□□□ -2.47
PHRF1Q9P1Y6 AC098679.4-201ENST00000624241 654 ntBASIC-0.39□□□□□ -2.47
PHRF1Q9P1Y6 SNORD115-41-201ENST00000363608 82 ntBASIC-0.4□□□□□ -2.47
PHRF1Q9P1Y6 Y_RNA.373-201ENST00000365600 103 ntBASIC-0.4□□□□□ -2.47
PHRF1Q9P1Y6 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.4□□□□□ -2.47
PHRF1Q9P1Y6 MIR635-201ENST00000384830 98 ntBASIC-0.4□□□□□ -2.47
PHRF1Q9P1Y6 MIR196A2-201ENST00000385189 110 ntBASIC-0.4□□□□□ -2.47
PHRF1Q9P1Y6 AC015818.7-201ENST00000428754 109 ntBASIC-0.4□□□□□ -2.47
PHRF1Q9P1Y6 AC087499.7-201ENST00000441958 109 ntBASIC-0.4□□□□□ -2.47
PHRF1Q9P1Y6 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-0.4□□□□□ -2.47
PHRF1Q9P1Y6 RNU6-625P-201ENST00000459412 107 ntBASIC-0.4□□□□□ -2.47
PHRF1Q9P1Y6 RNU7-116P-201ENST00000516940 62 ntBASIC-0.4□□□□□ -2.47
PHRF1Q9P1Y6 RNU6-232P-201ENST00000517144 64 ntBASIC-0.4□□□□□ -2.47
PHRF1Q9P1Y6 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.4□□□□□ -2.47
PHRF1Q9P1Y6 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.41□□□□□ -2.47
PHRF1Q9P1Y6 SNORA75.4-201ENST00000391278 119 ntBASIC-0.41□□□□□ -2.47
PHRF1Q9P1Y6 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.41□□□□□ -2.47
PHRF1Q9P1Y6 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.41□□□□□ -2.47
PHRF1Q9P1Y6 AC090844.1-201ENST00000422019 156 ntBASIC-0.41□□□□□ -2.47
PHRF1Q9P1Y6 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.41□□□□□ -2.47
PHRF1Q9P1Y6 RNU7-73P-201ENST00000458743 63 ntBASIC-0.41□□□□□ -2.47
PHRF1Q9P1Y6 RNU7-67P-201ENST00000459003 62 ntBASIC-0.41□□□□□ -2.47
PHRF1Q9P1Y6 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.41□□□□□ -2.47
PHRF1Q9P1Y6 RNU2-12P-201ENST00000517216 168 ntBASIC-0.41□□□□□ -2.47
PHRF1Q9P1Y6 AC007751.1-201ENST00000529260 376 ntBASIC-0.41□□□□□ -2.47
PHRF1Q9P1Y6 MTND1P24-201ENST00000552175 861 ntBASIC-0.41□□□□□ -2.47
PHRF1Q9P1Y6 ZNF519P2-201ENST00000557032 169 ntBASIC-0.41□□□□□ -2.47
PHRF1Q9P1Y6 MIR2681-201ENST00000581814 105 ntBASIC-0.41□□□□□ -2.47
PHRF1Q9P1Y6 Z94722.1-201ENST00000604328 474 ntBASIC-0.41□□□□□ -2.47
PHRF1Q9P1Y6 AC109347.2-201ENST00000610220 349 ntBASIC-0.41□□□□□ -2.47
PHRF1Q9P1Y6 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.41□□□□□ -2.47
PHRF1Q9P1Y6 JPX_2.1-201ENST00000614161 69 ntBASIC-0.41□□□□□ -2.47
PHRF1Q9P1Y6 MIR548AZ-201ENST00000616567 95 ntBASIC-0.41□□□□□ -2.47
PHRF1Q9P1Y6 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.42□□□□□ -2.48
PHRF1Q9P1Y6 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.42□□□□□ -2.48
PHRF1Q9P1Y6 RNU4-21P-201ENST00000362802 126 ntBASIC-0.42□□□□□ -2.48
PHRF1Q9P1Y6 Y_RNA.296-201ENST00000364930 108 ntBASIC-0.42□□□□□ -2.48
PHRF1Q9P1Y6 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.42□□□□□ -2.48
PHRF1Q9P1Y6 SNORD116-11-201ENST00000383882 92 ntBASIC-0.42□□□□□ -2.48
PHRF1Q9P1Y6 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.42□□□□□ -2.48
PHRF1Q9P1Y6 MT-TF-201ENST00000387314 71 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms