Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 BTF3P11-201ENST00000426582 477 ntBASIC-0.1□□□□□ -2.43
VAPAQ9P0L0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.1□□□□□ -2.43
VAPAQ9P0L0 SEPT7P4-201ENST00000437076 306 ntBASIC-0.1□□□□□ -2.43
VAPAQ9P0L0 MTND1P1-201ENST00000445453 368 ntBASIC-0.1□□□□□ -2.43
VAPAQ9P0L0 MTND5P5-201ENST00000503764 376 ntBASIC-0.1□□□□□ -2.43
VAPAQ9P0L0 RNU6-436P-201ENST00000516171 114 ntBASIC-0.1□□□□□ -2.43
VAPAQ9P0L0 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.1□□□□□ -2.43
VAPAQ9P0L0 SNORA18.4-201ENST00000516440 124 ntBASIC-0.1□□□□□ -2.43
VAPAQ9P0L0 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.1□□□□□ -2.43
VAPAQ9P0L0 MIR2355-201ENST00000517199 87 ntBASIC-0.1□□□□□ -2.43
VAPAQ9P0L0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.1□□□□□ -2.43
VAPAQ9P0L0 MIR3678-201ENST00000578455 94 ntBASIC-0.1□□□□□ -2.43
VAPAQ9P0L0 AC011712.1-201ENST00000588959 234 ntBASIC-0.1□□□□□ -2.43
VAPAQ9P0L0 AC104408.1-201ENST00000605241 170 ntBASIC-0.1□□□□□ -2.43
VAPAQ9P0L0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.1□□□□□ -2.43
VAPAQ9P0L0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.11□□□□□ -2.43
VAPAQ9P0L0 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.11□□□□□ -2.43
VAPAQ9P0L0 Y_RNA.301-201ENST00000364990 103 ntBASIC-0.11□□□□□ -2.43
VAPAQ9P0L0 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
VAPAQ9P0L0 RNU6-855P-201ENST00000410395 104 ntBASIC-0.11□□□□□ -2.43
VAPAQ9P0L0 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.11□□□□□ -2.43
VAPAQ9P0L0 AC090844.1-201ENST00000422019 156 ntBASIC-0.11□□□□□ -2.43
VAPAQ9P0L0 RNU7-102P-201ENST00000458948 62 ntBASIC-0.11□□□□□ -2.43
VAPAQ9P0L0 Y_RNA.682-201ENST00000516457 100 ntBASIC-0.11□□□□□ -2.43
VAPAQ9P0L0 RNU6-314P-201ENST00000516574 104 ntBASIC-0.11□□□□□ -2.43
VAPAQ9P0L0 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.11□□□□□ -2.43
VAPAQ9P0L0 AC109635.3-201ENST00000529536 185 ntBASIC-0.11□□□□□ -2.43
VAPAQ9P0L0 AC005176.2-201ENST00000596933 147 ntBASIC-0.11□□□□□ -2.43
VAPAQ9P0L0 uc_338.6-201ENST00000613544 171 ntBASIC-0.11□□□□□ -2.43
VAPAQ9P0L0 MIR330-201ENST00000362196 94 ntBASIC-0.12□□□□□ -2.43
VAPAQ9P0L0 RNA5SP117-201ENST00000365294 118 ntBASIC-0.12□□□□□ -2.43
VAPAQ9P0L0 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.12□□□□□ -2.43
VAPAQ9P0L0 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.12□□□□□ -2.43
VAPAQ9P0L0 RNU6-747P-201ENST00000390928 104 ntBASIC-0.12□□□□□ -2.43
VAPAQ9P0L0 RNU6-241P-201ENST00000391148 104 ntBASIC-0.12□□□□□ -2.43
VAPAQ9P0L0 RNU6-447P-201ENST00000410293 104 ntBASIC-0.12□□□□□ -2.43
VAPAQ9P0L0 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.12□□□□□ -2.43
VAPAQ9P0L0 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.12□□□□□ -2.43
VAPAQ9P0L0 RNU6-355P-201ENST00000410427 104 ntBASIC-0.12□□□□□ -2.43
VAPAQ9P0L0 RNU6-791P-201ENST00000410467 104 ntBASIC-0.12□□□□□ -2.43
VAPAQ9P0L0 RNU6-705P-201ENST00000410601 104 ntBASIC-0.12□□□□□ -2.43
VAPAQ9P0L0 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.12□□□□□ -2.43
VAPAQ9P0L0 RNU6-860P-201ENST00000410860 104 ntBASIC-0.12□□□□□ -2.43
VAPAQ9P0L0 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.12□□□□□ -2.43
VAPAQ9P0L0 RNU6-785P-201ENST00000411324 104 ntBASIC-0.12□□□□□ -2.43
VAPAQ9P0L0 MIR2053-201ENST00000459295 91 ntBASIC-0.12□□□□□ -2.43
VAPAQ9P0L0 RNA5SP227-201ENST00000516184 113 ntBASIC-0.12□□□□□ -2.43
VAPAQ9P0L0 MIR5190-201ENST00000581537 80 ntBASIC-0.12□□□□□ -2.43
VAPAQ9P0L0 POLR3GP1-201ENST00000594073 261 ntBASIC-0.12□□□□□ -2.43
VAPAQ9P0L0 U6.90-201ENST00000614007 104 ntBASIC-0.12□□□□□ -2.43
VAPAQ9P0L0 U6.70-201ENST00000620287 104 ntBASIC-0.12□□□□□ -2.43
VAPAQ9P0L0 AP000770.2-201ENST00000623694 100 ntBASIC-0.12□□□□□ -2.43
VAPAQ9P0L0 AC010332.2-201ENST00000613083 1904 ntBASIC-0.13□□□□□ -2.43
VAPAQ9P0L0 SNORD116-9-201ENST00000384000 95 ntBASIC-0.13□□□□□ -2.43
VAPAQ9P0L0 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.13□□□□□ -2.43
VAPAQ9P0L0 SNORD116-3-201ENST00000384287 95 ntBASIC-0.13□□□□□ -2.43
VAPAQ9P0L0 SNORD116-7-201ENST00000384404 95 ntBASIC-0.13□□□□□ -2.43
VAPAQ9P0L0 SNORD116-5-201ENST00000384462 95 ntBASIC-0.13□□□□□ -2.43
VAPAQ9P0L0 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-0.13□□□□□ -2.43
VAPAQ9P0L0 RPL7P42-201ENST00000481005 679 ntBASIC-0.13□□□□□ -2.43
VAPAQ9P0L0 RPL23AP54-201ENST00000495129 419 ntBASIC-0.13□□□□□ -2.43
VAPAQ9P0L0 RNU2-13P-201ENST00000515909 113 ntBASIC-0.13□□□□□ -2.43
VAPAQ9P0L0 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.13□□□□□ -2.43
VAPAQ9P0L0 RNU7-116P-201ENST00000516940 62 ntBASIC-0.13□□□□□ -2.43
VAPAQ9P0L0 MIR1273G-201ENST00000577677 100 ntBASIC-0.13□□□□□ -2.43
VAPAQ9P0L0 AC092794.2-201ENST00000620933 563 ntBASIC-0.13□□□□□ -2.43
VAPAQ9P0L0 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.14□□□□□ -2.43
VAPAQ9P0L0 RNA5SP63-201ENST00000391225 112 ntBASIC-0.14□□□□□ -2.43
VAPAQ9P0L0 MIR1197-201ENST00000408818 88 ntBASIC-0.14□□□□□ -2.43
VAPAQ9P0L0 RNU2-59P-201ENST00000410482 191 ntBASIC-0.14□□□□□ -2.43
VAPAQ9P0L0 AC091959.1-201ENST00000495857 238 ntBASIC-0.14□□□□□ -2.43
VAPAQ9P0L0 RNU6-966P-201ENST00000516479 104 ntBASIC-0.14□□□□□ -2.43
VAPAQ9P0L0 Y_RNA.708-201ENST00000516950 96 ntBASIC-0.14□□□□□ -2.43
VAPAQ9P0L0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.14□□□□□ -2.43
VAPAQ9P0L0 AC060780.3-201ENST00000589464 80 ntBASIC-0.14□□□□□ -2.43
VAPAQ9P0L0 MIR8087-201ENST00000612745 78 ntBASIC-0.14□□□□□ -2.43
VAPAQ9P0L0 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.14□□□□□ -2.43
VAPAQ9P0L0 AC098679.4-201ENST00000624241 654 ntBASIC-0.14□□□□□ -2.43
VAPAQ9P0L0 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.15□□□□□ -2.43
VAPAQ9P0L0 RNU6-716P-201ENST00000365621 103 ntBASIC-0.15□□□□□ -2.43
VAPAQ9P0L0 RNU6-20P-201ENST00000384106 107 ntBASIC-0.15□□□□□ -2.43
VAPAQ9P0L0 MIR125B2-201ENST00000385128 89 ntBASIC-0.15□□□□□ -2.43
VAPAQ9P0L0 MTND4P28-201ENST00000426217 387 ntBASIC-0.15□□□□□ -2.43
VAPAQ9P0L0 FCF1P4-201ENST00000448326 183 ntBASIC-0.15□□□□□ -2.43
VAPAQ9P0L0 RPL30P15-201ENST00000457129 321 ntBASIC-0.15□□□□□ -2.43
VAPAQ9P0L0 RNU4-49P-201ENST00000516080 140 ntBASIC-0.15□□□□□ -2.43
VAPAQ9P0L0 RNU7-156P-201ENST00000517214 74 ntBASIC-0.15□□□□□ -2.43
VAPAQ9P0L0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.15□□□□□ -2.43
VAPAQ9P0L0 AC133485.4-201ENST00000561835 220 ntBASIC-0.15□□□□□ -2.43
VAPAQ9P0L0 MIR4290-201ENST00000583807 95 ntBASIC-0.15□□□□□ -2.43
VAPAQ9P0L0 AC008507.4-201ENST00000585464 127 ntBASIC-0.15□□□□□ -2.43
VAPAQ9P0L0 AC245008.1-201ENST00000608123 476 ntBASIC-0.15□□□□□ -2.43
VAPAQ9P0L0 RNU6-626P-201ENST00000363354 107 ntBASIC-0.16□□□□□ -2.44
VAPAQ9P0L0 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.16□□□□□ -2.44
VAPAQ9P0L0 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.16□□□□□ -2.44
VAPAQ9P0L0 SNORA63C-201ENST00000364578 129 ntBASIC-0.16□□□□□ -2.44
VAPAQ9P0L0 RNU6-99P-201ENST00000364721 107 ntBASIC-0.16□□□□□ -2.44
VAPAQ9P0L0 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.16□□□□□ -2.44
VAPAQ9P0L0 RNU2-16P-201ENST00000410712 136 ntBASIC-0.16□□□□□ -2.44
VAPAQ9P0L0 AC236972.2-201ENST00000434979 310 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms