Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
LMCD1Q9NZU5 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.02□□□□□ -1.93
LMCD1Q9NZU5 ZNF658B-202ENST00000615961 3375 ntBASIC3.01□□□□□ -1.93
LMCD1Q9NZU5 Y_RNA.198-201ENST00000364013 98 ntBASIC3.01□□□□□ -1.93
LMCD1Q9NZU5 AL513477.1-202ENST00000417061 214 ntBASIC3.01□□□□□ -1.93
LMCD1Q9NZU5 RNA5SP57-201ENST00000459463 123 ntBASIC3.01□□□□□ -1.93
LMCD1Q9NZU5 RN7SL20P-201ENST00000488827 297 ntBASIC3.01□□□□□ -1.93
LMCD1Q9NZU5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.01□□□□□ -1.93
LMCD1Q9NZU5 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3□□□□□ -1.93
LMCD1Q9NZU5 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
LMCD1Q9NZU5 AC091564.4-201ENST00000533934 2194 ntBASIC3□□□□□ -1.93
LMCD1Q9NZU5 RNU6-486P-201ENST00000363116 107 ntBASIC3□□□□□ -1.93
LMCD1Q9NZU5 RNU6-1138P-201ENST00000365359 106 ntBASIC3□□□□□ -1.93
LMCD1Q9NZU5 MT-TI-201ENST00000387365 69 ntBASIC3□□□□□ -1.93
LMCD1Q9NZU5 AL117342.1-201ENST00000404861 406 ntBASIC3□□□□□ -1.93
LMCD1Q9NZU5 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3□□□□□ -1.93
LMCD1Q9NZU5 AP004217.1-201ENST00000480579 346 ntBASIC3□□□□□ -1.93
LMCD1Q9NZU5 RNU2-13P-201ENST00000515909 113 ntBASIC3□□□□□ -1.93
LMCD1Q9NZU5 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3□□□□□ -1.93
LMCD1Q9NZU5 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LMCD1Q9NZU5 RNU1-72P-201ENST00000362976 153 ntBASIC2.99□□□□□ -1.93
LMCD1Q9NZU5 RNY4P6-201ENST00000363667 96 ntBASIC2.99□□□□□ -1.93
LMCD1Q9NZU5 RNY1P1-201ENST00000364372 112 ntBASIC2.99□□□□□ -1.93
LMCD1Q9NZU5 Y_RNA.344-201ENST00000365381 112 ntBASIC2.99□□□□□ -1.93
LMCD1Q9NZU5 CD24P4-201ENST00000382840 243 ntBASIC2.99□□□□□ -1.93
LMCD1Q9NZU5 RNU6-675P-201ENST00000384236 104 ntBASIC2.99□□□□□ -1.93
LMCD1Q9NZU5 AC007064.1-201ENST00000412238 351 ntBASIC2.99□□□□□ -1.93
LMCD1Q9NZU5 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.99□□□□□ -1.93
LMCD1Q9NZU5 Z96811.1-201ENST00000445880 108 ntBASIC2.99□□□□□ -1.93
LMCD1Q9NZU5 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.99□□□□□ -1.93
LMCD1Q9NZU5 AC011406.1-201ENST00000512440 370 ntBASIC2.99□□□□□ -1.93
LMCD1Q9NZU5 RNU6-504P-201ENST00000516568 104 ntBASIC2.99□□□□□ -1.93
LMCD1Q9NZU5 RNU6-1096P-201ENST00000517089 102 ntBASIC2.99□□□□□ -1.93
LMCD1Q9NZU5 MIR4662B-201ENST00000579498 81 ntBASIC2.99□□□□□ -1.93
LMCD1Q9NZU5 AC007229.1-201ENST00000590455 412 ntBASIC2.99□□□□□ -1.93
LMCD1Q9NZU5 U6.73-201ENST00000619194 103 ntBASIC2.99□□□□□ -1.93
LMCD1Q9NZU5 CTSLP2-204ENST00000629029 392 ntBASIC2.99□□□□□ -1.93
LMCD1Q9NZU5 AC108206.1-201ENST00000570186 4159 ntBASIC2.99□□□□□ -1.93
LMCD1Q9NZU5 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LMCD1Q9NZU5 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.98□□□□□ -1.93
LMCD1Q9NZU5 MIR592-201ENST00000384959 97 ntBASIC2.98□□□□□ -1.93
LMCD1Q9NZU5 MIR218-1-201ENST00000384999 110 ntBASIC2.98□□□□□ -1.93
LMCD1Q9NZU5 MIR1253-201ENST00000408273 105 ntBASIC2.98□□□□□ -1.93
LMCD1Q9NZU5 snoU13.23-201ENST00000458863 104 ntBASIC2.98□□□□□ -1.93
LMCD1Q9NZU5 RNA5SP148-201ENST00000516527 94 ntBASIC2.98□□□□□ -1.93
LMCD1Q9NZU5 RNU6-826P-201ENST00000516827 104 ntBASIC2.98□□□□□ -1.93
LMCD1Q9NZU5 SCARNA15-202ENST00000516881 127 ntBASIC2.98□□□□□ -1.93
LMCD1Q9NZU5 RNU6-1270P-201ENST00000517128 108 ntBASIC2.98□□□□□ -1.93
LMCD1Q9NZU5 SCARNA11.3-201ENST00000517276 130 ntBASIC2.98□□□□□ -1.93
LMCD1Q9NZU5 AC084364.2-201ENST00000546924 395 ntBASIC2.98□□□□□ -1.93
LMCD1Q9NZU5 AC019288.1-201ENST00000557918 224 ntBASIC2.98□□□□□ -1.93
LMCD1Q9NZU5 AC090115.4-201ENST00000609970 188 ntBASIC2.98□□□□□ -1.93
LMCD1Q9NZU5 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LMCD1Q9NZU5 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.98□□□□□ -1.93
LMCD1Q9NZU5 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LMCD1Q9NZU5 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
LMCD1Q9NZU5 AP003122.5-201ENST00000527668 3766 ntBASIC2.97□□□□□ -1.93
LMCD1Q9NZU5 RNU1-112P-201ENST00000364401 164 ntBASIC2.97□□□□□ -1.93
LMCD1Q9NZU5 RNU6-979P-201ENST00000383896 107 ntBASIC2.97□□□□□ -1.93
LMCD1Q9NZU5 SNORD61-201ENST00000384252 73 ntBASIC2.97□□□□□ -1.93
LMCD1Q9NZU5 RNU6-242P-201ENST00000384359 107 ntBASIC2.97□□□□□ -1.93
LMCD1Q9NZU5 SNORA3.2-201ENST00000408221 125 ntBASIC2.97□□□□□ -1.93
LMCD1Q9NZU5 SNORD88.1-201ENST00000408684 91 ntBASIC2.97□□□□□ -1.93
LMCD1Q9NZU5 RNU6-1186P-201ENST00000410429 97 ntBASIC2.97□□□□□ -1.93
LMCD1Q9NZU5 AC233266.1-201ENST00000454518 96 ntBASIC2.97□□□□□ -1.93
LMCD1Q9NZU5 NDUFA4P2-201ENST00000489989 244 ntBASIC2.97□□□□□ -1.93
LMCD1Q9NZU5 MRPS17P9-201ENST00000511924 393 ntBASIC2.97□□□□□ -1.93
LMCD1Q9NZU5 RNU6-1018P-201ENST00000516577 106 ntBASIC2.97□□□□□ -1.93
LMCD1Q9NZU5 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.97□□□□□ -1.93
LMCD1Q9NZU5 MIR4666B-201ENST00000578142 81 ntBASIC2.97□□□□□ -1.93
LMCD1Q9NZU5 AC242852.1-201ENST00000612151 96 ntBASIC2.97□□□□□ -1.93
LMCD1Q9NZU5 AC244015.1-201ENST00000622301 99 ntBASIC2.97□□□□□ -1.93
LMCD1Q9NZU5 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.96□□□□□ -1.93
LMCD1Q9NZU5 RNU6-414P-201ENST00000363705 104 ntBASIC2.96□□□□□ -1.94
LMCD1Q9NZU5 Y_RNA.313-201ENST00000365095 103 ntBASIC2.96□□□□□ -1.94
LMCD1Q9NZU5 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.96□□□□□ -1.94
LMCD1Q9NZU5 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.96□□□□□ -1.94
LMCD1Q9NZU5 AL353689.1-201ENST00000438895 199 ntBASIC2.96□□□□□ -1.94
LMCD1Q9NZU5 RNY4P20-201ENST00000516678 93 ntBASIC2.96□□□□□ -1.94
LMCD1Q9NZU5 RNU6-126P-201ENST00000516685 103 ntBASIC2.96□□□□□ -1.94
LMCD1Q9NZU5 RNU6-1149P-201ENST00000516810 97 ntBASIC2.96□□□□□ -1.94
LMCD1Q9NZU5 AC004486.1-201ENST00000546846 233 ntBASIC2.96□□□□□ -1.94
LMCD1Q9NZU5 AC022254.1-201ENST00000567857 235 ntBASIC2.96□□□□□ -1.94
LMCD1Q9NZU5 IGLL4P-201ENST00000614590 133 ntBASIC2.96□□□□□ -1.94
LMCD1Q9NZU5 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
LMCD1Q9NZU5 AC009487.4-201ENST00000624969 3585 ntBASIC2.96□□□□□ -1.94
LMCD1Q9NZU5 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LMCD1Q9NZU5 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LMCD1Q9NZU5 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LMCD1Q9NZU5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LMCD1Q9NZU5 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
LMCD1Q9NZU5 SNORA25.6-201ENST00000364121 118 ntBASIC2.95□□□□□ -1.94
LMCD1Q9NZU5 SNORA4.2-201ENST00000365313 147 ntBASIC2.95□□□□□ -1.94
LMCD1Q9NZU5 AC018634.1-201ENST00000437554 401 ntBASIC2.95□□□□□ -1.94
LMCD1Q9NZU5 Y_RNA.666-201ENST00000516187 112 ntBASIC2.95□□□□□ -1.94
LMCD1Q9NZU5 MIR5588-201ENST00000581890 63 ntBASIC2.95□□□□□ -1.94
LMCD1Q9NZU5 AC073413.2-201ENST00000604332 360 ntBASIC2.95□□□□□ -1.94
LMCD1Q9NZU5 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
LMCD1Q9NZU5 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
LMCD1Q9NZU5 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms