Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 RNU6-268P-201ENST00000364174 107 ntBASIC2.61□□□□□ -1.99
UBP1Q9NZI7 SNORA1-201ENST00000384107 130 ntBASIC2.61□□□□□ -1.99
UBP1Q9NZI7 RNU6-163P-201ENST00000384396 106 ntBASIC2.61□□□□□ -1.99
UBP1Q9NZI7 RNU6-296P-201ENST00000384608 107 ntBASIC2.61□□□□□ -1.99
UBP1Q9NZI7 RNU6-1168P-201ENST00000390831 104 ntBASIC2.61□□□□□ -1.99
UBP1Q9NZI7 MIR548O-201ENST00000408583 114 ntBASIC2.61□□□□□ -1.99
UBP1Q9NZI7 AC108938.1-201ENST00000451204 136 ntBASIC2.61□□□□□ -1.99
UBP1Q9NZI7 RPL23AP94-201ENST00000512518 302 ntBASIC2.61□□□□□ -1.99
UBP1Q9NZI7 RNA5SP356-201ENST00000515972 94 ntBASIC2.61□□□□□ -1.99
UBP1Q9NZI7 Y_RNA.692-201ENST00000516627 105 ntBASIC2.61□□□□□ -1.99
UBP1Q9NZI7 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.61□□□□□ -1.99
UBP1Q9NZI7 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
UBP1Q9NZI7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
UBP1Q9NZI7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
UBP1Q9NZI7 MIRLET7C-201ENST00000362160 84 ntBASIC2.6□□□□□ -1.99
UBP1Q9NZI7 RNU6-80P-201ENST00000384195 107 ntBASIC2.6□□□□□ -1.99
UBP1Q9NZI7 Y_RNA.500-201ENST00000384466 111 ntBASIC2.6□□□□□ -1.99
UBP1Q9NZI7 RNU6-1031P-201ENST00000384773 107 ntBASIC2.6□□□□□ -1.99
UBP1Q9NZI7 MIR548A2-201ENST00000384956 97 ntBASIC2.6□□□□□ -1.99
UBP1Q9NZI7 MIR518F-201ENST00000384973 87 ntBASIC2.6□□□□□ -1.99
UBP1Q9NZI7 RNU6-1154P-201ENST00000391001 104 ntBASIC2.6□□□□□ -1.99
UBP1Q9NZI7 MIR891A-201ENST00000401237 79 ntBASIC2.6□□□□□ -1.99
UBP1Q9NZI7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.6□□□□□ -1.99
UBP1Q9NZI7 MTATP6P21-201ENST00000440681 189 ntBASIC2.6□□□□□ -1.99
UBP1Q9NZI7 RPL23AP63-201ENST00000498752 471 ntBASIC2.6□□□□□ -1.99
UBP1Q9NZI7 AC114811.1-201ENST00000507207 168 ntBASIC2.6□□□□□ -1.99
UBP1Q9NZI7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.6□□□□□ -1.99
UBP1Q9NZI7 RNA5SP282-201ENST00000516355 108 ntBASIC2.6□□□□□ -1.99
UBP1Q9NZI7 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.6□□□□□ -1.99
UBP1Q9NZI7 AC245884.12-201ENST00000615364 59 ntBASIC2.6□□□□□ -1.99
UBP1Q9NZI7 AC134878.1-201ENST00000619901 243 ntBASIC2.6□□□□□ -1.99
UBP1Q9NZI7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
UBP1Q9NZI7 U8.1-201ENST00000362843 134 ntBASIC2.59□□□□□ -1.99
UBP1Q9NZI7 Y_RNA.71-201ENST00000362892 104 ntBASIC2.59□□□□□ -1.99
UBP1Q9NZI7 SNORD116-14-201ENST00000383894 92 ntBASIC2.59□□□□□ -1.99
UBP1Q9NZI7 SNORD116-17-201ENST00000383929 92 ntBASIC2.59□□□□□ -1.99
UBP1Q9NZI7 Y_RNA.410-201ENST00000383992 113 ntBASIC2.59□□□□□ -1.99
UBP1Q9NZI7 SNORD116-15-201ENST00000384445 92 ntBASIC2.59□□□□□ -1.99
UBP1Q9NZI7 SNORD116-19-201ENST00000384729 92 ntBASIC2.59□□□□□ -1.99
UBP1Q9NZI7 MIR524-201ENST00000385242 87 ntBASIC2.59□□□□□ -1.99
UBP1Q9NZI7 AL603914.1-201ENST00000401964 204 ntBASIC2.59□□□□□ -1.99
UBP1Q9NZI7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.59□□□□□ -1.99
UBP1Q9NZI7 RNA5SP437-201ENST00000517249 129 ntBASIC2.59□□□□□ -1.99
UBP1Q9NZI7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
UBP1Q9NZI7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
UBP1Q9NZI7 AC062016.1-201ENST00000355719 319 ntBASIC2.58□□□□□ -2
UBP1Q9NZI7 Y_RNA.52-201ENST00000362760 96 ntBASIC2.58□□□□□ -2
UBP1Q9NZI7 Y_RNA.127-201ENST00000363386 109 ntBASIC2.58□□□□□ -2
UBP1Q9NZI7 SNORA4.2-201ENST00000365313 147 ntBASIC2.58□□□□□ -2
UBP1Q9NZI7 RNU6-424P-201ENST00000384367 105 ntBASIC2.58□□□□□ -2
UBP1Q9NZI7 SNORD38C-201ENST00000384381 69 ntBASIC2.58□□□□□ -2
UBP1Q9NZI7 MIR196B-201ENST00000384852 84 ntBASIC2.58□□□□□ -2
UBP1Q9NZI7 MIR4709-201ENST00000577272 72 ntBASIC2.58□□□□□ -2
UBP1Q9NZI7 AL365222.1-201ENST00000614661 98 ntBASIC2.58□□□□□ -2
UBP1Q9NZI7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.58□□□□□ -2
UBP1Q9NZI7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
UBP1Q9NZI7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
UBP1Q9NZI7 RNU6-833P-201ENST00000363486 107 ntBASIC2.57□□□□□ -2
UBP1Q9NZI7 Y_RNA.218-201ENST00000364218 104 ntBASIC2.57□□□□□ -2
UBP1Q9NZI7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.57□□□□□ -2
UBP1Q9NZI7 SUMO1P4-201ENST00000429430 302 ntBASIC2.57□□□□□ -2
UBP1Q9NZI7 CALM2P4-201ENST00000430810 426 ntBASIC2.57□□□□□ -2
UBP1Q9NZI7 snoU13.27-201ENST00000459278 104 ntBASIC2.57□□□□□ -2
UBP1Q9NZI7 RNU4-57P-201ENST00000515980 135 ntBASIC2.57□□□□□ -2
UBP1Q9NZI7 SCARNA16.3-201ENST00000516595 184 ntBASIC2.57□□□□□ -2
UBP1Q9NZI7 RNU2-19P-201ENST00000517288 84 ntBASIC2.57□□□□□ -2
UBP1Q9NZI7 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.57□□□□□ -2
UBP1Q9NZI7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.57□□□□□ -2
UBP1Q9NZI7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.57□□□□□ -2
UBP1Q9NZI7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.57□□□□□ -2
UBP1Q9NZI7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
UBP1Q9NZI7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
UBP1Q9NZI7 SNORD115-28-201ENST00000363931 81 ntBASIC2.56□□□□□ -2
UBP1Q9NZI7 Y_RNA.510-201ENST00000384511 114 ntBASIC2.56□□□□□ -2
UBP1Q9NZI7 SNORD77.3-201ENST00000391113 65 ntBASIC2.56□□□□□ -2
UBP1Q9NZI7 RNA5SP100-201ENST00000410903 110 ntBASIC2.56□□□□□ -2
UBP1Q9NZI7 RNA5SP59-201ENST00000410922 110 ntBASIC2.56□□□□□ -2
UBP1Q9NZI7 RNU7-34P-201ENST00000459394 64 ntBASIC2.56□□□□□ -2
UBP1Q9NZI7 RNU7-25P-201ENST00000516544 62 ntBASIC2.56□□□□□ -2
UBP1Q9NZI7 RNA5SP168-201ENST00000516642 112 ntBASIC2.56□□□□□ -2
UBP1Q9NZI7 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.56□□□□□ -2
UBP1Q9NZI7 MIR3670-2-201ENST00000582974 65 ntBASIC2.56□□□□□ -2
UBP1Q9NZI7 MIR3670-1-201ENST00000584160 65 ntBASIC2.56□□□□□ -2
UBP1Q9NZI7 MIR3670-3-201ENST00000584855 65 ntBASIC2.56□□□□□ -2
UBP1Q9NZI7 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.56□□□□□ -2
UBP1Q9NZI7 MIR3670-4-201ENST00000612260 65 ntBASIC2.56□□□□□ -2
UBP1Q9NZI7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.56□□□□□ -2
UBP1Q9NZI7 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.56□□□□□ -2
UBP1Q9NZI7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.56□□□□□ -2
UBP1Q9NZI7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.56□□□□□ -2
UBP1Q9NZI7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.55□□□□□ -2
UBP1Q9NZI7 AL442644.1-201ENST00000454390 3105 ntBASIC2.55□□□□□ -2
UBP1Q9NZI7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
UBP1Q9NZI7 SNORA22C-201ENST00000384614 134 ntBASIC2.55□□□□□ -2
UBP1Q9NZI7 Y_RNA.547-201ENST00000384654 119 ntBASIC2.55□□□□□ -2
UBP1Q9NZI7 U8.16-201ENST00000391279 133 ntBASIC2.55□□□□□ -2
UBP1Q9NZI7 RNA5SP184-201ENST00000411071 108 ntBASIC2.55□□□□□ -2
UBP1Q9NZI7 AF228730.3-201ENST00000436691 102 ntBASIC2.55□□□□□ -2
UBP1Q9NZI7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.55□□□□□ -2
UBP1Q9NZI7 RN7SKP179-201ENST00000516126 217 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms