Protein–RNA interactions for Protein: Q9NY46

SCN3A, Sodium channel protein type 3 subunit alpha, humanhuman

Predictions only

Length 2,000 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3AQ9NY46 AC097520.1-201ENST00000624435 385 ntBASIC-0.31□□□□□ -2.46
SCN3AQ9NY46 SNORD114-28-201ENST00000363610 72 ntBASIC-0.31□□□□□ -2.46
SCN3AQ9NY46 SNORD45.3-201ENST00000363836 72 ntBASIC-0.31□□□□□ -2.46
SCN3AQ9NY46 RNA5SP118-201ENST00000410385 109 ntBASIC-0.31□□□□□ -2.46
SCN3AQ9NY46 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.31□□□□□ -2.46
SCN3AQ9NY46 RNU7-165P-201ENST00000458864 60 ntBASIC-0.31□□□□□ -2.46
SCN3AQ9NY46 AC091959.1-201ENST00000495857 238 ntBASIC-0.31□□□□□ -2.46
SCN3AQ9NY46 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.31□□□□□ -2.46
SCN3AQ9NY46 RNU2-12P-201ENST00000517216 168 ntBASIC-0.31□□□□□ -2.46
SCN3AQ9NY46 AC008608.1-201ENST00000603910 127 ntBASIC-0.31□□□□□ -2.46
SCN3AQ9NY46 AP000942.4-201ENST00000604811 241 ntBASIC-0.31□□□□□ -2.46
SCN3AQ9NY46 AC127459.3-201ENST00000624328 466 ntBASIC-0.31□□□□□ -2.46
SCN3AQ9NY46 RNU6-596P-201ENST00000365395 98 ntBASIC-0.32□□□□□ -2.46
SCN3AQ9NY46 AL031003.1-201ENST00000404229 172 ntBASIC-0.32□□□□□ -2.46
SCN3AQ9NY46 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.32□□□□□ -2.46
SCN3AQ9NY46 RNU7-73P-201ENST00000458743 63 ntBASIC-0.32□□□□□ -2.46
SCN3AQ9NY46 LRRC34P1-201ENST00000542742 915 ntBASIC-0.32□□□□□ -2.46
SCN3AQ9NY46 AC006600.1-201ENST00000572529 153 ntBASIC-0.32□□□□□ -2.46
SCN3AQ9NY46 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.32□□□□□ -2.46
SCN3AQ9NY46 DISC2.1-201ENST00000612827 205 ntBASIC-0.32□□□□□ -2.46
SCN3AQ9NY46 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 RNU4-21P-201ENST00000362802 126 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 RNA5SP117-201ENST00000365294 118 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 AL353193.1-201ENST00000421444 268 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 AC015818.7-201ENST00000428754 109 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 AC087499.7-201ENST00000441958 109 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 SNORD4A-201ENST00000459174 72 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 RNU2-13P-201ENST00000515909 113 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 RNU6-566P-201ENST00000516790 107 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 MIR548AD-201ENST00000584780 82 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 MIR8055-201ENST00000610739 97 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 SNORA36.1-201ENST00000363424 132 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 SNORA32.1-201ENST00000364514 115 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 MT-TQ-201ENST00000387372 72 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 RNU6-747P-201ENST00000390928 104 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 RNU6-241P-201ENST00000391148 104 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 RNU6-447P-201ENST00000410293 104 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 RNU6-355P-201ENST00000410427 104 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 RNU6-791P-201ENST00000410467 104 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 RNU6-705P-201ENST00000410601 104 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 RNU6-860P-201ENST00000410860 104 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 RNU6-785P-201ENST00000411324 104 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 RNU7-129P-201ENST00000516128 62 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 SNORA18.4-201ENST00000516440 124 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 U6.90-201ENST00000614007 104 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 U6.70-201ENST00000620287 104 ntBASIC-0.33□□□□□ -2.46
SCN3AQ9NY46 RNA5SP98-201ENST00000363158 137 ntBASIC-0.34□□□□□ -2.46
SCN3AQ9NY46 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.34□□□□□ -2.46
SCN3AQ9NY46 RNU6-553P-201ENST00000364047 96 ntBASIC-0.34□□□□□ -2.46
SCN3AQ9NY46 RNU6-535P-201ENST00000384722 107 ntBASIC-0.34□□□□□ -2.46
SCN3AQ9NY46 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.34□□□□□ -2.46
SCN3AQ9NY46 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.34□□□□□ -2.46
SCN3AQ9NY46 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.34□□□□□ -2.46
SCN3AQ9NY46 MTCO1P5-201ENST00000433573 344 ntBASIC-0.34□□□□□ -2.46
SCN3AQ9NY46 SEPT14P3-201ENST00000439401 183 ntBASIC-0.34□□□□□ -2.46
SCN3AQ9NY46 AL732372.2-207ENST00000445840 183 ntBASIC-0.34□□□□□ -2.46
SCN3AQ9NY46 SEPT14P2-201ENST00000453405 183 ntBASIC-0.34□□□□□ -2.46
SCN3AQ9NY46 RNU6-329P-201ENST00000459618 107 ntBASIC-0.34□□□□□ -2.46
SCN3AQ9NY46 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.34□□□□□ -2.46
SCN3AQ9NY46 SEPT14P4-201ENST00000513445 186 ntBASIC-0.34□□□□□ -2.46
SCN3AQ9NY46 FO082796.1-201ENST00000523795 183 ntBASIC-0.34□□□□□ -2.46
SCN3AQ9NY46 MTND1P24-201ENST00000552175 861 ntBASIC-0.34□□□□□ -2.46
SCN3AQ9NY46 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.34□□□□□ -2.46
SCN3AQ9NY46 MIR548AX-201ENST00000580117 73 ntBASIC-0.34□□□□□ -2.46
SCN3AQ9NY46 MTND1P7-201ENST00000632801 297 ntBASIC-0.34□□□□□ -2.46
SCN3AQ9NY46 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.35□□□□□ -2.46
SCN3AQ9NY46 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.35□□□□□ -2.46
SCN3AQ9NY46 RNU6-842P-201ENST00000384269 107 ntBASIC-0.35□□□□□ -2.46
SCN3AQ9NY46 MTND2P39-201ENST00000457230 764 ntBASIC-0.35□□□□□ -2.46
SCN3AQ9NY46 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.35□□□□□ -2.46
SCN3AQ9NY46 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.35□□□□□ -2.46
SCN3AQ9NY46 MIR4639-201ENST00000584938 69 ntBASIC-0.35□□□□□ -2.46
SCN3AQ9NY46 AL355297.3-201ENST00000604082 446 ntBASIC-0.35□□□□□ -2.46
SCN3AQ9NY46 AC092794.2-201ENST00000620933 563 ntBASIC-0.35□□□□□ -2.46
SCN3AQ9NY46 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.35□□□□□ -2.47
SCN3AQ9NY46 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.35□□□□□ -2.47
SCN3AQ9NY46 SNORA63C-201ENST00000364578 129 ntBASIC-0.35□□□□□ -2.47
SCN3AQ9NY46 RNU6-726P-201ENST00000364680 107 ntBASIC-0.35□□□□□ -2.47
SCN3AQ9NY46 RNU6-318P-201ENST00000384283 103 ntBASIC-0.35□□□□□ -2.47
SCN3AQ9NY46 MIR604-201ENST00000384880 94 ntBASIC-0.35□□□□□ -2.47
SCN3AQ9NY46 MIR644A-201ENST00000385262 94 ntBASIC-0.35□□□□□ -2.47
SCN3AQ9NY46 RPL30P15-201ENST00000457129 321 ntBASIC-0.35□□□□□ -2.47
SCN3AQ9NY46 MIR4273-201ENST00000582824 84 ntBASIC-0.35□□□□□ -2.47
SCN3AQ9NY46 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.35□□□□□ -2.47
SCN3AQ9NY46 RNU4-20P-201ENST00000365601 151 ntBASIC-0.36□□□□□ -2.47
SCN3AQ9NY46 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.36□□□□□ -2.47
SCN3AQ9NY46 SNORD12B-201ENST00000410433 91 ntBASIC-0.36□□□□□ -2.47
SCN3AQ9NY46 FCF1P9-201ENST00000412546 282 ntBASIC-0.36□□□□□ -2.47
SCN3AQ9NY46 SNRPGP10-201ENST00000432323 225 ntBASIC-0.36□□□□□ -2.47
SCN3AQ9NY46 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 343.6 ms