Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 MIR8063-201ENST00000621930 81 ntBASIC1.54□□□□□ -2.16
HINT3Q9NQE9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.20-201ENST00000362479 113 ntBASIC1.53□□□□□ -2.16
HINT3Q9NQE9 RNU6-163P-201ENST00000384396 106 ntBASIC1.53□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.539-201ENST00000384635 107 ntBASIC1.53□□□□□ -2.16
HINT3Q9NQE9 RNU6-131P-201ENST00000391144 107 ntBASIC1.53□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.638-201ENST00000459374 113 ntBASIC1.53□□□□□ -2.16
HINT3Q9NQE9 CYCTP-201ENST00000504253 315 ntBASIC1.53□□□□□ -2.16
HINT3Q9NQE9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.53□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.714-201ENST00000517065 90 ntBASIC1.53□□□□□ -2.16
HINT3Q9NQE9 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.53□□□□□ -2.16
HINT3Q9NQE9 RPL23AP91-201ENST00000569211 455 ntBASIC1.53□□□□□ -2.16
HINT3Q9NQE9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.53□□□□□ -2.16
HINT3Q9NQE9 MIR4724-201ENST00000579485 89 ntBASIC1.53□□□□□ -2.16
HINT3Q9NQE9 MIR4524B-201ENST00000581569 115 ntBASIC1.53□□□□□ -2.16
HINT3Q9NQE9 Y_RNA.802-201ENST00000614892 130 ntBASIC1.53□□□□□ -2.16
HINT3Q9NQE9 AC084768.2-201ENST00000622736 221 ntBASIC1.53□□□□□ -2.16
HINT3Q9NQE9 MIR302D-201ENST00000362275 68 ntBASIC1.52□□□□□ -2.17
HINT3Q9NQE9 MIR367-201ENST00000362299 68 ntBASIC1.52□□□□□ -2.17
HINT3Q9NQE9 Y_RNA.60-201ENST00000362831 98 ntBASIC1.52□□□□□ -2.17
HINT3Q9NQE9 Y_RNA.76-201ENST00000362931 109 ntBASIC1.52□□□□□ -2.17
HINT3Q9NQE9 RNU4-10P-201ENST00000364383 140 ntBASIC1.52□□□□□ -2.17
HINT3Q9NQE9 RNU6-338P-201ENST00000383888 105 ntBASIC1.52□□□□□ -2.17
HINT3Q9NQE9 MIR526A2-201ENST00000390198 65 ntBASIC1.52□□□□□ -2.17
HINT3Q9NQE9 MIR764-201ENST00000390811 85 ntBASIC1.52□□□□□ -2.17
HINT3Q9NQE9 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.52□□□□□ -2.17
HINT3Q9NQE9 PIGPP3-201ENST00000425307 415 ntBASIC1.52□□□□□ -2.17
HINT3Q9NQE9 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.52□□□□□ -2.17
HINT3Q9NQE9 AC015712.3-201ENST00000559380 164 ntBASIC1.52□□□□□ -2.17
HINT3Q9NQE9 AC027279.3-201ENST00000625055 122 ntBASIC1.52□□□□□ -2.17
HINT3Q9NQE9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.52□□□□□ -2.17
HINT3Q9NQE9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.51□□□□□ -2.17
HINT3Q9NQE9 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HINT3Q9NQE9 RNU6-833P-201ENST00000363486 107 ntBASIC1.51□□□□□ -2.17
HINT3Q9NQE9 SNORD1A-201ENST00000364968 72 ntBASIC1.51□□□□□ -2.17
HINT3Q9NQE9 RNA5SP259-201ENST00000365541 109 ntBASIC1.51□□□□□ -2.17
HINT3Q9NQE9 Y_RNA.401-201ENST00000383965 117 ntBASIC1.51□□□□□ -2.17
HINT3Q9NQE9 SNORA8.3-201ENST00000384679 139 ntBASIC1.51□□□□□ -2.17
HINT3Q9NQE9 SNORD58.1-201ENST00000391313 66 ntBASIC1.51□□□□□ -2.17
HINT3Q9NQE9 MIR934-201ENST00000401241 83 ntBASIC1.51□□□□□ -2.17
HINT3Q9NQE9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.51□□□□□ -2.17
HINT3Q9NQE9 AC093850.1-201ENST00000454121 251 ntBASIC1.51□□□□□ -2.17
HINT3Q9NQE9 NDUFA4P2-201ENST00000489989 244 ntBASIC1.51□□□□□ -2.17
HINT3Q9NQE9 AC114811.1-201ENST00000507207 168 ntBASIC1.51□□□□□ -2.17
HINT3Q9NQE9 SNORD116-28-201ENST00000516123 91 ntBASIC1.51□□□□□ -2.17
HINT3Q9NQE9 RNU6-1023P-201ENST00000516137 106 ntBASIC1.51□□□□□ -2.17
HINT3Q9NQE9 SNORA25.15-201ENST00000516487 89 ntBASIC1.51□□□□□ -2.17
HINT3Q9NQE9 AC100767.1-201ENST00000528178 123 ntBASIC1.51□□□□□ -2.17
HINT3Q9NQE9 MIR5688-201ENST00000580619 83 ntBASIC1.51□□□□□ -2.17
HINT3Q9NQE9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.51□□□□□ -2.17
HINT3Q9NQE9 AC006006.1-201ENST00000603082 144 ntBASIC1.51□□□□□ -2.17
HINT3Q9NQE9 AL442067.1-201ENST00000613261 223 ntBASIC1.51□□□□□ -2.17
HINT3Q9NQE9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HINT3Q9NQE9 RNU6-1084P-201ENST00000362498 107 ntBASIC1.5□□□□□ -2.17
HINT3Q9NQE9 Y_RNA.65-201ENST00000362846 100 ntBASIC1.5□□□□□ -2.17
HINT3Q9NQE9 SNORA20.1-201ENST00000364790 130 ntBASIC1.5□□□□□ -2.17
HINT3Q9NQE9 Y_RNA.292-201ENST00000364904 97 ntBASIC1.5□□□□□ -2.17
HINT3Q9NQE9 SNORD50B-201ENST00000364995 70 ntBASIC1.5□□□□□ -2.17
HINT3Q9NQE9 Y_RNA.304-201ENST00000365011 112 ntBASIC1.5□□□□□ -2.17
HINT3Q9NQE9 snoU2-30.1-201ENST00000365012 70 ntBASIC1.5□□□□□ -2.17
HINT3Q9NQE9 MIR891A-201ENST00000401237 79 ntBASIC1.5□□□□□ -2.17
HINT3Q9NQE9 CYCSP49-201ENST00000420810 319 ntBASIC1.5□□□□□ -2.17
HINT3Q9NQE9 SNORD11-201ENST00000459124 84 ntBASIC1.5□□□□□ -2.17
HINT3Q9NQE9 SNORD45.4-201ENST00000516629 73 ntBASIC1.5□□□□□ -2.17
HINT3Q9NQE9 AC011921.3-201ENST00000605540 361 ntBASIC1.5□□□□□ -2.17
HINT3Q9NQE9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.5□□□□□ -2.17
HINT3Q9NQE9 AL365265.1-201ENST00000621045 234 ntBASIC1.5□□□□□ -2.17
HINT3Q9NQE9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.5□□□□□ -2.17
HINT3Q9NQE9 RNU6-199P-201ENST00000362954 107 ntBASIC1.49□□□□□ -2.17
HINT3Q9NQE9 Y_RNA.269-201ENST00000364685 89 ntBASIC1.49□□□□□ -2.17
HINT3Q9NQE9 MIR626-201ENST00000385032 94 ntBASIC1.49□□□□□ -2.17
HINT3Q9NQE9 RNA5SP496-201ENST00000391240 109 ntBASIC1.49□□□□□ -2.17
HINT3Q9NQE9 Y_RNA.618-201ENST00000410949 107 ntBASIC1.49□□□□□ -2.17
HINT3Q9NQE9 RN7SKP101-201ENST00000411376 320 ntBASIC1.49□□□□□ -2.17
HINT3Q9NQE9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.49□□□□□ -2.17
HINT3Q9NQE9 RNU6-250P-201ENST00000516958 103 ntBASIC1.49□□□□□ -2.17
HINT3Q9NQE9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.49□□□□□ -2.17
HINT3Q9NQE9 MIR3124-201ENST00000582636 67 ntBASIC1.49□□□□□ -2.17
HINT3Q9NQE9 AC087685.1-201ENST00000587507 141 ntBASIC1.49□□□□□ -2.17
HINT3Q9NQE9 MIR502-201ENST00000606349 86 ntBASIC1.49□□□□□ -2.17
HINT3Q9NQE9 AL021707.8-201ENST00000609428 183 ntBASIC1.49□□□□□ -2.17
HINT3Q9NQE9 MIR8081-201ENST00000611533 95 ntBASIC1.49□□□□□ -2.17
HINT3Q9NQE9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
HINT3Q9NQE9 AC106754.2-201ENST00000623006 233 ntBASIC1.49□□□□□ -2.17
HINT3Q9NQE9 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
HINT3Q9NQE9 Y_RNA.24-201ENST00000362508 103 ntBASIC1.48□□□□□ -2.17
HINT3Q9NQE9 RNU6-457P-201ENST00000363999 107 ntBASIC1.48□□□□□ -2.17
HINT3Q9NQE9 Y_RNA.572-201ENST00000384757 98 ntBASIC1.48□□□□□ -2.17
HINT3Q9NQE9 RNU1-78P-201ENST00000391248 165 ntBASIC1.48□□□□□ -2.17
HINT3Q9NQE9 AL627390.1-201ENST00000396055 340 ntBASIC1.48□□□□□ -2.17
HINT3Q9NQE9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.48□□□□□ -2.17
HINT3Q9NQE9 AC079140.2-201ENST00000506193 142 ntBASIC1.48□□□□□ -2.17
HINT3Q9NQE9 RNU6-111P-201ENST00000517179 105 ntBASIC1.48□□□□□ -2.17
HINT3Q9NQE9 AL365434.2-201ENST00000607979 234 ntBASIC1.48□□□□□ -2.17
HINT3Q9NQE9 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.48□□□□□ -2.17
HINT3Q9NQE9 SNORD33-201ENST00000362761 85 ntBASIC1.47□□□□□ -2.17
HINT3Q9NQE9 Y_RNA.188-201ENST00000363952 111 ntBASIC1.47□□□□□ -2.17
HINT3Q9NQE9 RNY4P28-201ENST00000365281 93 ntBASIC1.47□□□□□ -2.17
HINT3Q9NQE9 RN7SKP51-201ENST00000410781 304 ntBASIC1.47□□□□□ -2.17
HINT3Q9NQE9 AC023449.1-201ENST00000454464 154 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms