Protein–RNA interactions for Protein: Q9NP99

TREM1, Triggering receptor expressed on myeloid cells 1, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1Q9NP99 AC010332.2-201ENST00000613083 1904 ntBASIC-0.48□□□□□ -2.49
TREM1Q9NP99 SNORD114-31-201ENST00000363219 75 ntBASIC-0.48□□□□□ -2.49
TREM1Q9NP99 RNU6-268P-201ENST00000364174 107 ntBASIC-0.48□□□□□ -2.49
TREM1Q9NP99 SNORA32.3-201ENST00000384772 121 ntBASIC-0.48□□□□□ -2.49
TREM1Q9NP99 MIR760-201ENST00000390220 80 ntBASIC-0.48□□□□□ -2.49
TREM1Q9NP99 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.48□□□□□ -2.49
TREM1Q9NP99 MTATP6P19-201ENST00000413797 659 ntBASIC-0.48□□□□□ -2.49
TREM1Q9NP99 AL512326.2-201ENST00000426359 151 ntBASIC-0.48□□□□□ -2.49
TREM1Q9NP99 SEPT14P3-201ENST00000439401 183 ntBASIC-0.48□□□□□ -2.49
TREM1Q9NP99 AL732372.2-207ENST00000445840 183 ntBASIC-0.48□□□□□ -2.49
TREM1Q9NP99 SEPT14P2-201ENST00000453405 183 ntBASIC-0.48□□□□□ -2.49
TREM1Q9NP99 SNORD126-201ENST00000459475 77 ntBASIC-0.48□□□□□ -2.49
TREM1Q9NP99 SEPT14P4-201ENST00000513445 186 ntBASIC-0.48□□□□□ -2.49
TREM1Q9NP99 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.48□□□□□ -2.49
TREM1Q9NP99 FO082796.1-201ENST00000523795 183 ntBASIC-0.48□□□□□ -2.49
TREM1Q9NP99 MIR8064-201ENST00000612863 90 ntBASIC-0.48□□□□□ -2.49
TREM1Q9NP99 AC004467.1-201ENST00000615678 330 ntBASIC-0.48□□□□□ -2.49
TREM1Q9NP99 SNORD38B-202ENST00000625943 69 ntBASIC-0.48□□□□□ -2.49
TREM1Q9NP99 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.49□□□□□ -2.49
TREM1Q9NP99 SNORD114-12-201ENST00000365400 75 ntBASIC-0.49□□□□□ -2.49
TREM1Q9NP99 SNORA26-201ENST00000391286 122 ntBASIC-0.49□□□□□ -2.49
TREM1Q9NP99 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.49□□□□□ -2.49
TREM1Q9NP99 RNU6-855P-201ENST00000410395 104 ntBASIC-0.49□□□□□ -2.49
TREM1Q9NP99 Y_RNA.615-201ENST00000410769 117 ntBASIC-0.49□□□□□ -2.49
TREM1Q9NP99 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.49□□□□□ -2.49
TREM1Q9NP99 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.49□□□□□ -2.49
TREM1Q9NP99 CHEK2P4-201ENST00000450340 246 ntBASIC-0.49□□□□□ -2.49
TREM1Q9NP99 Y_RNA.695-201ENST00000516715 107 ntBASIC-0.49□□□□□ -2.49
TREM1Q9NP99 IGLVI-20-201ENST00000519296 130 ntBASIC-0.49□□□□□ -2.49
TREM1Q9NP99 MIR4645-201ENST00000583158 77 ntBASIC-0.49□□□□□ -2.49
TREM1Q9NP99 AL670379.3-201ENST00000605040 251 ntBASIC-0.49□□□□□ -2.49
TREM1Q9NP99 DISC2.1-201ENST00000612827 205 ntBASIC-0.49□□□□□ -2.49
TREM1Q9NP99 uc_338.36-201ENST00000622331 158 ntBASIC-0.49□□□□□ -2.49
TREM1Q9NP99 SNORA18.1-201ENST00000363418 128 ntBASIC-0.5□□□□□ -2.49
TREM1Q9NP99 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.5□□□□□ -2.49
TREM1Q9NP99 RNU6-923P-201ENST00000364753 107 ntBASIC-0.5□□□□□ -2.49
TREM1Q9NP99 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.5□□□□□ -2.49
TREM1Q9NP99 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.5□□□□□ -2.49
TREM1Q9NP99 RNU6-318P-201ENST00000384283 103 ntBASIC-0.5□□□□□ -2.49
TREM1Q9NP99 SNORA26.5-201ENST00000391215 123 ntBASIC-0.5□□□□□ -2.49
TREM1Q9NP99 RNU6-192P-201ENST00000391253 100 ntBASIC-0.5□□□□□ -2.49
TREM1Q9NP99 AC090844.1-201ENST00000422019 156 ntBASIC-0.5□□□□□ -2.49
TREM1Q9NP99 MTND3P21-201ENST00000433774 331 ntBASIC-0.5□□□□□ -2.49
TREM1Q9NP99 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.5□□□□□ -2.49
TREM1Q9NP99 RNU7-165P-201ENST00000458864 60 ntBASIC-0.5□□□□□ -2.49
TREM1Q9NP99 RNA5SP480-201ENST00000516840 109 ntBASIC-0.5□□□□□ -2.49
TREM1Q9NP99 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.5□□□□□ -2.49
TREM1Q9NP99 MIR7107-201ENST00000611489 80 ntBASIC-0.5□□□□□ -2.49
TREM1Q9NP99 JPX_2.1-201ENST00000614161 69 ntBASIC-0.5□□□□□ -2.49
TREM1Q9NP99 AC022306.2-201ENST00000617563 647 ntBASIC-0.5□□□□□ -2.49
TREM1Q9NP99 MIR6740-201ENST00000618268 113 ntBASIC-0.5□□□□□ -2.49
TREM1Q9NP99 Y_RNA.414-201ENST00000384011 101 ntBASIC-0.51□□□□□ -2.49
TREM1Q9NP99 MIR196A2-201ENST00000385189 110 ntBASIC-0.51□□□□□ -2.49
TREM1Q9NP99 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.51□□□□□ -2.49
TREM1Q9NP99 RNU6-956P-201ENST00000458868 103 ntBASIC-0.51□□□□□ -2.49
TREM1Q9NP99 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-0.51□□□□□ -2.49
TREM1Q9NP99 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.51□□□□□ -2.49
TREM1Q9NP99 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.51□□□□□ -2.49
TREM1Q9NP99 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.51□□□□□ -2.49
TREM1Q9NP99 AC105029.1-201ENST00000520250 669 ntBASIC-0.51□□□□□ -2.49
TREM1Q9NP99 AC073114.1-201ENST00000612027 490 ntBASIC-0.51□□□□□ -2.49
TREM1Q9NP99 MIR548AZ-201ENST00000616567 95 ntBASIC-0.51□□□□□ -2.49
TREM1Q9NP99 FTX_2.1-201ENST00000618816 94 ntBASIC-0.51□□□□□ -2.49
TREM1Q9NP99 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.52□□□□□ -2.49
TREM1Q9NP99 SNORD38B-201ENST00000384690 67 ntBASIC-0.52□□□□□ -2.49
TREM1Q9NP99 RNU6-269P-201ENST00000391077 97 ntBASIC-0.52□□□□□ -2.49
TREM1Q9NP99 SNORD12B-201ENST00000410433 91 ntBASIC-0.52□□□□□ -2.49
TREM1Q9NP99 AC107297.1-201ENST00000459991 176 ntBASIC-0.52□□□□□ -2.49
TREM1Q9NP99 RNU6-782P-201ENST00000516852 104 ntBASIC-0.52□□□□□ -2.49
TREM1Q9NP99 RNU7-116P-201ENST00000516940 62 ntBASIC-0.52□□□□□ -2.49
TREM1Q9NP99 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.52□□□□□ -2.49
TREM1Q9NP99 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.52□□□□□ -2.49
TREM1Q9NP99 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.53□□□□□ -2.49
TREM1Q9NP99 SNORA24-201ENST00000384096 131 ntBASIC-0.53□□□□□ -2.49
TREM1Q9NP99 MIR518F-201ENST00000384973 87 ntBASIC-0.53□□□□□ -2.49
TREM1Q9NP99 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.53□□□□□ -2.49
TREM1Q9NP99 MTND4LP11-201ENST00000422184 280 ntBASIC-0.53□□□□□ -2.49
TREM1Q9NP99 HMGN2P22-201ENST00000427588 175 ntBASIC-0.53□□□□□ -2.49
TREM1Q9NP99 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.53□□□□□ -2.49
TREM1Q9NP99 Y_RNA.693-201ENST00000516641 110 ntBASIC-0.53□□□□□ -2.49
TREM1Q9NP99 RNU1-54P-201ENST00000517181 120 ntBASIC-0.53□□□□□ -2.49
TREM1Q9NP99 AC134878.1-201ENST00000619901 243 ntBASIC-0.53□□□□□ -2.49
TREM1Q9NP99 MIR6828-201ENST00000636181 60 ntBASIC-0.53□□□□□ -2.49
TREM1Q9NP99 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.54□□□□□ -2.5
TREM1Q9NP99 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.54□□□□□ -2.5
TREM1Q9NP99 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.54□□□□□ -2.5
TREM1Q9NP99 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.54□□□□□ -2.5
TREM1Q9NP99 MTND1P24-201ENST00000552175 861 ntBASIC-0.54□□□□□ -2.5
TREM1Q9NP99 DLEU2_1.1-201ENST00000612089 120 ntBASIC-0.54□□□□□ -2.5
TREM1Q9NP99 AC006441.5-201ENST00000612680 209 ntBASIC-0.54□□□□□ -2.5
TREM1Q9NP99 DLEU2_1.2-201ENST00000614667 120 ntBASIC-0.54□□□□□ -2.5
TREM1Q9NP99 RNU6-1059P-201ENST00000363752 98 ntBASIC-0.55□□□□□ -2.5
TREM1Q9NP99 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.55□□□□□ -2.5
TREM1Q9NP99 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.55□□□□□ -2.5
TREM1Q9NP99 RNU6-842P-201ENST00000384269 107 ntBASIC-0.55□□□□□ -2.5
TREM1Q9NP99 RNA5SP300-201ENST00000391197 107 ntBASIC-0.55□□□□□ -2.5
TREM1Q9NP99 RNA5SP163-201ENST00000410304 99 ntBASIC-0.55□□□□□ -2.5
TREM1Q9NP99 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.55□□□□□ -2.5
TREM1Q9NP99 USP9YP30-201ENST00000430729 455 ntBASIC-0.55□□□□□ -2.5
TREM1Q9NP99 SNORD5.1-201ENST00000458800 75 ntBASIC-0.55□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms